Information report for AT5G03150
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Genome-wide ORFeome cloning and analysis of Arabidopsis transcription factor genes. DOI: 10.1104/pp.104.042176 ; PMID: 15208423
- Conservation, diversification and expansion of C2H2 zinc finger proteins in the Arabidopsis thaliana genome. DOI: 10.1186/1471-2164-5-39 ; PMID: 15236668
- Transcriptional profile of the Arabidopsis root quiescent center. DOI: 10.1105/tpc.105.031724 ; PMID: 15937229
- A C2H2-type zinc finger protein, SGR5, is involved in early events of gravitropism in Arabidopsis inflorescence stems. DOI: 10.1111/j.1365-313X.2006.02807.x ; PMID: 16813575
- The maize INDETERMINATE1 flowering time regulator defines a highly conserved zinc finger protein family in higher plants. DOI: 10.1186/1471-2164-7-158 ; PMID: 16784536
- JACKDAW controls epidermal patterning in the Arabidopsis root meristem through a non-cell-autonomous mechanism. DOI: 10.1242/dev.048777 ; PMID: 20356954
- Activity of transcription factor JACKDAW is essential for SHR/SCR-dependent activation of SCARECROW and MAGPIE and is modulated by reciprocal interactions with MAGPIE, SCARECROW and SHORT ROOT. DOI: 10.1007/s11103-011-9826-5 ; PMID: 21935722
- An essential protein that interacts with endosomes and promotes movement of the SHORT-ROOT transcription factor. DOI: 10.1016/j.cub.2011.08.013 ; PMID: 21924907
- Arabidopsis BIRD Zinc Finger Proteins Jointly Stabilize Tissue Boundaries by Confining the Cell Fate Regulator SHORT-ROOT and Contributing to Fate Specification. DOI: 10.1105/tpc.114.132407 ; PMID: 25829440
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Transcriptional control of tissue formation throughout root development. DOI: 10.1126/science.aad1171 ; PMID: 26494755
- Regulation of Hormonal Control, Cell Reprogramming, and Patterning during De Novo Root Organogenesis. DOI: 10.1104/pp.17.00980 ; PMID: 29233938
Gene Resources
- UniProt: A0A5S9Y1R8
- EMBL: CACRSJ010000110, CACSHJ010000096
- AlphaFoldDB: A0A5S9Y1R8
- EnsemblPlants: AT5G03150.1
- Gramene: AT5G03150.1
- KEGG: ath:AT5G03150
- Orthologous matrix: FFAGPTM
- ExpressionAtlas: AT5G03150
- InterPro: IPR013087, IPR031140, IPR036236
- PANTHER: PTHR10593, PTHR10593:SF231
- SUPFAM: SSF57667
- PROSITE: PS00028, PS50157
- Gene3D: 3.30.160.60
- OrthoDB: A0A5S9Y1R8
- SWISS-MODEL: A0A5S9Y1R8
Sequences
cDNA Sequence
- >AT5G03150.1
TACATCTCCCAGATCTCTCAACATTATTTATACAATTTTTTCTTTTATTCCTGCAAGAGTTTTTTTTTGTTTATAACAACAAATCCTCTTTCAATATAATCTTTATATATACGTATACTTTCGTGCCTTGAAATTTTCTTCCTCATCTTCTTTGGTCTTTTCTTGTCATTTGGCATAACCAAAGAGTCAAGCACATTCAAACATTCTCAAGCCCTAAAACCCAAAAAAAACTTATATGCTCTTGTTCTTGTTCTTCTTCTCCCCTCAGCATATTAAACCCTAATTAACTATCTCTTTTGTTTGTATACTGTTATAAACCTCCTGATCATCTTCTTGTTTTCTTGCAAGATTTTATAAAAAAAAAACAAAACCCAGCTGTTCTTGTTCTTGTTCTTTAGCTCCGATCCGTTTTAAATTAAAACACAGATATGCAGATGATTCCAGGAGATCCATTTTCTATTTCATCCTCCATGGGAGGGTTTGTTCATCAAGAAACACACCTTCATCATCTTCAGCAGCAGATCCCTGACCTTAACCCTAATTCTAACCCTAACCCAAATGCGAAACCAAACTCTTCATCAGCCAAGAAGAAGAGAAATCAACCTGGCACTCCAGATCCAGATGCTGATGTCATCGCTCTATCGCCAACAACACTCATGGCAACAAACAGATTCGTGTGCGAGATCTGCAACAAAGGGTTTCAAAGGGACCAGAATTTACAACTACATCGCCGTGGCCACAACCTTCCATGGAAGCTAAAGCAACGGTCCAAACAAGAAGTGATAAAGAAGAAAGTATACATATGTCCTATCAAGACTTGTGTACACCATGATGCCTCCAGGGCCCTTGGAGACCTCACTGGGATCAAGAAACACTACAGCCGCAAACACGGTGAAAAGAAGTGGAAGTGTGAAAAGTGTTCTAAGAAATACGCTGTTCAGTCTGATTGGAAGGCACATGCGAAAACTTGTGGTACTCGTGAGTATAAATGTGACTGTGGCACGTTGTTCTCCAGGAAAGATAGTTTCATCACACATAGAGCGTTCTGCGACGCATTAACTGAGGAAGGAGCGAGGATGAGTTCACTTAGTAACAACAATCCGGTGATCTCTACGACGAATCTGAATTTTGGAAATGAGTCAAATGTTATGAATAATCCAAATCTTCCTCATGGATTTGTACACCGAGGAGTTCATCATCCCGACATTAATGCTGCTATCTCTCAATTCGGTCTAGGGTTTGGACATGACCTAAGTGCAATGCATGCGCAAGGTCTATCCGAGATGGTTCAAATGGCCTCCACCGGCAACCACCACCTCTTCCCGTCGTCATCATCATCCCTCCCTGATTTCTCCGGCCACCACCAATTCCAAATTCCAATGACTTCCACAAACCCTAGTCTCACCTTATCATCATCCTCAACATCACAACAAACCTCAGCTTCACTACAACACCAAACCCTAAAAGACTCATCTTTCTCACCACTCTTCTCCTCTTCCTCCGAAAACAAACAAAACAAGCCTCTCTCTCCAATGTCTGCCACAGCTCTCTTACAAAAAGCTGCACAAATGGGCTCTACTAGAAGCAATTCCTCCACCGCTCCGTCATTCTTCGCCGGCCCAACAATGACATCCTCCTCGGCCACCGCTTCTCCTCCTCCTAGATCGTCTTCTCCAATGATGATCCAACAACAACTAAACAACTTCAACACCAATGTCTTAAGAGAGAATCATAATCGTGCTCCTCCTCCTCTTAGTGGTGTCTCCACTAGTAGTGTGGATAATAATCCCTTTCAATCGAACCGATCGGGTCTAAACCCGGCTCAACAGATGGGTCTAACCCGGGATTTTCTTGGAGTGAGCAACGAGCATCACCCTCACCAAACGGGTCGTCGTCCGTTTTTGCCTCAAGAACTCGCAAGGTTTGCTCCATTGGGTTGATTATGTGTTTAATTAGGTACTGTGTGGGGGGGACAAGATTTTGGGTTTAATTAGGATTGGAAGTTCCTTTGAGGAGACAAGTCTAATTAAGAACCGTACCCCCTTGTGAAGCGGTCGGAATGTGGGGACAAAGGTTGACAAGACATCATCATATCAATTTACATTGAATGTTATGTACTTTTTTACTATGTTTATGATTATCGCAATTCACATAATATATACCACCATGACATGCATGGATATGTATTTCCGACATTGTCGTTTTGTAAATGTTGTTTATTTTTTCTCGTTCTTGTAATGACATTCAAAAAATTGGTAAATCTTCAGGCTTTTCCAAGTTTGTTAACGAA
CDS Sequence
Protein Sequence