Gene Details:
- Gene ID: AT5G03415
- Gene Symbol: ATDPB, DPB
- Gene Name:
- Description: Transcription factor DP;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure
Literature:
- Characterization of two distinct DP-related genes from Arabidopsis thaliana. DOI: 10.1016/s0014-5793(00)02238-9 ; PMID: 11108847
- E2Ls, E2F-like repressors of Arabidopsis that bind to E2F sites in a monomeric form. DOI: 10.1074/jbc.M200913200 ; PMID: 11867638
- Interaction of the Arabidopsis E2F and DP proteins confers their concomitant nuclear translocation and transactivation. DOI: 10.1104/pp.010642 ; PMID: 11891240
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- The role of the Arabidopsis E2FB transcription factor in regulating auxin-dependent cell division. DOI: 10.1105/tpc.105.033761 ; PMID: 16055635
- Eukaryotic transcription factors in plastids–Bioinformatic assessment and implications for the evolution of gene expression machineries in plants. DOI: 10.1016/j.gene.2006.06.022 ; PMID: 16934950
- The balance between cell division and endoreplication depends on E2FC-DPB, transcription factors regulated by the ubiquitin-SCFSKP2A pathway in Arabidopsis. DOI: 10.1105/tpc.105.039651 ; PMID: 16920782
- In silico comparison of transcript abundances during Arabidopsis thaliana and Glycine max resistance to Fusarium virguliforme. DOI: 10.1186/1471-2164-9-S2-S6 ; PMID: 18831797
- SKP2A, an F-box protein that regulates cell division, is degraded via the ubiquitin pathway. DOI: 10.1111/j.1365-313X.2007.03378.x ; PMID: 18036202
- Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. DOI: 10.1038/msb.2010.53 ; PMID: 20706207
- The Arabidopsis cell cycle F-box protein SKP2A binds to auxin. DOI: 10.1105/tpc.110.078972 ; PMID: 21139066
- DREAM complex suppresses DNA methylation maintenance genes and precludes DNA hypermethylation. DOI: 10.1038/s41477-020-0710-7 ; PMID: 32661276
- The DREAM complex represses growth in response to DNA damage in Arabidopsis. DOI: 10.26508/lsa.202101141 ; PMID: 34583930
- Global analysis of the core cell cycle regulators of Arabidopsis identifies novel genes, reveals multiple and highly specific profiles of expression and provides a coherent model for plant cell cycle control. DOI: 10.1111/j.1365-313X.2004.02319.x ; PMID: 15686519
Sequences:
cDNA Sequence
- >AT5G03415.2
AGCCAACAAAAGAAGAAGACGAAGATAATTTTAGTGTTTAGCCAAAATAAAAATAAAAAGATAATTCCAGTATTATATTCTGATTAACAAAAGACCTAAATTTCACTAAAGAGAATTAATCTTTTGGTAAAATAAAAAAAAAGTAAAGAAAATTATCTTCTTTAACTTTTTGTTTTTTTTTCACCTATGAGTCAGTTTGGTCCCTCTCTCTCTCTCTCATTGTGGACATCTTTTCACCATCGCACAAATAACAAGCCTCCCAACCCCGATCGACTTATCCTCCTCCTTCTCCGGCGAAATCCATTAACTCTCCGCCGCGAAAACCACCTTTCCAGAGTAGTATCACACTAAGAATTCTAATGTTGATCCGCCATTATTGAAGCTTCTAATTCTCGTTAATAACCAAAAACCCAAGTCGATTTTCAAGTAGCGCGGTAGTTAGTTTTAGGTGGAAGAAGAATGACAACTACTGGGTCTAATTCTAATCACAACCACCATGAAAGCAATAATAACAACAATAACCCTAGTACTAGGTCTTGGGGCACGGCGGTTTCAGGTCAATCTGTGTCTACTAGCGGCAGTATGGGCTCTCCGTCGAGCCGGAGTGAGCAAACCATCACCGTTGTTACATCTACTAGCGACACTACTTTTCAACGCCTGAATAATTTGGACATTCAAGGTGATGATGCTGGTTCTCAAGGAGCTTCTGGTGTTAAGAAGAAGAAGAGGGGACAGCGTGCGGCTGGTCCAGATAAGACTGGAAGAGGACTACTTTGTGAAAAGGTGGAAAGCAAAGGAAGGACAACTTACAATGAGGTTGCAGACGAGCTTGTTGCTGAATTTGCACTTCCAAATAACGATGGAACATCCCCTGATCAGCAACAGTATGATGAGAAAAACATAAGACGAAGAGTATATGATGCTTTAAACGTCCTCATGGCTATGGATATAATATCCAAGGATAAAAAAGAAATTCAATGGAGAGGTCTTCCTCGGACAAGCTTAAGCGACATTGAAGAATTAAAGAACGAACGACTCTCACTTAGGAACAGAATTGAGAAGAAAACTGCATATTCCCAAGAACTGGAAGAACAATATGTAGGCCTTCAGAATCTGATACAGAGAAATGAGCACTTATATAGCTCAGGAAATGCTCCCAGTGGCGGTGTTGCTCTTCCTTTTATCCTTGTCCAGACTCGTCCTCACGCAACAGTAGAAGTGGAGATATCAGAAGATATGCAGCTCGTGCATTTTGATTTCAACAGCACTCCATTTGAGCTCCACGACGACAATTTTGTCCTCAAGACTATGAAGTTTTGTGATCAACCGCCGCAACAACCAAACGGTCGGAACAACAGCCAGCTGGTTTGTCACAATTTCACGCCAGAAAACCCTAACAAAGGCCCCAGCACAGGTCCAACACCGCAGCTGGATATGTACGAGACTCATCTTCAATCGCAACAACATCAGCAGCATTCTCAGCTACAAATCATTCCTATGCCTGAGACTAACAACGTTACTTCCAGCGCTGATACTGCTCCAGTGAAATCCCCGTCTCTTCCAGGGATAATGAACTCCAGCATGAAGCCGGAGAATTGAAACACGTATGAAGGCCCCTTGTACAATTTCTGTAAAACTGTAAAGTAGCTCTTGAAAAACTTTACCTGGTTTTTTGACGAATAGTCTGTTTAGCGGTAAATGTACCGGTGGTTTATCGAATCTAGGATCCTTGTCGGGTTTAGCGATTTTAAGAATCTTTGCCATAGGAAAAAAAAAACACTTTGCTCTGTGGTGTAGAAATGAATTTTATTAACCATT - >AT5G03415.1
AGCCAACAAAAGAAGAAGACGAAGATAATTTTAGTGTTTAGCCAAAATAAAAATAAAAAGATAATTCCAGTATTATATTCTGATTAACAAAAGACCTAAATTTCACTAAAGAGAATTAATCTTTTGGTAAAATAAAAAAAAAGTAAAGAAAATTATCTTCTTTAACTTTTTGTTTTTTTTTCACCTATGAGTCAGTTTGGTCCCTCTCTCTCTCTCTCATTGTGGACATCTTTTCACCATCGCACAAATAACAAGCCTCCCAACCCCGATCGACTTATCCTCCTCCTTCTCCGGCGAAATCCATTAACTCTCCGCCGCGAAAACCACCTTTCCAGAGTAGTATCACACTAAGAATTCTAATGTTGATCCGCCATTATTGAAGCTTCTAATTCTCGTTAATAACCAAAAACCCAAGTCGATTTTCAAGTAGCGCGGTAGTTAGTTTTAGGTGGAAGAAGAATGACAACTACTGGGTCTAATTCTAATCACAACCACCATGAAAGCAATAATAACAACAATAACCCTAGTACTAGGTCTTGGGGCACGGCGGTTTCAGGTCAATCTGTGTCTACTAGCGGCAGTATGGGCTCTCCGTCGAGCCGGAGTGAGCAAACCATCACCGTTGTTACATCTACTAGCGACACTACTTTTCAACGCCTGAATAATTTGGACATTCAAGGTGATGATGCTGGTTCTCAAGGAGCTTCTGGTGTTAAGAAGAAGAAGAGGGGACAGCGTGCGGCTGGTCCAGATAAGACTGGAAGAGGACTACTTTGTGAAAAGGTGGAAAGCAAAGGAAGGACAACTTACAATGAGGTTGCAGACGAGCTTGTTGCTGAATTTGCACTTCCAAATAACGATGGAACATCCCCTGATCAGCAACAGTATGATGAGAAAAACATAAGACGAAGAGTATATGATGCTTTAAACGTCCTCATGGCTATGGATATAATATCCAAGGATAAAAAAGAAATTCAATGGAGAGGTCTTCCTCGGACAAGCTTAAGCGACATTGAAGAATTAAAGAACGAACGACTCTCACTTAGGAACAGAATTGAGAAGAAAACTGCATATTCCCAAGAACTGGAAGAACAATATGTAGGCCTTCAGAATCTGATACAGAGAAATGAGCACTTATATAGCTCAGGAAATGCTCCCAGTGGCGGTGTTGCTCTTCCTTTTATCCTTGTCCAGACTCGTCCTCACGCAACAGTAGAAGTGGAGATATCAGAAGATATGCAGCTCGTGCATTTTGATTTCAACAGCACTCCATTTGAGCTCCACGACGACAATTTTGTCCTCAAGACTATGAAGTTTTGTGATCAACCGCCGCAACAACCAAACGGTCGGAACAACAGCCAGCTGGTTTGTCACAATTTCACGCCAGAAAACCCTAACAAAGGCCCCAGCACAGGTCCAACACCGCAGCTGGATATGTACGAGACTCATCTTCAATCGCAACAACATCAGCAGCATTCTCAGCTACAAATCATTCCTATGCCTGAGACTAACAACGTTACTTCCAGCGCTGATACTGCTCCAGTGAAATCCCCGTCTCTTCCAGGGATAATGAACTCCAGCATGAAGCCGGAGAATTGAAACACGTATGAAGGCCCCTTGTACAATTTCTGTAAAACTGTAAAGTAGCTCTTGAAAAACTTTACCTGGTTTTTTGACGAATAGTCTGTTTAGCGGTAAATGTACCGGTGGTTTATCGAATCTAGGATCCTTGTCGGGTTTAGCGATTTTAAGAATCTTTGCCATAGGAAAAAAAAAACACTTTGCTCTGTGGTGTAGAAATGAATTTTATTAACCATT
CDS Sequence
Protein Sequence