Information report for AT5G03040
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- DNA array analyses of Arabidopsis thaliana lacking a vacuolar Na+/H+ antiporter: impact of AtNHX1 on gene expression. DOI: 10.1111/j.1365-313X.2004.02253.x ; PMID: 15546358
- Arabidopsis IQD1, a novel calmodulin-binding nuclear protein, stimulates glucosinolate accumulation and plant defense. DOI: 10.1111/j.1365-313X.2005.02435.x ; PMID: 15960618
- Genome-wide comparative analysis of the IQD gene families in Arabidopsis thaliana and Oryza sativa. DOI: 10.1186/1471-2148-5-72 ; PMID: 16368012
- GeneCAT–novel webtools that combine BLAST and co-expression analyses. DOI: 10.1093/nar/gkn292 ; PMID: 18480120
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The IQD Family of Calmodulin-Binding Proteins Links Calcium Signaling to Microtubules, Membrane Subdomains, and the Nucleus. DOI: 10.1104/pp.16.01743 ; PMID: 28115582
- Functions of IQD proteins as hubs in cellular calcium and auxin signaling: A toolbox for shape formation and tissue-specification in plants? DOI: 10.1080/15592324.2017.1331198 ; PMID: 28534650
- Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. DOI: 10.1074/mcp.T300006-MCP200 ; PMID: 14506206
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
Gene Resources
- UniProt: A0A178UAZ3
- EMBL: CACSHJ010000096, LR881470, LUHQ01000005
- AlphaFoldDB: A0A178UAZ3
- EnsemblPlants: AT5G03040.1, AT5G03040.2, AT5G03040.3
- Gramene: AT5G03040.1, AT5G03040.2, AT5G03040.3
- KEGG: ath:AT5G03040
- Orthologous matrix: SWMERRM
- ExpressionAtlas: AT5G03040
- InterPro: IPR000048, IPR025064
- PANTHER: PTHR32295, PTHR32295:SF175
- PROSITE: PS50096
- OrthoDB: A0A178UAZ3
- SWISS-MODEL: A0A178UAZ3
- Conserved Domain Database: cd23767
Sequences
cDNA Sequence
- >AT5G03040.2
ATCTGTCTTCTCCTCTCTCTCTCTTCTCCATTTGCAATTATGATAATGTGAAAGCAATTCGAAGAAGAAAAGTTATCTTCGCACCTCAGCAAAGATCCAATCGATTCGATTCTTAAGCTTTTTCGTCTTCTCCGATAAGGTCACTACTTAGAAGCCGCGTTGTGGTTTAGTTGACTCCTCCAGGTTTTATCTTCAAGCTTTTTCGTCTATCAGATCTGGTGTCACTGTCTTCTCATAGAGATGGGGAAAAAAGCTAAATGGTTTTCAAGTGTTAAGAAAGCATTCAGCCCAGATTCAAAGAAGTCGAAGCAAAAATTGGCTGAGGGACAAAATGGTGTTATCTCTAATCCTCCTGTTGTGGATAATGTTAGACAATCTTCTTCTTCTCCTCCTCCTGCTCTTGCTCCTCGTGAAGTGAGAGTAGCTGAAGTGATTGTTGAACGGAACAGGGATCTTTCACCTCCTTCTACAGCAGATGCTGTGAATGTTACAGCTACTGATGTTCCTGTAGTTCCATCTTCATCTGCTCCTGGTGTTGTTCGTCGCGCTACACCTACTCGATTTGCTGGAAAGTCAAACGAAGAAGCCGCTGCTATCTTGATCCAGACTATATTTAGAGGTTATTTGGCAAGGAGAGCGTTGCGGGCAATGAGGGGTTTGGTCAGACTTAAGTTATTGATGGAAGGATCTGTTGTTAAGCGGCAAGCTGCAAATACTCTAAAATGTATGCAGACTCTCTCTCGTGTACAGTCGCAGATCCGAGCTAGGAGAATCAGGATGTCAGAAGAGAATCAGGCTCGCCAGAAACAACTCCTTCAGAAACATGCTAAAGAGCTAGCTGGCTTGAAGAACGGGGATAACTGGAATGATAGCATTCAATCAAAGGAGAAAGTTGAAGCGAATTTGCTAAGCAAGTACGAGGCAACAATGAGAAGGGAAAGGGCATTGGCTTATTCATACTCTCATCAGCAAAACTGGAAGAACAACTCTAAATCTGGAAACCCGATGTTCATGGATCCAAGCAACCCGACATGGGGTTGGAGCTGGTTAGAGAGATGGATGGCTGGTAGGCCACTAGAGAGTTCCGAGAAAGAACAAAGCAACAGCAACAATGACAATGCTGCCTCGGTCAAGGGCTCTATTAACCGCAACGAAGCTGCAAAATCTCTAACCCGCAATGGCTCAACTCAACCAAACACACCATCATCCGCAAGAGGGACCCCAAGAAACAAAAACAGTTTCTTCTCACCTCCAACTCCCTCAAGGCTAAACCAATCCTCGAGGAAATCCAATGACGACGACTCCAAAAGCACAATCTCGGTCCTGTCCGAGAGGAACCGCAGACACAGCATTGCTGGTTCATCAGTCAGAGACGATGAGAGCCTCGCTGGCTCACCAGCTCTCCCGAGCTACATGGTTCCAACTAAATCAGCTCGAGCCAGGCTCAAGCCCCAAAGCCCATTAGGTGGTACCACACAGGAAAACGAAGGGTTCACAGACAAGGCATCAGCTAAGAAACGGCTCTCGTATCCAACTTCGCCTGCATTGCCTAAACCACGGCGGTTCTCAGCTCCCCCTAAGGTGGAGAGTGGCGGCGTTACCGTGACCAACGGAGCAGGCAGCTGAGGTATTTTATTTAATATAATTATTTTCCCACTTATGAATGTGTCCGAGATTGTTGTCTCTTATGTGTTCCCTTCATTTCGTAATTCATTTGTGCAGTGTAAGCGCCAGTCATTTATTTTTTTACTATAATAAATTTTATAACCTTTTAAAATTCATGTTCTTTTGTTTCTTTGAATATTTAAGTTATTTTTATTAATGTTGGATGAATTGGAATATGATGATGTTATTTGTATTGTAATGCAGATCCTTTAAAGCTTAATTAATTTGTAATACCTTTT - >AT5G03040.3
ATCTGTCTTCTCCTCTCTCTCTCTTCTCCATTTGCAATTATGATAATGTGAAAGCAATTCGAAGAAGAAAAGTTATCTTCGCACCTCAGCAAAGATCCAATCGATTCGATTCTTAAGCTTTTTCGTCTTCTCCGATAAGGTCACTACTTAGAAGCCGCGTTGTGGTTTAGTTGACTCCTCCAGGTTTTATCTTCAAGCTTTTTCGTCTATCAGATCTGGTGTCACTGTCTTCTCATAGAGATGGGGAAAAAAGCTAAATGGTTTTCAAGTGTTAAGAAAGCATTCAGCCCAGATTCAAAGAAGTCGAAGCAAAAATTGGCTGAGGGACAAAATGGTGTTATCTCTAATCCTCCTGTTGTGGATAATGTTAGACAATCTTCTTCTTCTCCTCCTCCTGCTCTTGCTCCTCGTGAAGTGAGAGTAGCTGAAGTGATTGTTGAACGGAACAGGGATCTTTCACCTCCTTCTACAGCAGATGCTGTGAATGTTACAGCTACTGATGTTCCTGTAGTTCCATCTTCATCTGCTCCTGGTGTTGTTCGTCGCGCTACACCTACTCGATTTGCTGGAAAGTCAAACGAAGAAGCCGCTGCTATCTTGATCCAGACTATATTTAGAGGTTATTTGGCAAGGAGAGCGTTGCGGGCAATGAGGGGTTTGGTCAGACTTAAGTTATTGATGGAAGGATCTGTTGTTAAGCGGCAAGCTGCAAATACTCTAAAATGTATGCAGACTCTCTCTCGTGTACAGTCGCAGATCCGAGCTAGGAGAATCAGGATGTCAGAAGAGAATCAGGCTCGCCAGAAACAACTCCTTCAGAAACATGCTAAAGAGCTAGCTGGCTTGAAGAACGGGGATAACTGGAATGATAGCATTCAATCAAAGGAGAAAGTTGAAGCGAATTTGCTAAGCAAGTACGAGGCAACAATGAGAAGGGAAAGGGCATTGGCTTATTCATACTCTCATCAGCAAAACTGGAAGAACAACTCTAAATCTGGAAACCCGATGTTCATGGATCCAAGCAACCCGACATGGGGTTGGAGCTGGTTAGAGAGATGGATGGCTGGTAGGCCACTAGAGAGTTCCGAGAAAGAACAAAGCAACAGCAACAATGACAATGCTGCCTCGGTCAAGGGCTCTATTAACCGCAACGAAGCTGCAAAATCTCTAACCCGCAATGGCTCAACTCAACCAAACACACCATCATCCGCAAGAGGGACCCCAAGAAACAAAAACAGTTTCTTCTCACCTCCAACTCCCTCAAGGCTAAACCAATCCTCGAGGAAATCCAATGACGACGACTCCAAAAGCACAATCTCGGTCCTGTCCGAGAGGAACCGCAGACACAGCATTGCTGGTTCATCAGTCAGAGACGATGAGAGCCTCGCTGGCTCACCAGCTCTCCCGAGCTACATGGTTCCAACTAAATCAGCTCGAGCCAGGCTCAAGCCCCAAAGCCCATTAGGTGGTACCACACAGGAAAACGAAGGGTTCACAGACAAGGCATCAGCTAAGAAACGGCTCTCGTATCCAACTTCGCCTGCATTGCCTAAACCACGGCGGTTCTCAGCTCCCCCTAAGGTGGAGAGTGGCGGCGTTACCGTGACCAACGGAGCAGGCAGCTGAGGTATTTTATTTAATATAATTATTTTCCCACTTATGAATGTGTCCGAGATTGTTGTCTCTTATGTGTTCCCTTCATTTCGTAATTCATTTGTGCAGTGTAAGCGCCAGTCATTTATTTTTTTACTATAATAAATTTTATAACCTTTTAAAATTCATGTTCTTTTGTTTCTTTGAATATTTAAGTTATTTTTATTAATGTTGGATGAATTGGAATATGATGATGTTATTTGTATTGTAATGCAGATCCTTTAAAGCTTAATTAATTTGTAATACCTTTT - >AT5G03040.1
ATCTGTCTTCTCCTCTCTCTCTCTTCTCCATTTGCAATTATGATAATGTGAAAGCAATTCGAAGAAGAAAAGTTATCTTCGCACCTCAGCAAAGATCCAATCGATTCGATTCTTAAGCTTTTTCGTCTTCTCCGATAAGGTCACTACTTAGAAGCCGCGTTGTGGTTTAGTTGACTCCTCCAGGTTTTATCTTCAAGCTTTTTCGTCTATCAGATCTGGTGTCACTGTCTTCTCATAGAGATGGGGAAAAAAGCTAAATGGTTTTCAAGTGTTAAGAAAGCATTCAGCCCAGATTCAAAGAAGTCGAAGCAAAAATTGGCTGAGGGACAAAATGGTGTTATCTCTAATCCTCCTGTTGTGGATAATGTTAGACAATCTTCTTCTTCTCCTCCTCCTGCTCTTGCTCCTCGTGAAGTGAGAGTAGCTGAAGTGATTGTTGAACGGAACAGGGATCTTTCACCTCCTTCTACAGCAGATGCTGTGAATGTTACAGCTACTGATGTTCCTGTAGTTCCATCTTCATCTGCTCCTGGTGTTGTTCGTCGCGCTACACCTACTCGATTTGCTGGAAAGTCAAACGAAGAAGCCGCTGCTATCTTGATCCAGACTATATTTAGAGGTTATTTGGCAAGGAGAGCGTTGCGGGCAATGAGGGGTTTGGTCAGACTTAAGTTATTGATGGAAGGATCTGTTGTTAAGCGGCAAGCTGCAAATACTCTAAAATGTATGCAGACTCTCTCTCGTGTACAGTCGCAGATCCGAGCTAGGAGAATCAGGATGTCAGAAGAGAATCAGGCTCGCCAGAAACAACTCCTTCAGAAACATGCTAAAGAGCTAGCTGGCTTGAAGAACGGGGATAACTGGAATGATAGCATTCAATCAAAGGAGAAAGTTGAAGCGAATTTGCTAAGCAAGTACGAGGCAACAATGAGAAGGGAAAGGGCATTGGCTTATTCATACTCTCATCAGCAAAACTGGAAGAACAACTCTAAATCTGGAAACCCGATGTTCATGGATCCAAGCAACCCGACATGGGGTTGGAGCTGGTTAGAGAGATGGATGGCTGGTAGGCCACTAGAGAGTTCCGAGAAAGAACAAAGCAACAGCAACAATGACAATGCTGCCTCGGTCAAGGGCTCTATTAACCGCAACGAAGCTGCAAAATCTCTAACCCGCAATGGCTCAACTCAACCAAACACACCATCATCCGCAAGAGGGACCCCAAGAAACAAAAACAGTTTCTTCTCACCTCCAACTCCCTCAAGGCTAAACCAATCCTCGAGGAAATCCAATGACGACGACTCCAAAAGCACAATCTCGGTCCTGTCCGAGAGGAACCGCAGACACAGCATTGCTGGTTCATCAGTCAGAGACGATGAGAGCCTCGCTGGCTCACCAGCTCTCCCGAGCTACATGGTTCCAACTAAATCAGCTCGAGCCAGGCTCAAGCCCCAAAGCCCATTAGGTGGTACCACACAGGAAAACGAAGGGTTCACAGACAAGGCATCAGCTAAGAAACGGCTCTCGTATCCAACTTCGCCTGCATTGCCTAAACCACGGCGGTTCTCAGCTCCCCCTAAGGTGGAGAGTGGCGGCGTTACCGTGACCAACGGAGCAGGCAGCTGAGGTATTTTATTTAATATAATTATTTTCCCACTTATGAATGTGTCCGAGATTGTTGTCTCTTATGTGTTCCCTTCATTTCGTAATTCATTTGTGCAGTGTAAGCGCCAGTCATTTATTTTTTTACTATAATAAATTTTATAACCTTTTAAAATTCATGTTCTTTTGTTTCTTTGAATATTTAAGTTATTTTTATTAATGTTGGATGAATTGGAATATGATGATGTTATTTGTATTGTAATGCAGATCCTTTAAAGCTTAATTAATTTGTAATACCTTTT
CDS Sequence
Protein Sequence