Gene Details:
- Gene ID: AT5G05850
- Gene Symbol: PIRL1
- Gene Name: plant intracellular ras group-related LRR 1
- Description: plant intracellular ras group-related LRR 1;(source:Araport11)
- TAIR Accession: locus:2166429
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Gene Ontology:
- GO:0009555 — acts upstream of or within — pollen development
- GO:0003674 — enables — molecular_function
- GO:0005886 — located in — plasma membrane
- GO:0055046 — acts upstream of or within — microgametogenesis
- GO:0009555 — involved in — pollen development
- GO:0007165 — involved in — signal transduction
- GO:0055046 — involved in — microgametogenesis
Function-related keywords:
Literature:
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- PIRLs: a novel class of plant intracellular leucine-rich repeat proteins. DOI: 10.1093/pcp/pci097 ; PMID: 15809230
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- The Arabidopsis Plant Intracellular Ras-group LRR (PIRL) Family and the Value of Reverse Genetic Analysis for Identifying Genes that Function in Gametophyte Development. DOI: 10.3390/plants2030507 ; PMID: 27137390
- Expression analysis of plant intracellular Ras-group related leucine-rich repeat proteins (PIRLs) in Arabidopsis thaliana. DOI: 10.1016/j.bbrep.2022.101241 ; PMID: 35280522
Sequences:
cDNA Sequence
- >AT5G05850.1
CTTGTATTAATACAAAACCACGTGTAATTTAACGATCTTTGACTTTGACTTGGCAATAGAGATGCTAATAGTACGGAAGGACATGAGACACGAACCAATAATCGCTTCTTCTTCTTCTTCTTCTTCCTCAATCTCCCAATCGTCTCTTCCATCAAGCTCCCAACAATGGCGACGGAGCTTAACCCTAAGAACTTCCCTGTTCTCTCTTATGTCTTGGATCGTCTCCCTTCATTCACCGCCAAATCCTCTTCCTCTTCCGATGTCGAGCCACCACCATCCAAATCCGATCCTTCTTCATCATCAAACCACTCTATCGAGATAGTGACTCAGATGCCTCACTTGGCTCATCCTGATGTTCTTGCCTCCATGACTAACGCAACCGCCGACGTTTCTCAGACCCGATCTGTTCTTCGAACCCTAGGACCAAGACCCGATCACGAAACCGTCGACAGAGCTCGTGCTAGGCTCCGTGAGATCGACGCGTCTTTGTCGGAATCTTTCGAAGAGATCGCTCTCTCTCCTAACGATATTGACGTGGCGGAGAAGGAACAGAAGAGGAGAGAAGCTGTGGAGCAAGAGAAGATTTGGTATAAATCGATCCTTAAGCTTAACGAGCTTCATGAATCTTATGAGAAGCTTTTGAAAGAAGCAGAGGAGAGGCTCGTGAGGATCTATGAGTCTGCCGAGAAGAATGCTGCCGCGGTGGCGGAGGAGGAAGCTGCGGAGGTTGAAGTCAATGAAGAGGTTGTGAGTATACTGCAACAAGCTGCGGAGAATCCATTGGACCGAGTTGATTTGTCTGGTCGGAAATTGAAGTTGCTTCCTGAAGCATTTGGAAAGATTCAAGGTCTCCTTGTTCTTAATCTCTATAACAATCAGCTTCAGGCTATTCCTGATTCGATAGCTGGTTTGCATAACCTTCTCGAACTCGATGTTTCCACTAATTTCCTGGAGACATTACCAGATTCGATCGGTTTATTGTCAAAGTTGAAGATTTTGAATGTCTCTTGTAACAAACTCACAACTTTACCAGATTCCATCTGCCATTGTGGATCGTTGGTTGTCTTGGATGCGAGCTACAACAATCTCACCTACTTACCAACAAACATCGGATTCGAGCTAGTGAAACTAGAGAAGCTCTTGATCCATCTCAACAAAATCAGATCATTACCAACTTCCATTGGTGAAATGAGATCCTTACGCTACCTCGATGCACACTTCAACGAACTCAATGGTCTCCCAAATTCTTTCGGGCTGCTCACGAACCTCGAGTACCTTAACCTGAGCAGTAACTTCAGCGATCTCCAAGATCTCCCTGCTTCATTCGGAGATCTCATAAGCCTCCAAGAACTCGACTTGAGCAACAACCAGATCCATTCTCTTCCAGACGCTTTTGGCACGCTCGTGAACTTGACCAAACTGAACTTGGACCAAAACCCGCTTGTTGTCCCGCCTGATGAAGTCGTGAAACAAGGTGTGGATGCGGTTAAAATGTATATGGGTAAGAGATGGGTCAGCATGTTGGAAGAGGAAGAGAAGATGGCGAATATGAAGGATGAGATGGATCAGACAAACACCGATTGGCTCACCCGAACCACCTCGAAGCTGAAAACGTATGTTACTGAGGTCTCGGAGTATCTTGGCTCGAATCCGCCTAGAGATCCTTACCTTGACCAGCAGCTATGAAATGACTTTGAGCTTCATTTTACATTTTCGTGACGATATCTCAAGTATCAGTTTCCAAAGTGATCTTCAGTCTTGAGTTTTCCTGCCGCTGCTTCTCTGTTTCGGTATATAGTTTTTTTTTCTCTTTTATTTGCTTCTACTCTTTACTGTTGTTTATTCGTATTTGTCTCATAACATTTCATTTATTTGTTTACCTTTTTTTTTCTTTTTTCTGAAAGAATTTTATGTTCCTTCAACAATTTTGAGAGATGGTAACAGAAGTTCTTTTTTCAAGTTTACGAATGTA
CDS Sequence
Protein Sequence