Information report for AT5G02870
Gene Details
|
|
Functional Descriptions
- PO:0000282 — trichome — tricoma (Spanish, exact), 毛茸、糸状体、毛 (Japanese, exact), seta (related), setae (related), capilli (narrow), capillus (narrow), cilia (narrow), cilium (narrow), glochid (narrow), glochidia (narrow), glochidium (narrow), hair (narrow), lepides (narrow), lepis (narrow), non-secretory trichome (narrow), scale (narrow), squama (narrow), squamae (narrow), squamella (narrow), squamellae (narrow), squamule (narrow), barb trichome (broad), bristle (broad)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Mass spectrometric approach for identifying putative plasma membrane proteins of Arabidopsis leaves associated with cold acclimation. DOI: 10.1046/j.1365-313x.2003.01864.x ; PMID: 14535880
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- Cell-specific protein profiling in Arabidopsis thaliana trichomes: identification of trichome-located proteins involved in sulfur metabolism and detoxification. DOI: 10.1016/j.phytochem.2004.03.026 ; PMID: 15276459
- Localization of organelle proteins by isotope tagging (LOPIT). DOI: 10.1074/mcp.T400009-MCP200 ; PMID: 15295017
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- Differential phosphorylation of ribosomal proteins in Arabidopsis thaliana plants during day and night. DOI: 10.1371/journal.pone.0029307 ; PMID: 22195043
- Proteome and metabolome profiling of cytokinin action in Arabidopsis identifying and up-regulation. DOI: 10.1093/jxb/ert227 ; PMID: 24064926
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Dosage Sensitivity of RPL9 and Concerted Evolution of Ribosomal Protein Genes in Plants. DOI: 10.3389/fpls.2015.01102 ; PMID: 26734020
- Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. DOI: 10.1038/s41477-019-0378-z ; PMID: 30833711
- Cytokinin-induced protein synthesis suppresses growth and osmotic stress tolerance. DOI: 10.1111/nph.16519 ; PMID: 32129886
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- Mass spectrometric approach for identifying putative plasma membrane proteins of Arabidopsis leaves associated with cold acclimation. DOI: 10.1046/j.1365-313x.2003.01864.x ; PMID: 14535880
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- Cell-specific protein profiling in Arabidopsis thaliana trichomes: identification of trichome-located proteins involved in sulfur metabolism and detoxification. DOI: 10.1016/j.phytochem.2004.03.026 ; PMID: 15276459
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
Gene Resources
- UniProt: F4KDU5
- EMBL: CP002688
- AlphaFoldDB: F4KDU5
- EnsemblPlants: AT5G02870.2
- Gramene: AT5G02870.2
- Orthologous matrix: DYLEFEN
- ExpressionAtlas: AT5G02870
Sequences
cDNA Sequence
- >AT5G02870.2
ACAGCCTCACTTCCAAACCCTTCGTTTACAGCAAAAAATCGAAAATGGTTGCCTCAGCCGCCGCACGACCTCTTGTCACCGTCCAAGGACTTGACGGTGACATGAGCACCGATCAATCCACCACCGTCACTTTACCAGACGTCATGACTGCTCCAGTTCGACCTGACATTGTCAACTTCGTCCACGCCCAAATCTCCAACAACAGCCGTCAGCCTTACGCAGTCTCCAAAAAGGCCGGTCACCAAACCTCCGCCGAGTCCTGGGGAACCGGAAGAGCCGTGTCACGTATCCCTCGTGTTCCTGGTGGTGGAACTCACCGTGCCGGTCAAGCAGCGTTCGGAAACATGTGTCGTGGTGGTCGTATGTTTGCTCCGACTAAGATCTGGAGACGCTGGCACCGTCGTGTCAATGTCAACATGAAGAGGCACGCGATTGTTTCTGCAATCGCTGCTACTGCTGTTCCAGCTCTTGTGATGGCTCGTGGTCACAAGATCGAGAATGTTCCTGAGATGCCTCTTGTTGTTAGCGACTCAGCTGAAGCTGTGGAGAAGACATCAGCTGCGATCAAGGTATTGAAGCAGATCGGTGCTTACGACGATGCGGAGAAAGCTAAGAACAGTATTGGAATTCGTCCTGGTAAAGGTAAAATGAGGAATCGTCGTTACATTTCTAGGAAAGGTCCTCTTGTTGTGTTTGGAACTGAAGGAGCCAAGATTGTGAAAGCTTTTAGGAATCTTCCTGGTGTTGAGCTTTGTCACGTTGAGAGGCTTAACTTGTTGAAATTAGCCCCTGGTGGTCACCTTGGTAGGTTTGTGATTTGGACTAAGTCTGCTTTTGAGAAGCTTGAATCTATCTATGGCTCGTTTGAGAAACCATCAGAGAAGAAGAAGGGTTACGTCTTGCCTCGTGCGAAGATGGTGAATGCTGATCTTGCTAGGATTATTAACTCCGATGAGGTACAGAGTGTGGTGAACCCGATTAAGGATGGTTCCAAGAGAGCGGTTCTGAAGAAGAATCCATTGAAGAACCTTAATGTGATGTTCAAGTTGAATCCTTATGCTAAGACCGCAAAGAGAATGTCTCTGTTGGCTGAAGCTTCAAGGGTTAAGGCTAAGAAGGAGAAGCTCGAGAAGAAGAGGAAAGTCGTCACTAAGGAGGCCCAAGCGATCAAAGCAGCAGGCAAGGCTTGGTATCAGACTATGATTTCAGACAGTGACTACACCGAGTTCGATAACTTCACCAAGTGGCTTGGCGCTAGTCAGTAATGATGCTCTCGTCATCGCAAAGTCTCTTATATCTAGGCAAAGATTTTGGTTTTCTGATTTATGTTCTTCGTTTGTATTGGATTTATCTGGGATTTTATGTTGTTGAGTTGGTAAGACGATTTTTAAGAACTATGATGGTGTTTTTCAAACTCTTTTCAATCTGTTTCCCTTAGTGCTCTTTACTCGCTATTCAAATTCCTCCATTTG - >AT5G02870.1
ACAGCCTCACTTCCAAACCCTTCGTTTACAGCAAAAAATCGAAAATGGTTGCCTCAGCCGCCGCACGACCTCTTGTCACCGTCCAAGGACTTGACGGTGACATGAGCACCGATCAATCCACCACCGTCACTTTACCAGACGTCATGACTGCTCCAGTTCGACCTGACATTGTCAACTTCGTCCACGCCCAAATCTCCAACAACAGCCGTCAGCCTTACGCAGTCTCCAAAAAGGCCGGTCACCAAACCTCCGCCGAGTCCTGGGGAACCGGAAGAGCCGTGTCACGTATCCCTCGTGTTCCTGGTGGTGGAACTCACCGTGCCGGTCAAGCAGCGTTCGGAAACATGTGTCGTGGTGGTCGTATGTTTGCTCCGACTAAGATCTGGAGACGCTGGCACCGTCGTGTCAATGTCAACATGAAGAGGCACGCGATTGTTTCTGCAATCGCTGCTACTGCTGTTCCAGCTCTTGTGATGGCTCGTGGTCACAAGATCGAGAATGTTCCTGAGATGCCTCTTGTTGTTAGCGACTCAGCTGAAGCTGTGGAGAAGACATCAGCTGCGATCAAGGTATTGAAGCAGATCGGTGCTTACGACGATGCGGAGAAAGCTAAGAACAGTATTGGAATTCGTCCTGGTAAAGGTAAAATGAGGAATCGTCGTTACATTTCTAGGAAAGGTCCTCTTGTTGTGTTTGGAACTGAAGGAGCCAAGATTGTGAAAGCTTTTAGGAATCTTCCTGGTGTTGAGCTTTGTCACGTTGAGAGGCTTAACTTGTTGAAATTAGCCCCTGGTGGTCACCTTGGTAGGTTTGTGATTTGGACTAAGTCTGCTTTTGAGAAGCTTGAATCTATCTATGGCTCGTTTGAGAAACCATCAGAGAAGAAGAAGGGTTACGTCTTGCCTCGTGCGAAGATGGTGAATGCTGATCTTGCTAGGATTATTAACTCCGATGAGGTACAGAGTGTGGTGAACCCGATTAAGGATGGTTCCAAGAGAGCGGTTCTGAAGAAGAATCCATTGAAGAACCTTAATGTGATGTTCAAGTTGAATCCTTATGCTAAGACCGCAAAGAGAATGTCTCTGTTGGCTGAAGCTTCAAGGGTTAAGGCTAAGAAGGAGAAGCTCGAGAAGAAGAGGAAAGTCGTCACTAAGGAGGCCCAAGCGATCAAAGCAGCAGGCAAGGCTTGGTATCAGACTATGATTTCAGACAGTGACTACACCGAGTTCGATAACTTCACCAAGTGGCTTGGCGCTAGTCAGTAATGATGCTCTCGTCATCGCAAAGTCTCTTATATCTAGGCAAAGATTTTGGTTTTCTGATTTATGTTCTTCGTTTGTATTGGATTTATCTGGGATTTTATGTTGTTGAGTTGGTAAGACGATTTTTAAGAACTATGATGGTGTTTTTCAAACTCTTTTCAATCTGTTTCCCTTAGTGCTCTTTACTCGCTATTCAAATTCCTCCATTTG
CDS Sequence
Protein Sequence