Information report for AT5G06460
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- The ubiquitin-activating enzyme (E1) gene family in Arabidopsis thaliana. DOI: 10.1046/j.1365-313x.1997.11020213.x ; PMID: 9076989
- Ubiquitylation in plants: a post-genomic look at a post-translational modification. DOI: 10.1016/s1360-1385(01)02080-5 ; PMID: 11590065
- Protein degradation in signaling. DOI: 10.1016/s1369-5266(00)00100-x ; PMID: 11019805
- The ubiquitin pathway is required for innate immunity in Arabidopsis. DOI: 10.1111/j.1365-313X.2006.02978.x ; PMID: 17217463
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- The ubiquitin-activating enzyme (E1) gene family in Arabidopsis thaliana. DOI: 10.1046/j.1365-313x.1997.11020213.x ; PMID: 9076989
- Protein degradation in signaling. DOI: 10.1016/s1369-5266(00)00100-x ; PMID: 11019805
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178UEQ1
- EMBL: CACRSJ010000110, CACSHJ010000096, LUHQ01000005
- AlphaFoldDB: A0A178UEQ1
- EnsemblPlants: AT5G06460.1
- Gramene: AT5G06460.1
- KEGG: ath:AT5G06460
- Orthologous matrix: WVKSPSK
- ExpressionAtlas: AT5G06460
- InterPro: IPR000011, IPR000594, IPR018074
- PANTHER: PTHR10953, PTHR10953:SF162
- SUPFAM: SSF69572
- PROSITE: PS00536, PS00865
- Gene3D: 1.10.10.2660, 2.40.30.180, 3.10.290.60
- OrthoDB: A0A178UEQ1
- SWISS-MODEL: A0A178UEQ1
- Conserved Domain Database: cd01490, cd01491
Sequences
cDNA Sequence
- >AT5G06460.1
TTTTTGTTATATACCGCCGCTTCTTTCTACACAACCTACAAAGCCAAAAGCTTAGTATACTCTCTCTTTCTACTTTAACAACAAATTCGCCGCTTATCGCCTCCGATCTTCTCTCAAAGTTACTCTATATGGAACCATTCGTTGTTAAGGAGAACATCATCGCATCTGCTTCTTCGCCGATGAAGAAGCGACGGATCGATCACACTGAGTCAGCTGATGGTTCTGCGATTAACGCTTCTAACTCCAGTAGCATCGGTTTGAACAACAGCATCGGTGGTAACGATACGGTGATGAGCATGGCGGAGTTTGGTAACGACAACTCCAACAATCAGGAGATCGATGAAGATCTTCATAGCAGACAGCTCGCCGTTTACGGCCGTGAGACTATGAGGAAGCTTTTCGCTTCCAACGTTCTCATCTCTGGGATGCAGGGCCTTGGTGTTGAGATTGCCAAGAATATTATTCTAGCTGGTGTGAAGTCAGTGACCCTTCACGATGAAAATGTGGTTGAGCTATGGGACCTATCTAGTAACTTTGTTTTCACGGAGGAGGACATTGGTAAGAATAGAGCACTTGCTTCTGTTCACAAGTTGCAAGAACTCAACAATGCTGTGGCTGTCTCAACTTTGACTGGGAAGTTAACCAAAGAGCAGCTTTCTGATTTCCAGGTTGTGGTATTTGTGGATATCTCTTTTGAGAAAGCGACAGAGATTGATGATTATTGTCACAGTCATCAGCCTCCTATTGCATTCATCAAGGCTGATGTTAGGGGGCTGTTTGGGTCTTTGTTTTGTGATTTTGGACCTCATTTTACTGTTCTTGATGTTGATGGGGAGGAACCTCACTCTGGCATCATCGCTTCTGTTAGCAATGAAAATCCTGGATTTGTTTCGTGTGTCGATGATGAGAGGCTCGAGTTTGAAGATGGAAATTTGGTTGTTTTCTCTGAAGTTGAGGGAATGACAGAGCTAAATGATGGAAAACCAAGGAAGATAAAAAATGTCAAGCCATTTTCATTTACCCTGGAGGAAGACACCTCTAGCTATGGGCAATATATGAAGGGTGGCATTGTGACTCAGGTTAAACAACCAAAGGTGTTGAACTTTAAACCTCTTAGAGAAGCACTTAAAGATCCAGGCGACTTTCTTCTAAGTGACTTTTCAAAGTTTGACCGACCACCTCTTCTCCACTTAGCATTCCAAGCACTTGATAGGTTTTCGTCTCAAGCAGGCCGATTTCCGTTTGCTGGTTCAGAAGAAGATGCTCAGAAACTAGTGGAAATTGCAGTTGACATTAATGAGGGTTTGGGTGATGCAAGGTTGGAAGATGTCAACTCTAAACTGTTGCGGCATTTGGCCTTTGGATCCAGGGCTGTTCTGAATCCTATGGCTGCAATGTTTGGTGGCATTGTTGGGCAGGAGGTTGTCAAGGCATGCTCTGGGAAATTCCATCCTATCTTTCAGTTCTTTTACTTTGATTCGGTGGAGTCACTCCCCAAGGAACCTCTTGATGCATCAGAGTTTAGACCACAAAATAGCCGTTACGATGCACAGATCTCTGTATTTGGGTCTACTCTTCAGAAGAAACTCGAGGATGCCAGAGTTTTTGTTGTAGGGGCTGGTGCTCTTGGATGCGAGTTCTTAAAGAACTTGGCTTTGATGGGTGTGTCATGTGGCACCCAAGGGAAGCTAACTGTCACCGATGATGATGTAATTGAGAAGAGCAACCTGAGTCGTCAGTTTCTTTTTCGAGATTGGAACATAGGACAGGCTAAATCCACAGTTGCCGCAACAGCAGCAGCTGGAATAAATTCTCGCCTCAACATTGATGCTCTGCAAAATCGTGTTGGACCTGAGACCGAGAATGTCTTTGACGACAGCTTCTGGGAGAATTTGACAGTTGTGGTGAACGCTTTGGACAATGTCACTGCAAGGCTTTATGTTGATTCAAGGTGTGTGTATTTCCAGAAGCCTCTCCTCGAGTCAGGAACCCTAGGTGCAAAGTGCAACACACAGATGGTTATCCCTCACCTCACTGAGAACTATGGTGCCTCGAGAGACCCACCAGAGAAACAGGCTCCAATGTGCACCGTGCACTCATTTCCTCACAACATTGATCATTGCTTAACATGGGCTCGCTCTGAATTTGAGGGTTTGCTTGAGAAAACACCAGCTGAAGTTAATGCATACCTCTCAGATCCTGTTGAATACATGAAAGCGATGAGAACTGCTGGTGATGCCCAAGCAAGGGATACTTTGGGACGTGTTGTTGAGTGCCTCGAGAAAGAAAAGTGCAATTCATTCCAGGATTGCATAACCTGGGCTCGTCTGAGGTTTGAGGACTACTTCGCCAACCGTGTGAAGCAGTTATGTTACACATTTCCTGAGGATGCTGCTACTAGTACAGGAGCTCCGTTCTGGTCTGCCCCAAAGAGATTTCCTCGCCCACTCCAATTCTCCTCAACCGACCTGAGCCATATCAACTTTGTCATGGCTGCATCTATCTTGCGAGCAGAGACATTCGGAATCCCTACTCCTGAGTGGGCTAAAACCCGAGCAGGACTAGCCGAGGCTGTGGAAAGAGTAATTGTCCCCGACTTTGAGCCGAAGAAAGATGCAACTATTGTGACAGATGAGAAGGCTACAACTTTGTCTACAGCTTCAGTCGATGATGCAGCAGTAATCGATGAACTAAACGCAAAACTAGTGCGGTGCAGGATGAGCTTGCAGCCAGAGTTCAGGATGAAGGCAATCCAGTTTGAAAAGGACGATGATACCAACTACCACATGGATATGATCGCTGGGCTAGCCAACATGAGAGCAAGGAACTACAGTGTTCCCGAGGTGGACAAGCTTAAAGCCAAGTTCATAGCCGGAAGAATCATACCCGCGATTGCGACATCAACTGCAATGGCAACAGGTTTTGTTTGCCTTGAGATGTACAAGGTCTTAGACGGGTCACACAAAGTAGAAGACTACAGAAACACATTTGCTAACTTAGCACTTCCGCTCTTCTCCATGGCTGAGCCGGTTCCACCTAAAGTGGTGAAGCACCAAGACCAAAGCTGGACTGTTTGGGACCGGTGGGTGATGAGGGGAAACCCGACCCTAAGGGAGTTGCTAGACTGGCTAAAAGAGAAAGGGCTAAACGCATACAGCATATCTTGCGGAAGCAGTTTACTGTACAACAGTATGTTCTCAAGGCATAAAGAGAGGATGAACAGAAGAGTGGTGGATCTTGCAAGAGACGTGGCTGGGGTTGAATTGCCTGCTTATAGACGTCACGTGGATGTTGTAGTCGCTTGTGAAGATGATAATGATGCTGACGTTGATATCCCTCTCGTATCAGTCTACTTCGCCTGATTAGAGAATTTTAATTAACGTCCCCAACGAGAGAAGCTTTTAATAATTACTGTATTCTTGGGATATGAAGTTGAGTTTCAGAGATAGAGAGAGTTTTGATGTATGAGAATAGAGTTAACTTCTTAAAATTTAGAACTAAATTTTC
CDS Sequence
Protein Sequence