Information report for AT5G05780
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0043161 — involved in — proteasome-mediated ubiquitin-dependent protein catabolic process
- GO:0008237 — enables — metallopeptidase activity
- GO:0009965 — acts upstream of or within — leaf morphogenesis
- GO:0045087 — involved in — innate immune response
- GO:0006511 — acts upstream of or within — ubiquitin-dependent protein catabolic process
- GO:0005886 — located in — plasma membrane
- GO:0005838 — part of — proteasome regulatory particle
- GO:0000502 — part of — proteasome complex
Functional Keywords
Literature and News
- Structure and functional analysis of the 26S proteasome subunits from plants. DOI: 10.1023/a:1006926322501 ; PMID: 10363660
- Genomic evidence for COP1 as a repressor of light-regulated gene expression and development in Arabidopsis. DOI: 10.1105/tpc.004416 ; PMID: 12368493
- Purification of the Arabidopsis 26 S proteasome: biochemical and molecular analyses revealed the presence of multiple isoforms. DOI: 10.1074/jbc.M311977200 ; PMID: 14623884
- The proteolytic function of the Arabidopsis 26S proteasome is required for specifying leaf adaxial identity. DOI: 10.1105/tpc.106.045013 ; PMID: 17028202
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- Affinity purification of the Arabidopsis 26 S proteasome reveals a diverse array of plant proteolytic complexes. DOI: 10.1074/jbc.M110.136622 ; PMID: 20516081
- RPN1a, a 26S proteasome subunit, is required for innate immunity in Arabidopsis. DOI: 10.1111/j.1365-313X.2012.05048.x ; PMID: 22577987
- The TPLATE adaptor complex drives clathrin-mediated endocytosis in plants. DOI: 10.1016/j.cell.2014.01.039 ; PMID: 24529374
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Genetic Interactions Between BOB1 and Multiple 26S Proteasome Subunits Suggest a Role for Proteostasis in Regulating Arabidopsis Development. DOI: 10.1534/g3.118.300496 ; PMID: 29487187
- Structure, function and regulation of plant proteasomes. DOI: 10.1016/j.biochi.2007.07.019 ; PMID: 17825468
- Structure and functional analysis of the 26S proteasome subunits from plants. DOI: 10.1023/a:1006926322501 ; PMID: 10363660
Gene Resources
- UniProt: A0A654FYV3
- EMBL: CACRSJ010000110, CACSHJ010000096
- AlphaFoldDB: A0A654FYV3
- EnsemblPlants: AT5G05780.1
- Gramene: AT5G05780.1
- KEGG: ath:AT5G05780
- Orthologous matrix: HAMSIKT
- ExpressionAtlas: AT5G05780
- InterPro: IPR000555, IPR024969, IPR033858
- PANTHER: PTHR10540, PTHR10540:SF7
- PROSITE: PS50249
- Gene3D: 3.40.140.10
- OrthoDB: A0A654FYV3
- SWISS-MODEL: A0A654FYV3
- Conserved Domain Database: cd08062
Sequences
cDNA Sequence
- >AT5G05780.1
AGTGCAAAGTGGTTTTTCCTGGAGAAGAAGCAAACTCTCAAGCTCCGTCGGGAAAAAAAGGAAAACCAGATCGGAAAGTTCACGTTTTTCAAATCTTCTCCGGAGAAATCAGATTACTTGATTCTTCAAACAATGGATGTGATTAAGACGCAACAGATTTCAGCAAGGACGATCGAGAAAGTGGTTGTTCATCCACTAGTCTTGCTTAGTATCGTCGACCATTACAATCGCGTCGCTAAGGATTCAAGCAAGCGTGTCGTCGGTGTTCTTCTGGGGAGCAGCTCTCGTGGTGTTGTTGATGTCACCAACAGCTATGCAGTGCCCTTTGAGGAGGATGACAAAGACCCAAGCATCTGGTTTCTTGATCACAACTACCATGAGTCAATGTTCCACATGTTCAAGAGAATTAATGCCAAGGAGCATGTTGTAGGTTGGTACAGCACAGGCCCTAAACTTCGAGAGAATGATTTGGATGTTCACGCGTTGTTCAATGGCTATGTTCCAAATCCAGTCCTGGTCATTATTGATGTCCAGCCTAAAGAACTTGGAATCCCTACCAAAGCATACTATGCAGTGGAGGAGGTTAAGGAGAATGCTACTCAGAAAAGCCAGAAAGTTTTCGTTCATGTGTCTACAGAAATTGCTGCTCATGAAGTTGAGGAAATCGGCGTGGAGCATTTGCTCAGGGATGTGAAAGACACAACAATCAGTACCCTCGCGACTGAGGTCACTGCAAAACTTACTGCTTTGAAGGGGTTGGATGCACGTCTTCGGGAGATCCGGAGTTATCTTGACCTTGTAATCGAAGGAAAGCTCCCTCTAAACCATGAGATTTTATACCATCTACAGGACGTTTTCAACTTGCTTCCTAACCTGAATGTGAACGAGTTGGTCAAGGCCTTCTCCGTGAAAACAAATGACATGATGCTCGTTATCTATCTATCATCCCTCATTCGGAGTGTAATTGCGCTCCACAACTTGATCAACAACAAGTTACTGAACAAGGAACATGAAAAAGCAGAGGACTCAAAGCCTGTGGCCATACCTGCCACCAGCTAGATCAGGTTTTCTCGTGACTTACTGTAGTCATCATTGCCCGCGATGAAGGCAGCTATTGTGTGTTCTCTTCCCCAAAACAAAGGGTCAAGTCAGGGTGGGGGAACGAACGAGTTTAGTTTGATATCGACATTGTTGAATTCTCTCAGTTGTTCTGATTCAGAATGTATCAAAGAGTCTTTTTTCATTTTATCTTTCAAGTTCGTTAGGCTTAGGCCTCTTTTGAGGGGGTTTTGAATACAAAAGTTCACGTCAATGTGTCGAAATCTCCACAGAGATGGTCTTATCCTATTGAAATTAAGATTTTTTTTTTCACATTTCCCCCCCCCCCCCCCCCCCCCTTCTGTTATACTCTCACATCGTGACCGAGTATACAGCCCCGGTTGAATGTTGTTCGTTTTCCAAAGTCAACATGTTCTTCATGTTTGTCCTTAGTATGAAATTTCTGATTAGAGCCATTGACCACAACAAGGGTGTTACTTATGAATTTGTTTACTAGCAGAACTGAATAATTTGCATATTACCTAGATGTAAAAAGGAAGACTATACATTTTGATGAGCTTTTCT - >AT5G05780.2
AGTGCAAAGTGGTTTTTCCTGGAGAAGAAGCAAACTCTCAAGCTCCGTCGGGAAAAAAAGGAAAACCAGATCGGAAAGTTCACGTTTTTCAAATCTTCTCCGGAGAAATCAGATTACTTGATTCTTCAAACAATGGATGTGATTAAGACGCAACAGATTTCAGCAAGGACGATCGAGAAAGTGGTTGTTCATCCACTAGTCTTGCTTAGTATCGTCGACCATTACAATCGCGTCGCTAAGGATTCAAGCAAGCGTGTCGTCGGTGTTCTTCTGGGGAGCAGCTCTCGTGGTGTTGTTGATGTCACCAACAGCTATGCAGTGCCCTTTGAGGAGGATGACAAAGACCCAAGCATCTGGTTTCTTGATCACAACTACCATGAGTCAATGTTCCACATGTTCAAGAGAATTAATGCCAAGGAGCATGTTGTAGGTTGGTACAGCACAGGCCCTAAACTTCGAGAGAATGATTTGGATGTTCACGCGTTGTTCAATGGCTATGTTCCAAATCCAGTCCTGGTCATTATTGATGTCCAGCCTAAAGAACTTGGAATCCCTACCAAAGCATACTATGCAGTGGAGGAGGTTAAGGAGAATGCTACTCAGAAAAGCCAGAAAGTTTTCGTTCATGTGTCTACAGAAATTGCTGCTCATGAAGTTGAGGAAATCGGCGTGGAGCATTTGCTCAGGGATGTGAAAGACACAACAATCAGTACCCTCGCGACTGAGGTCACTGCAAAACTTACTGCTTTGAAGGGGTTGGATGCACGTCTTCGGGAGATCCGGAGTTATCTTGACCTTGTAATCGAAGGAAAGCTCCCTCTAAACCATGAGATTTTATACCATCTACAGGACGTTTTCAACTTGCTTCCTAACCTGAATGTGAACGAGTTGGTCAAGGCCTTCTCCGTGAAAACAAATGACATGATGCTCGTTATCTATCTATCATCCCTCATTCGGAGTGTAATTGCGCTCCACAACTTGATCAACAACAAGTTACTGAACAAGGAACATGAAAAAGCAGAGGACTCAAAGCCTGTGGCCATACCTGCCACCAGCTAGATCAGGTTTTCTCGTGACTTACTGTAGTCATCATTGCCCGCGATGAAGGCAGCTATTGTGTGTTCTCTTCCCCAAAACAAAGGGTCAAGTCAGGGTGGGGGAACGAACGAGTTTAGTTTGATATCGACATTGTTGAATTCTCTCAGTTGTTCTGATTCAGAATGTATCAAAGAGTCTTTTTTCATTTTATCTTTCAAGTTCGTTAGGCTTAGGCCTCTTTTGAGGGGGTTTTGAATACAAAAGTTCACGTCAATGTGTCGAAATCTCCACAGAGATGGTCTTATCCTATTGAAATTAAGATTTTTTTTTTCACATTTCCCCCCCCCCCCCCCCCCCCCTTCTGTTATACTCTCACATCGTGACCGAGTATACAGCCCCGGTTGAATGTTGTTCGTTTTCCAAAGTCAACATGTTCTTCATGTTTGTCCTTAGTATGAAATTTCTGATTAGAGCCATTGACCACAACAAGGGTGTTACTTATGAATTTGTTTACTAGCAGAACTGAATAATTTGCATATTACCTAGATGTAAAAAGGAAGACTATACATTTTGATGAGCTTTTCT
CDS Sequence
Protein Sequence