Information report for AT5G04590
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- PO:0000003 — whole plant — planta entera (Spanish, exact), 植物体全体 (Japanese, exact), clonal colony (related), colony (related), bush (narrow), frutex (narrow), frutices (narrow), gametophyte (narrow), herb (narrow), liana (narrow), prothalli (narrow), prothallium (narrow), prothallus (narrow), seedling (narrow), shrub (narrow), sporophyte (narrow), suffrutex (narrow), suffrutices (narrow), tree (narrow), vine (narrow), woody clump (narrow), genet (broad), ramet (broad)
Functional Keywords
Literature and News
- Proteomic analysis and extensive protein identification from dry, germinating Arabidopsis seeds and young seedlings. DOI: 10.5483/bmbrep.2005.38.6.650 ; PMID: 16336779
- The chloroplast lumen and stromal proteomes of Arabidopsis thaliana show and long-term exposure to low temperature. DOI: 10.1111/j.1365-313X.2006.02821.x ; PMID: 16923014
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Divalent metal ions in plant mitochondria and their role in interactions with proteins and oxidative stress-induced damage to respiratory function. DOI: 10.1104/pp.109.147942 ; PMID: 20018591
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- The role of compartment-specific cysteine synthesis for sulfur homeostasis during H2S exposure in Arabidopsis. DOI: 10.1093/pcp/pcu166 ; PMID: 25416292
- Alleviation of Nitrogen and Sulfur Deficiency and Enhancement of Photosynthesis in Arabidopsis thaliana by Overexpression of Uroporphyrinogen III Methyltransferase (UPM1). DOI: 10.3389/fpls.2017.02265 ; PMID: 29472934
- FdC1 and Leaf-Type Ferredoxins Channel Electrons From Photosystem I to Different Downstream Electron Acceptors. DOI: 10.3389/fpls.2018.00410 ; PMID: 29670639
- Sulfur Partitioning between Glutathione and Protein Synthesis Determines Plant Growth. DOI: 10.1104/pp.18.00421 ; PMID: 29752309
- Distribution of control in the sulfur assimilation in Arabidopsis thaliana depends on environmental conditions. DOI: 10.1111/nph.15704 ; PMID: 30681147
- Potential Arabidopsis thaliana glucosinolate genes identified from the co-expression modules using graph clustering approach. DOI: 10.7717/peerj.11876 ; PMID: 34430080
- Active O-acetylserine-(thiol) lyase A and B confer improved selenium resistance and degrade l-Cys and l-SeCys in Arabidopsis. DOI: 10.1093/jxb/erac021 ; PMID: 35084469
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- The chloroplast lumen and stromal proteomes of Arabidopsis thaliana show and long-term exposure to low temperature. DOI: 10.1111/j.1365-313X.2006.02821.x ; PMID: 16923014
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Comparative proteomic analysis of NaCl stress-responsive proteins in Arabidopsis roots. DOI: 10.1093/jxb/erm207 ; PMID: 17916636
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. DOI: 10.1016/j.phytochem.2008.04.007 ; PMID: 18538804
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178UPZ1
- EMBL: CACSHJ010000096, LR881470, LUHQ01000005
- AlphaFoldDB: A0A178UPZ1
- EnsemblPlants: AT5G04590.1
- Gramene: AT5G04590.1
- KEGG: ath:AT5G04590
- Orthologous matrix: WQMMLRL
- ExpressionAtlas: AT5G04590
- InterPro: IPR005117, IPR006066, IPR006067
- PANTHER: PTHR11493, PTHR11493:SF47
- SUPFAM: SSF55124, SSF56014
- PROSITE: PS00365
- Gene3D: 3.30.413.10
- OrthoDB: A0A178UPZ1
- SWISS-MODEL: A0A178UPZ1
Sequences
cDNA Sequence
- >AT5G04590.1
CGGTTCAAGTTTTTATCAAGAGTAAAAGTTCCATTTTCATTTCTCATAATCAGATTCGTATTCACGCGCCTATTATCTCGAACTTATCCAACACGCGCGTTTAATCAACCGTTGGATTCTCAATGGACGGTGGATTAAATTAGCTGAAAAGTAAAGCGGTGCGTTTTACGCGCTTCTTCTGGCTAGCCGCCGCACGTGTCATGCACGTGATAGCGCACGTTAGCTTTGACCATTGTCTTTTGTTCTCTATTAGTTTTTTAACACACGCCCCCTTATTCGATTTCTCACCCACCCAAAGCCACTCACTCTCTCTTCTCTCTCTCTGAAGCGATGTCATCGACGTTTCGAGCTCCGGCGGGAGCCGCTACTGTGTTTACGGCGGATCAGAAGATCAGACTTGGGAGGCTCGACGCTCTGAGATCCTCTCATTCTGTTTTCTTAGGAAGATATGGACGCGGCGGCGTCCCGGTTCCTCCTTCCGCTTCTTCGTCGAGTTCTTCGCCTATTCAAGCCGTCTCCACTCCTGCGAAGCCTGAGACTGCGACCAAGCGGAGCAAAGTCGAAATTATCAAGGAGAAGAGTAATTTCATAAGGTATCCTTTGAACGAGGAGCTTTTAACAGAGGCTCCAAATGTCAACGAGTCAGCCGTGCAGCTTATCAAGTTCCACGGTAGCTACCAACAGTACAACAGAGAAGAACGTGGTGGAAGATCTTACTCCTTCATGCTTCGAACTAAGAATCCATCTGGGAAGGTCCCTAACCAGCTCTATTTGACTATGGATGACTTAGCTGATGAGTTTGGAATTGGTACTCTTCGTTTGACCACAAGGCAGACGTTTCAGCTTCATGGTGTTCTGAAGCAGAATCTTAAGACTGTGATGAGCTCGATTATTAAAAATATGGGTAGCACGCTTGGTGCATGTGGTGATCTGAACAGAAATGTTCTTGCTCCTGCTGCACCTTATGTGAAGAAAGACTATCTCTTTGCACAAGAAACTGCTGACAACATTGCGGCTCTTCTTTCTCCTCAATCAGGGTTCTATTATGATATGTGGGTTGATGGAGAGCAGTTCATGACTGCTGAACCTCCAGAGGTAGTGAAGGCTCGAAATGATAACTCCCATGGAACTAACTTTGTCGACTCTCCTGAGCCCATCTATGGCACCCAGTTCTTGCCTAGAAAGTTCAAGGTCGCTGTAACTGTTCCTACAGATAATTCCGTCGACCTCCTCACCAATGACATTGGCGTTGTTGTTGTTTCAGATGAAAATGGGGAACCACAGGGTTTCAATATTTATGTTGGTGGGGGTATGGGAAGAACACACAGAATGGAGTCTACTTTTGCCCGCCTGGCAGAACCAATAGGTTATGTTCCAAAGGAAGATATTTTGTATGCTGTGAAGGCCATTGTAGTCACACAGCGAGAACACGGGAGACGAGATGATCGTAAATATAGCAGAATGAAATATTTGATCAGCTCCTGGGGAATTGAGAAGTTCAGAGATGTTGTTGAGCAATATTATGGTAAAAAGTTTGAGCCTTCCCGTGAACTTCCAGAGTGGGAGTTCAAGAGTTACTTGGGATGGCATGAACAGGGAGATGGTGCATGGTTTTGTGGGCTTCACGTAGACAGTGGTCGTGTTGGAGGTATAATGAAGAAGACGCTGAGAGAAGTAATAGAGAAATACAAAATTGATGTCCGCATCACACCAAACCAAAACATTGTCTTGTGTGATATAAAGACTGAATGGAAGCGTCCCATCACCACAGTACTTGCTCAGGCCGGCTTACTGCAACCTGAGTTTGTCGACCCATTAAACCAAACTGCAATGGCTTGCCCAGCTTTTCCTTTGTGCCCTCTGGCAATAACTGAGGCAGAGCGCGGGATCCCCAGCATTCTAAAGAGAGTTAGGGCAATGTTTGAAAAGGTTGGTCTGGACTACGACGAGTCTGTTGTGATAAGAGTAACCGGTTGTCCAAACGGCTGTGCAAGACCGTACATGGCTGAGCTCGGTCTAGTCGGGGATGGTCCCAACAGCTATCAGGTTTGGCTAGGAGGAACACCGAACCTGACCCAGATAGCGAGAAGTTTCATGGATAAGGTTAAGGTTCACGACTTAGAGAAAGTCTGCGAGCCATTGTTCTATCACTGGAAACTAGAGAGGCAAACTAAAGAATCATTTGGAGAATACACAACCCGCATGGGATTCGAGAAACTGAAGGAGCTGATAGATACATACAAAGGAGTTTCTCAATGAGCACAACAGAGATCATCTTTCGTTTTATAATTCATGTAATGTAATGTCTCTGTCTGAACTGTTACTCTTCGGTAACTCTGATGGAGAACTTGTTCTCGTTTTGGTTTGATTTTGTACCCTCTTTTTTTTTTTTGTTTTTTTGGATTGCTTTGTCTTTGATTGGATAATGAAGCATTACTGTATCAAGGCTAATTAGCCCATCAATAAGCCTTTTTAAAGCTCTGGATATGGAAAAGTCAGAACCTCTCTCTCTTATCTCTCTAAATTTTAGAGAGAGAGAGATTTTGTTCGATGTTTTGCATGCTTTACCAGCTTATGAATCCGGATGTGATCCGGTTTTGTCGATCTATCTCGCTGTCCTATCTCGCCGTCCGGTGTATCCGGTGTTGTTTACGGCTATCCCGTTGCCGTTCTGTTTGTTTCACCGAATTGATTTGGGAAACAATTTGATATCAGTTTTTTCTTCTTTTCTAACTGGAAATTTTCATGGCCTTCTCTCGATCCGTTCCACCACCATCCACAATCAGGTAAGTGTTTTGGTGTTTCGATTGGGCGACTGTTTTAGTCTCATCCACATGAATCAATATCCAGATTTGGGCGAATTCTGGGTTGCTTGACTCCTTCCAACCGTTATAGTTGAAACGGTCCGGCGTTTTTGACGGCTTCAATCACCTCATTTGAGGTCCGTCTTGCCATTCCAGGAAGTCAAGATATCAATTTCCGAAGTCTATTCTTATTAGCAAGTGATGACAAGAGATCAGAAGCTTCACCTCGTGGTTGATTGTTTGCTGACAACTTCTTTCATGCTTTTGTTCTCGGAAAAGATCCAGTGATGAGAAGAGAAAGAATTTGAAGATTAAATTGAATCTTTTATCTTTTTCGGTTTAATAGTTGTTTGTTTTTATAATCCGGAGATGTTTCCGGTTGTTCACTCGCCGGAAATTGTGCCGGCTTCTGTCTGCATATTTTGCTGAAGGGGTTGTGGGTACCGGTTTACTAGGTTATCCGGTTCACCCGGTTTGTAAGATTGGTTTAATGAATAAAAATCCCTTATGAGAAAAAAAAA
CDS Sequence
Protein Sequence