Information report for AT5G05600
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Genes that are uniquely stress regulated in salt overly sensitive (sos) mutants. DOI: 10.1104/pp.126.1.363 ; PMID: 11351099
- Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism. DOI: 10.1023/a:1023005504702 ; PMID: 12777052
- The MKK2 pathway mediates cold and salt stress signaling in Arabidopsis. DOI: 10.1016/j.molcel.2004.06.023 ; PMID: 15225555
- Loss of TIP1;1 aquaporin in Arabidopsis leads to cell and plant death. DOI: 10.1111/j.1365-313X.2004.02265.x ; PMID: 15584951
- Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02399.x ; PMID: 15860015
- Highly syntenic regions in the genomes of soybean, Medicago truncatula, and Arabidopsis thaliana. DOI: 10.1186/1471-2229-5-15 ; PMID: 16102170
- Oviposition by pierid butterflies triggers defense responses in Arabidopsis. DOI: 10.1104/pp.106.090837 ; PMID: 17142483
- Arabidopsis thaliana plants acclimated to low dose rates of ultraviolet B radiation show specific changes in morphology and gene expression in the absence of stress symptoms. DOI: 10.1111/j.1469-8137.2007.02092.x ; PMID: 17587374
- Light has a specific role in modulating Arabidopsis gene expression at low temperature. DOI: 10.1186/1471-2229-8-13 ; PMID: 18230142
- Transcriptional profiling of pea ABR17 mediated changes in gene expression in Arabidopsis thaliana. DOI: 10.1186/1471-2229-8-91 ; PMID: 18783601
- Karrikins enhance light responses during germination and seedling development in Arabidopsis thaliana. DOI: 10.1073/pnas.0911635107 ; PMID: 20351290
- Arabidopsis JASMONATE-INDUCED OXYGENASES down-regulate plant immunity by hydroxylation and inactivation of the hormone jasmonic acid. DOI: 10.1073/pnas.1701101114 ; PMID: 28559313
- Jasmonic Acid Oxidase 2 Hydroxylates Jasmonic Acid and Represses Basal Defense and Resistance Responses against Botrytis cinerea Infection. DOI: 10.1016/j.molp.2017.07.010 ; PMID: 28760569
- FATTY ACID DESATURASE5 Is Required to Induce Autoimmune Responses in Gigantic Chloroplast Mutants of Arabidopsis. DOI: 10.1105/tpc.20.00016 ; PMID: 32796124
- Reshaping of the Arabidopsis thaliana Proteome Landscape and Co-regulation of Proteins in Development and Immunity. DOI: 10.1016/j.molp.2020.09.024 ; PMID: 33007468
- Broad-spectrum stress tolerance conferred by suppressing jasmonate signaling attenuation in Arabidopsis JASMONIC ACID OXIDASE mutants. DOI: 10.1111/tpj.15598 ; PMID: 34808024
- Characterization of flavonol synthase and leucoanthocyanidin dioxygenase genes in Arabidopsis. Further evidence for differential regulation of "early" and "late" genes. DOI: 10.1104/pp.113.4.1437 ; PMID: 9112784
- Genes that are uniquely stress regulated in salt overly sensitive (sos) mutants. DOI: 10.1104/pp.126.1.363 ; PMID: 11351099
- Regulation of anthocyanin biosynthesis in UV-A-irradiated cell cultures of carrot and in organs of intact carrot plants. DOI: 10.1016/s0168-9452(01)00408-3 ; PMID: 11448762
Gene Resources
- UniProt: A0A1P8BBY4
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BBY4
- EnsemblPlants: AT5G05600.2
- Gramene: AT5G05600.2
- ExpressionAtlas: AT5G05600
- InterPro: IPR005123, IPR026992, IPR027443
- PANTHER: PTHR47991
- SUPFAM: SSF51197
- PROSITE: PS51471
- Gene3D: 2.60.120.330
- OrthoDB: A0A1P8BBY4
- SWISS-MODEL: A0A1P8BBY4
Sequences
cDNA Sequence
- >AT5G05600.2
AAAGACGTTGCTTTCATCGTCTCTAGCCGATTTCTAGATTCTCCTCCACCACCATTTTACCCTTCTTTTAAATTCCTTCCTTCAATCAAAATTAGAATTATTTCTCAAACCTCTTCTTTATATACTAAAACGTCTCACATGAACAAGAAGAATAAATAGAAACAAAGAAGATGAACAAGAACAAGATTGATGTTAAGATCGAGACGAAGAAAGGATCGATGGATGAGTGGCCTGAGCCAATCGTCCGAGTCCAGTCCTTAGCCGAGAGCAACCTCTCCTCTCTCCCCGACCGTTACATCAAACCAGCGTCTCTACGCCCCACCACGACCGAAGACGCTCCTACCGCGACCAACATCCCAATCATAGACCTTGAAGGACTCTTCTCGGAAGAAGGGTTGTCTGATGACGTCATCATGGCTCGGATATCGGAGGCTTGCCGTGGGTGGGGGTTCTTCCAGGTGGTGAACCACGGGGTCAAACCGGAGCTGATGGACGCGGCTAGGGAGAATTGGAGAGAGTTTTTCCATATGCCGGTTAATGCCAAAGAGACTTACTCAAACTCACCAAGAACCTACGAAGGCTATGGAAGTAGACTAGGTGTTGAGAAAGGAGCAAGTCTTGATTGGAGTGATTATTACTTTCTCCATCTTCTTCCTCATCATTTGAAAGACTTCAACAAGTGGCCTTCTTTTCCTCCCACCATAAGAGAAGTGATCGATGAATACGGCGAAGAGCTAGTGAAGCTAAGTGGGAGAATTATGAGGGTATTATCGACAAACTTGGGACTAAAAGAGGATAAGTTTCAAGAAGCATTTGGAGGTGAAAACATTGGGGCGTGTTTGAGGGTTAATTATTACCCAAAATGCCCTCGACCGGAGCTGGCTCTTGGTCTCTCTCCACACTCCGATCCTGGCGGTATGACCATTCTCTTACCGGACGATCAAGTCTTCGGTCTCCAGGTTCGTAAAGATGACACGTGGATCACCGTCAAGCCTCATCCCCATGCTTTCATCGTCAATATTGGTGATCAAATACAGGTAGATTAACTTTTTATTAATATCCATGTTGCTAATATTCTATAAATATATTTTAACAACCTTAAAAATAATATGTAAACAAATTAACATAGTATTAGAAAGAAACGATAATTAAGAAACATATAAACAAAGTAAATATCACCTAAAGAATTACTAATTTACTACTTGTTGAGTTTTAATCTTAAAACTGTAATATTTTTTTTTAACAAAAAAAAAAGACTGTAATATTTTTTTCGAAAAACAATGTTTTAAAGAATATCTAAATTCCCTATTATCTTGTATCAGAGAAAATCGTCTATACAGAAAAGGACAAATGCGAAAGTTGTTATTTGACAACCAATGAATATGATATAAGCTATAGTTCCACGTTTTAGACACGTTTTAAAAATGCAAGTATGATAAACAGCTACCACTTGGTGCCAAAATGCCTTTATGATTTTTTCAACGAAAATAATGTAATTATTAAGTCATTATTCCGACAATAGAAATTACGTCCTTTTAGATCTATCCTGTCAAACCAAATTTTATGGACAACTTTCTTTAGAAGATAGTACAGCAATCGTAATTTGGAATTAATCGTTTTATTTATTAATCTGTGTCTGTCTCTATATTTGTAATACGAAACAAATAGTACATCAAATCCTTCACTGCGCACATGTGTGTGTTTGGCCGTTTGCCCATGTTGCATAGAAGGAATATTTATTTCTACAATGTATAACACGATTTTTAAAACAAACACCATATGTATATGCACATGAAATTTCTCAAAACATCATAAACTTAGATATTATTAATGTTTTTCTAAATTGTTGTACTTTTAGAAAATAAATATTGTGTTTTGTCTAAATTTTACCTTAGAATCACACAACTTACGTGTTGATAAGCTAATACATGTTGCGATGATGAAAAATGCAGATACTAAGCAACTCAACATACAAGAGTGTGGAGCATAGAGTGATAGTGAACTCGGACAAGGAGAGAGTTTCACTTGCCTTCTTCTACAATCCTAAAAGCGATATTCCGATCCAACCATTACAAGAACTTGTATCAACTCATAATCCTCCTTTATACCCTCCCATGACCTTTGATCAGTATAGACTCTTTATCAGAACTCAAGGTCCACAAGGCAAATCCCATGTTGAATCTCATATTTCTCCTCGTTGATTGTTTTTCTTTTATTTCTTCCCTTAAAGAAAAATTAATGTTTTGTTATTTTTATGATATTACGTCTGACTTGTATATGTGTACAATCATTTATATTTTGAATTTTCAAAGGATGATTTGCCTTCATGCATGCAAATAACAATATTGAATTGCATA - >AT5G05600.1
AAAGACGTTGCTTTCATCGTCTCTAGCCGATTTCTAGATTCTCCTCCACCACCATTTTACCCTTCTTTTAAATTCCTTCCTTCAATCAAAATTAGAATTATTTCTCAAACCTCTTCTTTATATACTAAAACGTCTCACATGAACAAGAAGAATAAATAGAAACAAAGAAGATGAACAAGAACAAGATTGATGTTAAGATCGAGACGAAGAAAGGATCGATGGATGAGTGGCCTGAGCCAATCGTCCGAGTCCAGTCCTTAGCCGAGAGCAACCTCTCCTCTCTCCCCGACCGTTACATCAAACCAGCGTCTCTACGCCCCACCACGACCGAAGACGCTCCTACCGCGACCAACATCCCAATCATAGACCTTGAAGGACTCTTCTCGGAAGAAGGGTTGTCTGATGACGTCATCATGGCTCGGATATCGGAGGCTTGCCGTGGGTGGGGGTTCTTCCAGGTGGTGAACCACGGGGTCAAACCGGAGCTGATGGACGCGGCTAGGGAGAATTGGAGAGAGTTTTTCCATATGCCGGTTAATGCCAAAGAGACTTACTCAAACTCACCAAGAACCTACGAAGGCTATGGAAGTAGACTAGGTGTTGAGAAAGGAGCAAGTCTTGATTGGAGTGATTATTACTTTCTCCATCTTCTTCCTCATCATTTGAAAGACTTCAACAAGTGGCCTTCTTTTCCTCCCACCATAAGAGAAGTGATCGATGAATACGGCGAAGAGCTAGTGAAGCTAAGTGGGAGAATTATGAGGGTATTATCGACAAACTTGGGACTAAAAGAGGATAAGTTTCAAGAAGCATTTGGAGGTGAAAACATTGGGGCGTGTTTGAGGGTTAATTATTACCCAAAATGCCCTCGACCGGAGCTGGCTCTTGGTCTCTCTCCACACTCCGATCCTGGCGGTATGACCATTCTCTTACCGGACGATCAAGTCTTCGGTCTCCAGGTTCGTAAAGATGACACGTGGATCACCGTCAAGCCTCATCCCCATGCTTTCATCGTCAATATTGGTGATCAAATACAGGTAGATTAACTTTTTATTAATATCCATGTTGCTAATATTCTATAAATATATTTTAACAACCTTAAAAATAATATGTAAACAAATTAACATAGTATTAGAAAGAAACGATAATTAAGAAACATATAAACAAAGTAAATATCACCTAAAGAATTACTAATTTACTACTTGTTGAGTTTTAATCTTAAAACTGTAATATTTTTTTTTAACAAAAAAAAAAGACTGTAATATTTTTTTCGAAAAACAATGTTTTAAAGAATATCTAAATTCCCTATTATCTTGTATCAGAGAAAATCGTCTATACAGAAAAGGACAAATGCGAAAGTTGTTATTTGACAACCAATGAATATGATATAAGCTATAGTTCCACGTTTTAGACACGTTTTAAAAATGCAAGTATGATAAACAGCTACCACTTGGTGCCAAAATGCCTTTATGATTTTTTCAACGAAAATAATGTAATTATTAAGTCATTATTCCGACAATAGAAATTACGTCCTTTTAGATCTATCCTGTCAAACCAAATTTTATGGACAACTTTCTTTAGAAGATAGTACAGCAATCGTAATTTGGAATTAATCGTTTTATTTATTAATCTGTGTCTGTCTCTATATTTGTAATACGAAACAAATAGTACATCAAATCCTTCACTGCGCACATGTGTGTGTTTGGCCGTTTGCCCATGTTGCATAGAAGGAATATTTATTTCTACAATGTATAACACGATTTTTAAAACAAACACCATATGTATATGCACATGAAATTTCTCAAAACATCATAAACTTAGATATTATTAATGTTTTTCTAAATTGTTGTACTTTTAGAAAATAAATATTGTGTTTTGTCTAAATTTTACCTTAGAATCACACAACTTACGTGTTGATAAGCTAATACATGTTGCGATGATGAAAAATGCAGATACTAAGCAACTCAACATACAAGAGTGTGGAGCATAGAGTGATAGTGAACTCGGACAAGGAGAGAGTTTCACTTGCCTTCTTCTACAATCCTAAAAGCGATATTCCGATCCAACCATTACAAGAACTTGTATCAACTCATAATCCTCCTTTATACCCTCCCATGACCTTTGATCAGTATAGACTCTTTATCAGAACTCAAGGTCCACAAGGCAAATCCCATGTTGAATCTCATATTTCTCCTCGTTGATTGTTTTTCTTTTATTTCTTCCCTTAAAGAAAAATTAATGTTTTGTTATTTTTATGATATTACGTCTGACTTGTATATGTGTACAATCATTTATATTTTGAATTTTCAAAGGATGATTTGCCTTCATGCATGCAAATAACAATATTGAATTGCATA
CDS Sequence
Protein Sequence