Information report for AT5G05610
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Arabidopsis ING and Alfin1-like protein families localize to the nucleus and bind to H3K4me3/2 via plant homeodomain fingers. DOI: 10.1111/j.1365-313X.2009.03795.x ; PMID: 19154204
- Enhanced Y1H assays for Arabidopsis. DOI: 10.1038/nmeth.1750 ; PMID: 22037706
- Promoter-based integration in plant defense regulation. DOI: 10.1104/pp.114.248716 ; PMID: 25352272
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell-Type Proliferation and Differentiation. DOI: 10.1105/tpc.15.00744 ; PMID: 27650334
- Family-Wide Characterization of Histone Binding Abilities of PHD Domains of AL Proteins in Arabidopsis thaliana. DOI: 10.1007/s10930-018-9796-4 ; PMID: 30259302
- Arabidopsis ING and Alfin1-like protein families localize to the nucleus and bind to H3K4me3/2 via plant homeodomain fingers. DOI: 10.1111/j.1365-313X.2009.03795.x ; PMID: 19154204
- Arabidopsis ING and Alfin1-like protein families localize to the nucleus and bind to H3K4me3/2 via plant homeodomain fingers. DOI: 10.1111/j.1365-313X.2009.03795.x ; PMID: 19154204
Gene Resources
- UniProt: A0A178UPZ2
- EMBL: CACRSJ010000110, CACSHJ010000096, LUHQ01000005
- AlphaFoldDB: A0A178UPZ2
- EnsemblPlants: AT5G05610.1, AT5G05610.2
- Gramene: AT5G05610.1, AT5G05610.2
- KEGG: ath:AT5G05610
- Orthologous matrix: KFYSLCD
- ExpressionAtlas: AT5G05610
- InterPro: IPR001965, IPR011011, IPR013083
- PANTHER: PTHR12321, PTHR12321:SF119
- SUPFAM: SSF57903
- PROSITE: PS01359, PS50016
- Gene3D: 3.30.40.10
- OrthoDB: A0A178UPZ2
- SWISS-MODEL: A0A178UPZ2
- Conserved Domain Database: cd15613
Sequences
cDNA Sequence
- >AT5G05610.1
CTTAAACTCTGGTCTCTCTCTATCTCTCTTGTCCGTGCGCATCGGATTTTGGAAACCATTGATGCAGACCTCAATCCATCTCTAACACCACTGATCTATCTACTTAGGTCTTCTCTAACAATACTTGTAATTTTCTTTCTTTTTGCTTCTTCCGTCACTACATCTATGGCCGCTGAGTCTTCTAACCCTCGCACCGTCGAAGAGATCTTCAAGGATTTTAGCGGTCGTCGCTCCGGTTTTCTTCGAGCTCTCTCCGTAGATGTTGACAAGTTCTACTCTTTATGCGATCCGGAAATGGAGAATCTGTGTTTGTACGGACACCCGAATGGGACATGGGAAGTGAATCTTCCAGCTGAGGAAGTGCCTCCGGAGCTACCTGAGCCAGCTCTTGGAATCAATTTCGCTAGAGATGGTATGCAGCGTAAAGATTGGCTCTCTTTAGTTGCTGTCCACAGTGATTGTTGGTTACTCTCTGTTTCTTCTTACTTCGGCGCTCGTCTTAATCGCAATGAGAGGAAACGTCTATTTAGTCTGATCAACGATCTCCCAACTCTCTTTGAAGTAGTGACGGGTAGGAAACCCATCAAAGACGGTAAACCAAGCATGGATCTCGGAAGCAAATCCAGAAACGGCGTAAAGAGATCAATTGAAGGGCAGACAAAGAGCACGCCGAAACTAATGGAAGAGAGCTATGAAGATGAAGACGATGAGCATGGAGACACACTCTGTGGAAGTTGTGGAGGAAACTACACAAACGACGAGTTCTGGATATGTTGTGATGTGTGTGAACGTTGGTACCATGGGAAGTGTGTGAAGATAACACCAGCCAAAGCAGAGAGCATCAAGCAATACAAATGCCCTTCTTGCTGCACTAAGAAAGGAAGACAGTGAGTGAATGAATGAGTGAGTCATCTTTCTCATTTTTCCTTATTTCTTTTTAAGTTATTGCAAAACATCCTTTTGTTAATGTATGAATACAAAACAATTATTGGTGTTAGATTCTCAAAAAGGGCGTTTTAAAATAGTAATGAGGGTATGAGACATGGAGAGAGTCATAGAGACACCAGCTGCTTAGAGAGCTTCGTCAACTTTTGATCAAATATGCCATGTGTTTGTATATGTAGCGACTCTACTACTTTCATCGTTTATGTGTGTAATCTCTCTTTAGGCTAATATAAAAAAAAATATTCTTATGTAAGGTTGATCTTCATAATCTCTCATATGGTATTTTAACTAAGAGTTTGTACTGACAAAATTTAAGTGGTTATAGTGGTGTTTTGTTATGTACACAAAACCAAAATAGTGGGGAAAAAACCTCATCTCCTGCAGTCTC - >AT5G05610.2
CTTAAACTCTGGTCTCTCTCTATCTCTCTTGTCCGTGCGCATCGGATTTTGGAAACCATTGATGCAGACCTCAATCCATCTCTAACACCACTGATCTATCTACTTAGGTCTTCTCTAACAATACTTGTAATTTTCTTTCTTTTTGCTTCTTCCGTCACTACATCTATGGCCGCTGAGTCTTCTAACCCTCGCACCGTCGAAGAGATCTTCAAGGATTTTAGCGGTCGTCGCTCCGGTTTTCTTCGAGCTCTCTCCGTAGATGTTGACAAGTTCTACTCTTTATGCGATCCGGAAATGGAGAATCTGTGTTTGTACGGACACCCGAATGGGACATGGGAAGTGAATCTTCCAGCTGAGGAAGTGCCTCCGGAGCTACCTGAGCCAGCTCTTGGAATCAATTTCGCTAGAGATGGTATGCAGCGTAAAGATTGGCTCTCTTTAGTTGCTGTCCACAGTGATTGTTGGTTACTCTCTGTTTCTTCTTACTTCGGCGCTCGTCTTAATCGCAATGAGAGGAAACGTCTATTTAGTCTGATCAACGATCTCCCAACTCTCTTTGAAGTAGTGACGGGTAGGAAACCCATCAAAGACGGTAAACCAAGCATGGATCTCGGAAGCAAATCCAGAAACGGCGTAAAGAGATCAATTGAAGGGCAGACAAAGAGCACGCCGAAACTAATGGAAGAGAGCTATGAAGATGAAGACGATGAGCATGGAGACACACTCTGTGGAAGTTGTGGAGGAAACTACACAAACGACGAGTTCTGGATATGTTGTGATGTGTGTGAACGTTGGTACCATGGGAAGTGTGTGAAGATAACACCAGCCAAAGCAGAGAGCATCAAGCAATACAAATGCCCTTCTTGCTGCACTAAGAAAGGAAGACAGTGAGTGAATGAATGAGTGAGTCATCTTTCTCATTTTTCCTTATTTCTTTTTAAGTTATTGCAAAACATCCTTTTGTTAATGTATGAATACAAAACAATTATTGGTGTTAGATTCTCAAAAAGGGCGTTTTAAAATAGTAATGAGGGTATGAGACATGGAGAGAGTCATAGAGACACCAGCTGCTTAGAGAGCTTCGTCAACTTTTGATCAAATATGCCATGTGTTTGTATATGTAGCGACTCTACTACTTTCATCGTTTATGTGTGTAATCTCTCTTTAGGCTAATATAAAAAAAAATATTCTTATGTAAGGTTGATCTTCATAATCTCTCATATGGTATTTTAACTAAGAGTTTGTACTGACAAAATTTAAGTGGTTATAGTGGTGTTTTGTTATGTACACAAAACCAAAATAGTGGGGAAAAAACCTCATCTCCTGCAGTCTC
CDS Sequence
Protein Sequence