Information report for AT5G03260
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , fruit , root , vascular leaf , flower
Literature and News
- Gene structure and molecular analysis of the laccase-like multicopper oxidase (LMCO) gene family in Arabidopsis thaliana. DOI: 10.1007/s00425-004-1472-6 ; PMID: 15940465
- TRANSPARENT TESTA10 encodes a laccase-like enzyme involved in oxidative polymerization of flavonoids in Arabidopsis seed coat. DOI: 10.1105/tpc.105.035154 ; PMID: 16243908
- Mutant identification and characterization of the laccase gene family in Arabidopsis. DOI: 10.1093/jxb/erl022 ; PMID: 16804053
- MicroRNA-mediated systemic down-regulation of copper protein expression in response to low copper availability in Arabidopsis. DOI: 10.1074/jbc.M801406200 ; PMID: 18408011
- GeneCAT–novel webtools that combine BLAST and co-expression analyses. DOI: 10.1093/nar/gkn292 ; PMID: 18480120
- CressExpress: a tool for large-scale mining of expression data from Arabidopsis. DOI: 10.1104/pp.107.115535 ; PMID: 18467456
- Functional characterization of four APETALA2-family genes (RAP2.6, RAP2.6L, DREB19 and DREB26) in Arabidopsis. DOI: 10.1007/s11103-010-9711-7 ; PMID: 21069430
- The laccase multigene family in Arabidopsis thaliana: towards addressing the mystery of their gene function(s). DOI: 10.1007/s00425-010-1298-3 ; PMID: 21063888
- Disruption of LACCASE4 and 17 results in tissue-specific alterations to lignification of Arabidopsis thaliana stems. DOI: 10.1105/tpc.110.082792 ; PMID: 21447792
- Laccase is necessary and nonredundant with peroxidase for lignin polymerization during vascular development in Arabidopsis. DOI: 10.1105/tpc.113.117770 ; PMID: 24143805
- Transcript and metabolite network perturbations in lignin biosynthetic mutants of Arabidopsis. DOI: 10.1093/plphys/kiac344 ; PMID: 35880844
- Cloning and sequence analysis of laccase-encoding cDNA clones from tobacco. DOI: 10.1016/0378-1119(96)00381-2 ; PMID: 8921917
- a in poplar. DOI: 10.1046/j.1432-1327.1999.00061.x ; PMID: 9914531
Gene Resources
- UniProt: A0A654FYB0
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A654FYB0
- EnsemblPlants: AT5G03260.1
- Gramene: AT5G03260.1
- KEGG: ath:AT5G03260
- Orthologous matrix: VQYNMSI
- ExpressionAtlas: AT5G03260
- InterPro: IPR001117, IPR002355, IPR008972
- PANTHER: PTHR11709, PTHR11709:SF207
- SUPFAM: SSF49503
- PROSITE: PS00079, PS00080
- Gene3D: 2.60.40.420
- OrthoDB: A0A654FYB0
- SWISS-MODEL: A0A654FYB0
- Conserved Domain Database: cd13849, cd13875, cd13897
Sequences
cDNA Sequence
- >AT5G03260.1
ACAACATTTTGTATAACCAAAAGCAGTAGAAGATTAAGTACAAATAAAATCTCATCATTGCATCAAACCGGAAAATTGAACCGGAGATGAAGATGGGTTTTCTCTTTCTATTCTGTTATCTTCTTGCGTTTCTTGGCTATTCTCCGGTGGATGCGGCGGTGAAGAAGTACCAATTCGATGTTCAAGTGAAGAACATAAGCCGGATATGCAATGCTAAACCGATTGTCACGGTTAATGGAATGTTCCCTGGACCGACGGTTTACGCAAGAGAAGGTGATCGAGTCATCATCAACGTAACCAACCATGTACAATACAACATGTCCATCCATTGGCATGGGCTTAAACAGTACCGGAACGGTTGGGCAGATGGTCCAGCATACATAACTCAGTGTCCGATCCAAACAGGACAGAGTTACCTTTATGATTTCAATGTGACCGGACAACGCGGGACCCTCTGGTGGCACGCACACATCCTCTGGCTACGAGCCACCGTCTACGGAGCTATTGTTATCTTGCCTGCACCGGGAAAACCGTATCCGTTCCCACAGCCATACCAAGAATCTAACATAATCCTCGGAGAATGGTGGAACAAAGACGTTGAGACTGCGGTTAACCAAGCCAACCAATTGGGTGCACCGCCTCCGATGTCGGATGCTCATACCATTAACGGAAAACCTGGACCGCTATTTCCATGTTCCGAGAAACACACGTTCGTCATAGAGGCCGAAGCGGGTAAAACATATCTTCTAAGGATTATCAACGCAGCTTTAAACGACGAGCTATTCTTCGGGATTGCGGGACACAACATGACCGTGGTGGAAATCGATGCGGTCTACACTAAACCATTCACAACCAAAGCCATTTTACTCGGACCAGGTCAAACCACTAATGTTTTAGTCAAAACCGACCGGTCACCAAACCGCTACTTCATGGCAGCTAGTCCGTTTATGGACGCTCCTGTATCCGTAGACAACAAAACAGTAACCGCTATTCTTCAATACAAAGGCGTACCAAACACGGTCTTACCAATCCTACCAAAGCTTCCTTTGCCTAACGACACATCATTTGCTTTGGACTATAACGGAAAGCTCAAGAGCCTCAACACACCGAATTTTCCGGCTCTTGTTCCTTTAAAAGTCGACAGGCGATTGTTCTACACGATCGGGCTAGGCATTAACGCGTGCCCGACTTGTGTTAACGGGACAAATCTCGCAGCTTCTATAAACAATATCACATTCATTATGCCCAAAACTGCACTCTTGAAAGCACATTACTCCAACATCTCAGGTGTTTTCAGGACTGATTTCCCAGACCGACCACCCAAAGCGTTTAACTACACCGGTGTGCCGCTCACGGCTAACCTTGGAACATCAACGGGGACAAGACTTAGCCGAGTTAAGTTCAATACTACAATTGAGCTCGTCTTGCAAGACACCAATCTCCTAACCGTTGAGTCACACCCTTTCCATCTTCATGGCTACAACTTCTTTGTCGTTGGAACCGGTGTTGGAAACTTTGATCCCAAGAAAGATCCTGCTAAGTTCAATCTCGTTGACCCGCCTGAGAGAAACACCGTTGGAGTACCTACCGGTGGTTGGGCTGCCATCAGATTCAGGGCTGATAATCCAGGTGTTTGGTTTATGCACTGTCACTTGGAAGTCCATACAATGTGGGGTTTGAAGATGGCTTTCGTCGTCGAGAACGGGGAAACACCTGAGCTTTCCGTTCTACCACCGCCTAAAGACTATCCGTCCTGTTAAGAATCTGAGATGGGAACACTACTCTGATTCTTCGTCTTTATTTGTTAAGTTTCGCTGATGATATTCTTTGTTGATTGTATTTCCCTTCTGTTGATTTGTGTCTGAGATTGTTTCCTATGGGGCTGCATAACATAATACACCCCGAAATTGCATAAGAAATGAAATTAATTTTCTCTG
CDS Sequence
Protein Sequence