Gene Details:
- Gene ID: AT5G06200
- Gene Symbol: CASP4
- Gene Name: Casparian strip membrane domain protein 4
- Description: Uncharacterized protein family (UPF0497);(source:Araport11)
- TAIR Accession: locus:2160747
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Gene Ontology:
- GO:0005515 — enables — protein binding
- GO:0005886 — is active in — plasma membrane
- GO:0007043 — involved in — cell-cell junction assembly
- GO:0042545 — involved in — cell wall modification
- GO:0048226 — is active in — Casparian strip
- GO:0042803 — enables — protein homodimerization activity
- GO:0048226 — located in — Casparian strip
- GO:0005886 — located in — plasma membrane
Function-related keywords:
Literature:
- A novel protein family mediates Casparian strip formation in the endodermis. DOI: 10.1038/nature10070 ; PMID: 21593871
- Functional and Evolutionary Analysis of the CASPARIAN STRIP MEMBRANE DOMAIN PROTEIN Family. DOI: 10.1104/pp.114.239137 ; PMID: 24920445
Sequences:
cDNA Sequence
- >AT5G06200.1
TTTTGTTGCCAACTCCATATCTTAGGGAAAAACAAAACAACAACTACTCTTTCTCTACTCCATTAACAAAGTCCACCATCAGAACCTAAACCCTATAAAAGCCATACACTCACAACAGCAAAAGCATCCAGTACCATTCCCCCCAAACAAGTACTTCAAGAAGATTGGTGAACACACTGAGAAAGTTAAAAGAGAAAAGATGAAGAGTGACTCAATCGCCGTTGATGTCCCTGCAGAGTCTAGCTCAGTCATCAAAGGCAAAGCTCCTCTCCTCGGTTTAGCCAGAGACCACACTGGCTCTGGAGGTTACAAGAGAGGCCTTTCCATTTTCGATTTCCTTCTCCGTTTAGCTGCCATTGTAGCTGCCTTAGCTGCTGCTGCCACAATGGGAACTAGTGACGAGACACTCCCTTTCTTCACTCAGTTTTTGCAGTTCGAAGCTAGCTACGATGATCTTCCAACTTTCCAGTTCTTTGTCGTTGCCATTGCAATAGTTGCAGGTTACCTTGTCCTGTCACTTCCCTTCTCAGTCGTCACAATTGTTCGTCCTCTAGCCGTCGCTCCGAGACTTCTCTTGCTTGTTCTTGACACTGCGGCTCTGGCTTTGGACACTGCAGCTGCTTCCGCGGCAGCGGCTATAGTGTATTTGGCACACAATGGGAATACGAACACAAACTGGCTTCCAATCTGCCAACAGTTTGGAGATTTCTGTCAGAAAACGAGCGGAGCTGTGGTTTCTGCCTTTGCCTCTGTCACCTTTTTAGCCATCCTTGTCGTTATCTCCGGTGTTTCTCTCAAACGACCCTAAGTCAACAATACAGACTCTTTGAGCGCAAGAAGAAGCATTGCCAAGGGTTTAATTAGTATTTGTGTGAAATGTTTATATGGAAGAAGCTTATATTTTGTATTTGTGTGCTCTTGGTGACTCTGTTTTCTGTTTTGTATTGATTTTTGGAAAGACAGCAAAATGAATGGAAGTTAATTGTCACTTTTTCTTGTTTAAATTTTGAAAATCT
CDS Sequence
Protein Sequence