Information report for AT5G04885
Gene Details
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Functional Descriptions
- PO:0006339 — juvenile vascular leaf — hoja juvenil (Spanish, exact), 維管束系幼葉 (Japanese, exact)
- PO:0006340 — adult vascular leaf — hoja adulta (Spanish, exact), 維管束系の成葉 (Japanese, exact)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
Functional Keywords
- juvenile vascular leaf , adult vascular leaf , fruit , root , flower , stem
Literature and News
- Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis. DOI: 10.1104/pp.010884 ; PMID: 12068095
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
- Localization of organelle proteins by isotope tagging (LOPIT). DOI: 10.1074/mcp.T400009-MCP200 ; PMID: 15295017
- Analysis of detergent-resistant membranes in Arabidopsis. Evidence for plasma membrane lipid rafts. DOI: 10.1104/pp.104.053041 ; PMID: 15618420
- Expression of beta-galactosidase and beta-xylosidase genes during microspore and pollen development. DOI: 10.1007/s00425-004-1409-0 ; PMID: 15517348
- Apoplastic glycosidases active against xyloglucan oligosaccharides of Arabidopsis thaliana. DOI: 10.1093/pcp/pci223 ; PMID: 16267099
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Multiplex Fluorescent, Activity-Based Protein Profiling Identifies Active α-Glycosidases and Other Hydrolases in Plants. DOI: 10.1104/pp.18.00250 ; PMID: 29555787
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
- Apoplastic glycosidases active against xyloglucan oligosaccharides of Arabidopsis thaliana. DOI: 10.1093/pcp/pci223 ; PMID: 16267099
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A1P8B9U3
- EMBL: CP002688
- AlphaFoldDB: A0A1P8B9U3
- EnsemblPlants: AT5G04885.2
- Gramene: AT5G04885.2
- KEGG: ath:AT5G04885
- ExpressionAtlas: AT5G04885
- InterPro: IPR001764, IPR002772, IPR017853
- PANTHER: PTHR30620, PTHR30620:SF35
- SUPFAM: SSF51445, SSF52279
- Gene3D: 3.20.20.300, 3.40.50.1700
- SWISS-MODEL: A0A1P8B9U3
Sequences
cDNA Sequence
- >AT5G04885.2
TCTTCTTTCTTCCTCCATTCTCTACTGTTGAATCTTGCCTTTTTCCTTACCCCCAATGTATGCTTCTTCTTATTTCTTGTTTTCTTGGCTAGCTTGGTTCTTGGTTTCTTGTATGAGGCTAGTAGCTTTATAATGATTCGTTTGGAAAATAAGAAAATGAGAAAAGTTTCCCCTGTTACGAAGATGAGCAGAGATTCAGTAAGAATCGTTGGGGTTCTTCTATGGATGTGTATGTGGGTTTGTTGTTATGGGGATGGAGAGTATCTGTTGTACAAGGACCCGAAACAGACGGTGTCAGATCGAGTTGCGGATTTGTTTGGTAGAATGACTTTGGAAGAGAAGATTGGCCAGATGGTGCAGATTGATAGAAGTGTTGCCACTGTCAACATTATGAGAGATTACTTCATCGGCAGTGTATTGAGTGGTGGTGGGAGCGCTCCACTTCCTGAGGCAAGTGCTCAGAATTGGGTTGATATGATAAATGAGTACCAAAAGGGGGCTCTAGTTAGTCGTTTGGGAATTCCTATGATATATGGCATTGATGCCGTTCACGGGCATAACAATGTCTATAACGCTACTATTTTCCCTCACAATGTTGGTCTTGGAGCCACTAGGGATCCTGATCTTGTTAAGAGGATTGGAGCAGCAACTGCAGTCGAAGTCAGAGCCACTGGAATCCCATACACATTTGCTCCTTGCATTGCAGTTTGTAGAGATCCCAGATGGGGTAGATGTTATGAGAGCTACAGCGAGGATCACAAAGTCGTGGAAGACATGACGGATGTCATACTTGGTTTACAAGGAGAGCCTCCTTCCAACTATAAGCACGGAGTTCCATTCGTTGGTGGCAGGGATAAAGTTGCAGCCTGTGCCAAGCATTACGTGGGAGATGGTGGGACAACCCGCGGAGTAAACGAGAACAACACTGTGACTGATTTACACGGTCTTCTTAGCGTTCACATGCCCGCTTATGCTGATGCAGTTTACAAAGGTGTTTCCACAGTGATGGTTTCATATTCGAGCTGGAATGGTGAGAAGATGCATGCAAATACTGAGCTGATCACAGGGTATCTTAAGGGTACCCTTAAGTTTAAGGGTTTTGTTATCTCGGATTGGCAAGGTGTCGATAAGATTTCCACACCACCGCATACGCACTACACAGCTTCCGTCCGAGCTGCAATTCAAGCTGGAATTGATATGGTCATGGTCCCCTTCAACTTTACCGAGTTTGTCAATGATCTTACAACCTTGGTGAAGAATAATTCAATTCCTGTCACTCGGATTGATGATGCTGTCAGAAGAATCCTGCTTGTCAAGTTCACCATGGGTCTTTTTGAGAACCCTTTGGCTGATTACAGCTTTTCCAGTGAACTAGGAAGCCAGGCACATAGAGACTTGGCAAGGGAGGCTGTTAGAAAATCCCTTGTGCTACTGAAGAACGGGAACAAAACCAATCCTATGCTCCCACTTCCCAGGAAGACTTCAAAGATCCTAGTCGCTGGCACTCACGCTGATAATTTAGGTTATCAGTGTGGTGGTTGGACCATAACTTGGCAAGGATTTAGCGGTAATAAGAACACGAGAGGGACTACACTTCTTAGCGCTGTAAAATCAGCTGTTGATCAAAGCACTGAAGTTGTCTTCCGCGAGAACCCGGATGCTGAATTCATCAAATCGAACAACTTTGCTTATGCAATCATTGCTGTTGGTGAACCTCCATATGCAGAAACAGCTGGAGACAGCGACAAGCTAACTATGCTTGACCCCGGTCCAGCGATTATTAGCTCCACTTGTCAGGCTGTCAAGTGTGTGGTTGTGGTCATTTCAGGTAGACCACTTGTGATGGAACCTTACGTTGCCTCGATCGATGCATTGGTTGCAGCATGGCTACCAGGAACAGAAGGCCAAGGTATCACTGATGCTCTCTTTGGGGACCATGGCTTCAGTGGAAAACTTCCTGTTACATGGTTCAGAAACACAGAGCAGTTGCCTATGAGCTATGGAGATACACATTATGACCCGCTATTTGCTTACGGGTCTGGTCTTGAAACTGAGTCTGTTGCGAGCATTGTTGCTAGGTCAACCTCAGCTTCTGCTACTAACACAAAGCCCTGCTTATACACAGTCCTTGTTTCTGCTACATTGTGTCTGTTTATCTTCCCAAGCTTAAGCCGACTTTGAGAAGATGAAAAGTTACAAAAGCTTGGAGTAGATAGATTCTTTCGATTATCTGATCTGATCAAGTGAGTTCTTGTTAGCCTAGCAAAAGAGACCCTGAATCTGTGTCGTGTTATGTTCAGAGTTATTGCAACCTGAAACATTATTGGATATTCACACCAGAACGTTCTTCTATTTAGGTTCTTGAAAATTCTAATAGACAAATTCTCTTCTTGAAATCACCATTCTTGAAATTAAGTCACATAACTTCTCAG - >AT5G04885.1
TCTTCTTTCTTCCTCCATTCTCTACTGTTGAATCTTGCCTTTTTCCTTACCCCCAATGTATGCTTCTTCTTATTTCTTGTTTTCTTGGCTAGCTTGGTTCTTGGTTTCTTGTATGAGGCTAGTAGCTTTATAATGATTCGTTTGGAAAATAAGAAAATGAGAAAAGTTTCCCCTGTTACGAAGATGAGCAGAGATTCAGTAAGAATCGTTGGGGTTCTTCTATGGATGTGTATGTGGGTTTGTTGTTATGGGGATGGAGAGTATCTGTTGTACAAGGACCCGAAACAGACGGTGTCAGATCGAGTTGCGGATTTGTTTGGTAGAATGACTTTGGAAGAGAAGATTGGCCAGATGGTGCAGATTGATAGAAGTGTTGCCACTGTCAACATTATGAGAGATTACTTCATCGGCAGTGTATTGAGTGGTGGTGGGAGCGCTCCACTTCCTGAGGCAAGTGCTCAGAATTGGGTTGATATGATAAATGAGTACCAAAAGGGGGCTCTAGTTAGTCGTTTGGGAATTCCTATGATATATGGCATTGATGCCGTTCACGGGCATAACAATGTCTATAACGCTACTATTTTCCCTCACAATGTTGGTCTTGGAGCCACTAGGGATCCTGATCTTGTTAAGAGGATTGGAGCAGCAACTGCAGTCGAAGTCAGAGCCACTGGAATCCCATACACATTTGCTCCTTGCATTGCAGTTTGTAGAGATCCCAGATGGGGTAGATGTTATGAGAGCTACAGCGAGGATCACAAAGTCGTGGAAGACATGACGGATGTCATACTTGGTTTACAAGGAGAGCCTCCTTCCAACTATAAGCACGGAGTTCCATTCGTTGGTGGCAGGGATAAAGTTGCAGCCTGTGCCAAGCATTACGTGGGAGATGGTGGGACAACCCGCGGAGTAAACGAGAACAACACTGTGACTGATTTACACGGTCTTCTTAGCGTTCACATGCCCGCTTATGCTGATGCAGTTTACAAAGGTGTTTCCACAGTGATGGTTTCATATTCGAGCTGGAATGGTGAGAAGATGCATGCAAATACTGAGCTGATCACAGGGTATCTTAAGGGTACCCTTAAGTTTAAGGGTTTTGTTATCTCGGATTGGCAAGGTGTCGATAAGATTTCCACACCACCGCATACGCACTACACAGCTTCCGTCCGAGCTGCAATTCAAGCTGGAATTGATATGGTCATGGTCCCCTTCAACTTTACCGAGTTTGTCAATGATCTTACAACCTTGGTGAAGAATAATTCAATTCCTGTCACTCGGATTGATGATGCTGTCAGAAGAATCCTGCTTGTCAAGTTCACCATGGGTCTTTTTGAGAACCCTTTGGCTGATTACAGCTTTTCCAGTGAACTAGGAAGCCAGGCACATAGAGACTTGGCAAGGGAGGCTGTTAGAAAATCCCTTGTGCTACTGAAGAACGGGAACAAAACCAATCCTATGCTCCCACTTCCCAGGAAGACTTCAAAGATCCTAGTCGCTGGCACTCACGCTGATAATTTAGGTTATCAGTGTGGTGGTTGGACCATAACTTGGCAAGGATTTAGCGGTAATAAGAACACGAGAGGGACTACACTTCTTAGCGCTGTAAAATCAGCTGTTGATCAAAGCACTGAAGTTGTCTTCCGCGAGAACCCGGATGCTGAATTCATCAAATCGAACAACTTTGCTTATGCAATCATTGCTGTTGGTGAACCTCCATATGCAGAAACAGCTGGAGACAGCGACAAGCTAACTATGCTTGACCCCGGTCCAGCGATTATTAGCTCCACTTGTCAGGCTGTCAAGTGTGTGGTTGTGGTCATTTCAGGTAGACCACTTGTGATGGAACCTTACGTTGCCTCGATCGATGCATTGGTTGCAGCATGGCTACCAGGAACAGAAGGCCAAGGTATCACTGATGCTCTCTTTGGGGACCATGGCTTCAGTGGAAAACTTCCTGTTACATGGTTCAGAAACACAGAGCAGTTGCCTATGAGCTATGGAGATACACATTATGACCCGCTATTTGCTTACGGGTCTGGTCTTGAAACTGAGTCTGTTGCGAGCATTGTTGCTAGGTCAACCTCAGCTTCTGCTACTAACACAAAGCCCTGCTTATACACAGTCCTTGTTTCTGCTACATTGTGTCTGTTTATCTTCCCAAGCTTAAGCCGACTTTGAGAAGATGAAAAGTTACAAAAGCTTGGAGTAGATAGATTCTTTCGATTATCTGATCTGATCAAGTGAGTTCTTGTTAGCCTAGCAAAAGAGACCCTGAATCTGTGTCGTGTTATGTTCAGAGTTATTGCAACCTGAAACATTATTGGATATTCACACCAGAACGTTCTTCTATTTAGGTTCTTGAAAATTCTAATAGACAAATTCTCTTCTTGAAATCACCATTCTTGAAATTAAGTCACATAACTTCTCAG - >AT5G04885.3
TCTTCTTTCTTCCTCCATTCTCTACTGTTGAATCTTGCCTTTTTCCTTACCCCCAATGTATGCTTCTTCTTATTTCTTGTTTTCTTGGCTAGCTTGGTTCTTGGTTTCTTGTATGAGGCTAGTAGCTTTATAATGATTCGTTTGGAAAATAAGAAAATGAGAAAAGTTTCCCCTGTTACGAAGATGAGCAGAGATTCAGTAAGAATCGTTGGGGTTCTTCTATGGATGTGTATGTGGGTTTGTTGTTATGGGGATGGAGAGTATCTGTTGTACAAGGACCCGAAACAGACGGTGTCAGATCGAGTTGCGGATTTGTTTGGTAGAATGACTTTGGAAGAGAAGATTGGCCAGATGGTGCAGATTGATAGAAGTGTTGCCACTGTCAACATTATGAGAGATTACTTCATCGGCAGTGTATTGAGTGGTGGTGGGAGCGCTCCACTTCCTGAGGCAAGTGCTCAGAATTGGGTTGATATGATAAATGAGTACCAAAAGGGGGCTCTAGTTAGTCGTTTGGGAATTCCTATGATATATGGCATTGATGCCGTTCACGGGCATAACAATGTCTATAACGCTACTATTTTCCCTCACAATGTTGGTCTTGGAGCCACTAGGGATCCTGATCTTGTTAAGAGGATTGGAGCAGCAACTGCAGTCGAAGTCAGAGCCACTGGAATCCCATACACATTTGCTCCTTGCATTGCAGTTTGTAGAGATCCCAGATGGGGTAGATGTTATGAGAGCTACAGCGAGGATCACAAAGTCGTGGAAGACATGACGGATGTCATACTTGGTTTACAAGGAGAGCCTCCTTCCAACTATAAGCACGGAGTTCCATTCGTTGGTGGCAGGGATAAAGTTGCAGCCTGTGCCAAGCATTACGTGGGAGATGGTGGGACAACCCGCGGAGTAAACGAGAACAACACTGTGACTGATTTACACGGTCTTCTTAGCGTTCACATGCCCGCTTATGCTGATGCAGTTTACAAAGGTGTTTCCACAGTGATGGTTTCATATTCGAGCTGGAATGGTGAGAAGATGCATGCAAATACTGAGCTGATCACAGGGTATCTTAAGGGTACCCTTAAGTTTAAGGGTTTTGTTATCTCGGATTGGCAAGGTGTCGATAAGATTTCCACACCACCGCATACGCACTACACAGCTTCCGTCCGAGCTGCAATTCAAGCTGGAATTGATATGGTCATGGTCCCCTTCAACTTTACCGAGTTTGTCAATGATCTTACAACCTTGGTGAAGAATAATTCAATTCCTGTCACTCGGATTGATGATGCTGTCAGAAGAATCCTGCTTGTCAAGTTCACCATGGGTCTTTTTGAGAACCCTTTGGCTGATTACAGCTTTTCCAGTGAACTAGGAAGCCAGGCACATAGAGACTTGGCAAGGGAGGCTGTTAGAAAATCCCTTGTGCTACTGAAGAACGGGAACAAAACCAATCCTATGCTCCCACTTCCCAGGAAGACTTCAAAGATCCTAGTCGCTGGCACTCACGCTGATAATTTAGGTTATCAGTGTGGTGGTTGGACCATAACTTGGCAAGGATTTAGCGGTAATAAGAACACGAGAGGGACTACACTTCTTAGCGCTGTAAAATCAGCTGTTGATCAAAGCACTGAAGTTGTCTTCCGCGAGAACCCGGATGCTGAATTCATCAAATCGAACAACTTTGCTTATGCAATCATTGCTGTTGGTGAACCTCCATATGCAGAAACAGCTGGAGACAGCGACAAGCTAACTATGCTTGACCCCGGTCCAGCGATTATTAGCTCCACTTGTCAGGCTGTCAAGTGTGTGGTTGTGGTCATTTCAGGTAGACCACTTGTGATGGAACCTTACGTTGCCTCGATCGATGCATTGGTTGCAGCATGGCTACCAGGAACAGAAGGCCAAGGTATCACTGATGCTCTCTTTGGGGACCATGGCTTCAGTGGAAAACTTCCTGTTACATGGTTCAGAAACACAGAGCAGTTGCCTATGAGCTATGGAGATACACATTATGACCCGCTATTTGCTTACGGGTCTGGTCTTGAAACTGAGTCTGTTGCGAGCATTGTTGCTAGGTCAACCTCAGCTTCTGCTACTAACACAAAGCCCTGCTTATACACAGTCCTTGTTTCTGCTACATTGTGTCTGTTTATCTTCCCAAGCTTAAGCCGACTTTGAGAAGATGAAAAGTTACAAAAGCTTGGAGTAGATAGATTCTTTCGATTATCTGATCTGATCAAGTGAGTTCTTGTTAGCCTAGCAAAAGAGACCCTGAATCTGTGTCGTGTTATGTTCAGAGTTATTGCAACCTGAAACATTATTGGATATTCACACCAGAACGTTCTTCTATTTAGGTTCTTGAAAATTCTAATAGACAAATTCTCTTCTTGAAATCACCATTCTTGAAATTAAGTCACATAACTTCTCAG
CDS Sequence
Protein Sequence