Information report for AT5G04810
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- When defense pathways collide. The response of Arabidopsis to a combination of drought and heat stress. DOI: 10.1104/pp.103.033431 ; PMID: 15047901
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Analysis of essential Arabidopsis nuclear genes encoding plastid-targeted proteins. DOI: 10.1371/journal.pone.0073291 ; PMID: 24023856
- Trans-splicing of plastid rps12 transcripts, mediated by AtPPR4, is essential for embryo patterning in Arabidopsis thaliana. DOI: 10.1007/s00425-018-2896-8 ; PMID: 29687222
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- The coordinated action of PPR4 and EMB2654 on each intron half mediates trans-splicing of rps12 transcripts in plant chloroplasts. DOI: 10.1111/tpj.14509 ; PMID: 31442349
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- The RNA-recognition motif in chloroplasts. DOI: 10.1016/j.jplph.2011.01.012 ; PMID: 21330002
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Trans-splicing of plastid rps12 transcripts, mediated by AtPPR4, is essential for embryo patterning in Arabidopsis thaliana. DOI: 10.1007/s00425-018-2896-8 ; PMID: 29687222
Gene Resources
- UniProt: A0A1P8BFG1
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BFG1
- EnsemblPlants: AT5G04810.2
- Gramene: AT5G04810.2
- Orthologous matrix: CIPTVET
- ExpressionAtlas: AT5G04810
- InterPro: IPR000504, IPR002885, IPR011990
- PANTHER: PTHR47939, PTHR47939:SF1
- SUPFAM: SSF54928, SSF81901
- PROSITE: PS50102, PS51375
- Gene3D: 1.25.40.10, 3.30.70.330
- OrthoDB: A0A1P8BFG1
- SWISS-MODEL: A0A1P8BFG1
- Conserved Domain Database: cd00590
Sequences
cDNA Sequence
- >AT5G04810.2
GAGAAGGGAAAGATAGAGAATGGATAATGGAGGGAGCGTGTTGTCGCTCTCTGCTCCACACTTCCCTTACTCCGCCACCATTCTCCGACGTCACTCTCCGGTGGCTTCCATATCTTTCTCCCTTAAGCAACCACCACCGCAACCACCAGAACCTCCTGAGAGTCCTCCTGACCTCCGCCGCCCGGAGAAATCTATTGGTTCTTCTTCATCTTCTTCCTCTCCTTCCCCTATCCCTTCTCCTAAAACCCCTCTTAAGATTAATCCACTCAAGGGTTTAACCAATCGCTCTTCTGTGTCTCCTCTTGTTCAATCAGAGGTTTCGAGTAAAGTTTCTTCCTTTGGCTCCTCTCTAGCATCCAAGCTACGTTTGTCCAGCAAGCTCTCTCCTCCTCCTCCTCCTCCACCTCCGCCTCCTGTTGAGGAAACCACCCAATTCCGAGATGAGTTTCGGAGTGACACGAAACCACCGGAAGAAGAAACTCGAAACCCGCAACAGGAATTCCGACAAGAAGGGAAGATATTCGTTGGTAATTTACCGACATGGATAAAGAAACCAGAGTTTGAAGAGTTCTTCCGACAGTTCGGACCGATAGAGAATGTGATTCTAATCAAAGGACATCACGAGGTCGAGAAAAACGCGGGATTTGGGTTCATTATTTACGCGGCAGAGAAGTCTGCAATGAAAGCTGTGGAGTTCGACGGCGTTGAGTTTCACGGCAGGATATTGACGGTGAAGCTAGACGACGGAAAGAGGCTGAAAACAAAGGCTGAACAGAGAGTGAGGTGGGTAGAGGAAGGAGAAGAAGACACGAAAATGTCTAATAAGTCGTCGTGGCATCAAGAGAGAGAAGGGTCTCGAAAGTCACTACAGAGGATTTTAGATACCAATGGAGATAACTGGCAAGCTGTTATTTCAGCTTTCGAGAAGATCAGCAAGCCTTCGAGGACAGAGTTTGGTTTGATGGTGAAGTTCTATGGAAGAAGAGGGGATATGCATCGTGCACGTGAGACTTTTGAGAGAATGCGCGCGAGGGGTATCACACCAACATCACGTATATACACAAGCCTTATTCACGCTTATGCAGTTGGTAGAGACATGGACGAAGCACTGTCTTGTGTTCGTAAAATGAAGGAAGAAGGAATTGAGATGAGTTTGGTGACTTATAGTGTAATCGTTGGAGGATTCTCTAAAGCGGGACATGCCGAAGCTGCAGATTACTGGTTTGACGAGGCCAAACGGATACACAAAACCCTTAATGCCAGTATATATGGAAAAATCATATATGCACACTGTCAGACGTGCAATATGGAGCGGGCAGAGGCATTGGTGAGGGAGATGGAAGAAGAAGGTATTGATGCTCCTATTGCTATCTACCACACCATGATGGATGGTTATACAATGGTCGCTGATGAGAAGAAAGGCTTAGTTGTTTTCAAAAGACTTAAGGAATGTGGATTTACTCCAACAGTTGTTACTTATGGGTGCCTCATTAATCTTTATACTAAGGTTGGAAAGATTTCAAAAGCCTTGGAAGTTAGTAGAGTGATGAAGGAAGAGGGCGTAAAGCATAATTTAAAGACTTATTCGATGATGATTAACGGATTTGTAAAACTAAAAGATTGGGCCAATGCGTTTGCTGTATTTGAAGATATGGTAAAAGAAGGCATGAAACCAGATGTTATACTATACAACAACATCATCTCAGCATTCTGCGGGATGGGTAACATGGATCGAGCGATCCAGACTGTTAAGGAGATGCAAAAGCTGAGGCATAGACCAACCACACGGACATTTATGCCTATCATACATGGATATGCGAAATCCGGAGACATGAGGAGATCACTAGAAGTTTTTGATATGATGAGACGATGTGGGTGTGTTCCAACCGTTCATACTTTCAATGGTTTGATTAATGGTTTAGTTGAGAAACGTCAGATGGAAAAGGCGGTTGAGATATTAGACGAGATGACATTGGCGGGTGTAAGTGCAAACGAACATACTTACACAAAGATCATGCAAGGCTATGCATCAGTCGGTGATACCGGAAAAGCCTTTGAGTATTTTACAAGGCTTCAAAACGAAGGTTTGGATGTTGACATTTTCACTTACGAGGCGTTACTTAAAGCTTGCTGCAAATCAGGAAGAATGCAGAGCGCATTAGCTGTCACGAAAGAAATGAGTGCACGGAATATCCCGCGCAATTCCTTCGTCTATAACATATTAATCGACGGATGGGCACGAAGAGGCGATGTATGGGAAGCCGCGGATTTGATACAGCAGATGAAAAAAGAAGGTGTTAAACCCGACATTCATACTTACACATCCTTCATTAGCGCTTGTTCTAAGGCCGGCGACATGAATGTAAGTTTCCATTCAAGAAGCAGATTCTTGTCACGGGTTTGTAACGAGAAATAAAACTTTTGGAAATGTTTGGCAGAGAGCTACACAAACAATCGAAGAAATGGAAGCACTAGGTGTGAAACCTAACATCAAGACATACACGACCTTAATAAAAGGATGGGCGAGAGCATCTCTTCCAGAGAAAGCCTTAAGTTGCTACGAGGAAATGAAGGCGATGGGGATAAAACCCGACAAAGCTGTGTATCATTGCCTTCTGACTTCGCTTCTGTCGCGTGCTTCAATCGCAGAAGCTTACATTTACTCAGGAGTGATGACTATCTGCAAGGAAATGGTGGAGGCAGGCTTGATTGTTGATATGGGAACTGCGGTTCACTGGTCTAAATGTCTGTGTAAGATTGAAGCTTCAGGTGGTGAGCTCACTGAGACGTTGCAGAAGACTTTCCCACCTGATTGGAGCTCGCATCATCATCACCATGGCTTCTTAGATCAAGTTTCTGATGTTGACTCCGATGAAGATGATGTTGATGGTGAAGATGGTGAGGACGATGAAGATGTTAACTCTGTTTCGGATTTATTATCACCTTACAAGTAAGAAAAAACTGATATTGTAACAACTTAAGGAAAGAGCAATATCAGCATATTTTTGTAATTTTGTTTTCTTGTGTTTTACGTTTTTGCAAAATAAACCTTATTGAACGTACGATTTCTTCATAAAAGCGAAAATAATAAAAAGGAACCTAATAATAAAAGACATTAGAAAAT - >AT5G04810.1
GAGAAGGGAAAGATAGAGAATGGATAATGGAGGGAGCGTGTTGTCGCTCTCTGCTCCACACTTCCCTTACTCCGCCACCATTCTCCGACGTCACTCTCCGGTGGCTTCCATATCTTTCTCCCTTAAGCAACCACCACCGCAACCACCAGAACCTCCTGAGAGTCCTCCTGACCTCCGCCGCCCGGAGAAATCTATTGGTTCTTCTTCATCTTCTTCCTCTCCTTCCCCTATCCCTTCTCCTAAAACCCCTCTTAAGATTAATCCACTCAAGGGTTTAACCAATCGCTCTTCTGTGTCTCCTCTTGTTCAATCAGAGGTTTCGAGTAAAGTTTCTTCCTTTGGCTCCTCTCTAGCATCCAAGCTACGTTTGTCCAGCAAGCTCTCTCCTCCTCCTCCTCCTCCACCTCCGCCTCCTGTTGAGGAAACCACCCAATTCCGAGATGAGTTTCGGAGTGACACGAAACCACCGGAAGAAGAAACTCGAAACCCGCAACAGGAATTCCGACAAGAAGGGAAGATATTCGTTGGTAATTTACCGACATGGATAAAGAAACCAGAGTTTGAAGAGTTCTTCCGACAGTTCGGACCGATAGAGAATGTGATTCTAATCAAAGGACATCACGAGGTCGAGAAAAACGCGGGATTTGGGTTCATTATTTACGCGGCAGAGAAGTCTGCAATGAAAGCTGTGGAGTTCGACGGCGTTGAGTTTCACGGCAGGATATTGACGGTGAAGCTAGACGACGGAAAGAGGCTGAAAACAAAGGCTGAACAGAGAGTGAGGTGGGTAGAGGAAGGAGAAGAAGACACGAAAATGTCTAATAAGTCGTCGTGGCATCAAGAGAGAGAAGGGTCTCGAAAGTCACTACAGAGGATTTTAGATACCAATGGAGATAACTGGCAAGCTGTTATTTCAGCTTTCGAGAAGATCAGCAAGCCTTCGAGGACAGAGTTTGGTTTGATGGTGAAGTTCTATGGAAGAAGAGGGGATATGCATCGTGCACGTGAGACTTTTGAGAGAATGCGCGCGAGGGGTATCACACCAACATCACGTATATACACAAGCCTTATTCACGCTTATGCAGTTGGTAGAGACATGGACGAAGCACTGTCTTGTGTTCGTAAAATGAAGGAAGAAGGAATTGAGATGAGTTTGGTGACTTATAGTGTAATCGTTGGAGGATTCTCTAAAGCGGGACATGCCGAAGCTGCAGATTACTGGTTTGACGAGGCCAAACGGATACACAAAACCCTTAATGCCAGTATATATGGAAAAATCATATATGCACACTGTCAGACGTGCAATATGGAGCGGGCAGAGGCATTGGTGAGGGAGATGGAAGAAGAAGGTATTGATGCTCCTATTGCTATCTACCACACCATGATGGATGGTTATACAATGGTCGCTGATGAGAAGAAAGGCTTAGTTGTTTTCAAAAGACTTAAGGAATGTGGATTTACTCCAACAGTTGTTACTTATGGGTGCCTCATTAATCTTTATACTAAGGTTGGAAAGATTTCAAAAGCCTTGGAAGTTAGTAGAGTGATGAAGGAAGAGGGCGTAAAGCATAATTTAAAGACTTATTCGATGATGATTAACGGATTTGTAAAACTAAAAGATTGGGCCAATGCGTTTGCTGTATTTGAAGATATGGTAAAAGAAGGCATGAAACCAGATGTTATACTATACAACAACATCATCTCAGCATTCTGCGGGATGGGTAACATGGATCGAGCGATCCAGACTGTTAAGGAGATGCAAAAGCTGAGGCATAGACCAACCACACGGACATTTATGCCTATCATACATGGATATGCGAAATCCGGAGACATGAGGAGATCACTAGAAGTTTTTGATATGATGAGACGATGTGGGTGTGTTCCAACCGTTCATACTTTCAATGGTTTGATTAATGGTTTAGTTGAGAAACGTCAGATGGAAAAGGCGGTTGAGATATTAGACGAGATGACATTGGCGGGTGTAAGTGCAAACGAACATACTTACACAAAGATCATGCAAGGCTATGCATCAGTCGGTGATACCGGAAAAGCCTTTGAGTATTTTACAAGGCTTCAAAACGAAGGTTTGGATGTTGACATTTTCACTTACGAGGCGTTACTTAAAGCTTGCTGCAAATCAGGAAGAATGCAGAGCGCATTAGCTGTCACGAAAGAAATGAGTGCACGGAATATCCCGCGCAATTCCTTCGTCTATAACATATTAATCGACGGATGGGCACGAAGAGGCGATGTATGGGAAGCCGCGGATTTGATACAGCAGATGAAAAAAGAAGGTGTTAAACCCGACATTCATACTTACACATCCTTCATTAGCGCTTGTTCTAAGGCCGGCGACATGAATGTAAGTTTCCATTCAAGAAGCAGATTCTTGTCACGGGTTTGTAACGAGAAATAAAACTTTTGGAAATGTTTGGCAGAGAGCTACACAAACAATCGAAGAAATGGAAGCACTAGGTGTGAAACCTAACATCAAGACATACACGACCTTAATAAAAGGATGGGCGAGAGCATCTCTTCCAGAGAAAGCCTTAAGTTGCTACGAGGAAATGAAGGCGATGGGGATAAAACCCGACAAAGCTGTGTATCATTGCCTTCTGACTTCGCTTCTGTCGCGTGCTTCAATCGCAGAAGCTTACATTTACTCAGGAGTGATGACTATCTGCAAGGAAATGGTGGAGGCAGGCTTGATTGTTGATATGGGAACTGCGGTTCACTGGTCTAAATGTCTGTGTAAGATTGAAGCTTCAGGTGGTGAGCTCACTGAGACGTTGCAGAAGACTTTCCCACCTGATTGGAGCTCGCATCATCATCACCATGGCTTCTTAGATCAAGTTTCTGATGTTGACTCCGATGAAGATGATGTTGATGGTGAAGATGGTGAGGACGATGAAGATGTTAACTCTGTTTCGGATTTATTATCACCTTACAAGTAAGAAAAAACTGATATTGTAACAACTTAAGGAAAGAGCAATATCAGCATATTTTTGTAATTTTGTTTTCTTGTGTTTTACGTTTTTGCAAAATAAACCTTATTGAACGTACGATTTCTTCATAAAAGCGAAAATAATAAAAAGGAACCTAATAATAAAAGACATTAGAAAAT
CDS Sequence
Protein Sequence