Gene Details:
- Gene ID: AT5G06340
- Gene Symbol: ATNUDX27, NUDT27, NUDX27
- Gene Name: nudix hydrolase homolog 27, nudix hydrolase homolog 27
- Description: nudix hydrolase homolog 27;(source:Araport11)
- TAIR Accession: locus:2164220
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0009507 — located in — chloroplast
- GO:0006753 — involved in — nucleoside phosphate metabolic process
- GO:0019693 — involved in — ribose phosphate metabolic process
- GO:0034432 — enables — bis(5-adenosyl)-pentaphosphatase activity
- GO:0110154 — enables — RNA decapping
- GO:0009507 — is active in — chloroplast
- GO:0016711 — enables — guanosine-3,5-bis(diphosphate) 3-diphosphatase activity
Function-related keywords:
Literature:
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Molecular characterization of organelle-type Nudix hydrolases in Arabidopsis. DOI: 10.1104/pp.108.128413 ; PMID: 18815383
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Arabidopsis thaliana NudiXes have RNA-decapping activity. DOI: 10.1039/d2cb00213b ; PMID: 36908703
- A diadenosine 5',5''-P1P4 tetraphosphate (Ap4A) hydrolase from Arabidopsis thaliana that is activated preferentially by Mn2+ ions. DOI: 20081590 ; PMID: 18345354
Sequences:
cDNA Sequence
- >AT5G06340.1
GTCTAAGCGGGTAAGGGTAGTGTCGTAATAATATATTTTATCACTAGTGAGAAAATTGAAACCAATCACCGATTGTTCTGAGCCGGACGAAGGAGAGGCAGCCGCCTAAGAAGTTGCCGTCGTGCGCCATGGCCGTGAAGGCTTCTGGATTCATTGGGAAATCAGCAATCTCTGTTCATCTAGATTTCTCTTCGTTTCCTGTGAAATTTTCATGCTTGAAACAGTTTTCTGTATCTTCACCAAAGCCACTGGTCGTTTTATCCGTTGCCTTATCGTCGCCGGCAAGAACAGTTGAGTCTCCGCCTGTTGGTTACCGGAAGAATGTTGGGATTTGTCTCGTTAGCCCATGTAGAAAGATTTTTACGGCGTCAAAGATTCACATTCCGGATACATGGCAGATGCCTCAGGGTGGTGCTGATGAGGGAGAAGATTTGAGGAACGCTGCCTTTAGAGAACTGAGAGAAGAAACAGGGGTTACTTCGGCAGAATTCATTGCGGAGATACCAAACTGGCTGACCTATGATTTTCCCCGAGAAGTAAAGGACAAACTAAACCGGAAATGGCGAACAAGTTACAAAGGCCAAGCTCAGAAGTGGTTTCTCTTTAAGTTCACGGGCAAGGAAGAAGAGATAAATCTCCTTGGAGACGGTACTGCAAAACCAGAGTTTAAGGTGTGGTCGTGGATGCTACCGGAACAAGTTATTGAACATGCTGTATATTTCAAGAGACCTGTTTATGAGCATGTCATAAAGCAATTCAACCCTTATTTTGTGGATGAAGAAAAGGATTCCATGAACTCGTCTAAGGATTGAATGTGCACAAAGATTCACCAAGTGAATACTGATTAGAAGCAAATCAATCAATTCATTATACTGGTTTCTCTTGAATCTCATCAAAAATAAAAATTCATGAATCTCAGACATTGATCTTGTAGTTTGATGCTATATATAAATCCTCACGAATTAAATTCACGAACTAAATTACCACATTAATAAATAATTAATTTACCCATAAATTACAACATTATGCTGATAC
CDS Sequence
Protein Sequence