Information report for AT5G02560
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- A transcriptome-based characterization of habituation in plant tissue culture. DOI: 10.1104/pp.105.076059 ; PMID: 16489130
- Constitutive expression exposes functional redundancy between the Arabidopsis histone H2A gene HTA1 and other H2A gene family members. DOI: 10.1105/tpc.105.039719 ; PMID: 16751347
- Repression of flowering in Arabidopsis requires activation of FLOWERING LOCUS C expression by the histone variant H2A.Z. DOI: 10.1105/tpc.106.048447 ; PMID: 17220196
- The histone variant H2A.W defines heterochromatin and promotes chromatin condensation in Arabidopsis. DOI: 10.1016/j.cell.2014.06.006 ; PMID: 24995981
- A unified phylogeny-based nomenclature for histone variants. DOI: 10.1186/1756-8935-5-7 ; PMID: 22650316
Gene Resources
- UniProt: F4KCF4
- EMBL: CP002688
- AlphaFoldDB: F4KCF4
- EnsemblPlants: AT5G02560.2
- Gramene: AT5G02560.2
- Orthologous matrix: HNSETHE
- ExpressionAtlas: AT5G02560
Sequences
cDNA Sequence
- >AT5G02560.2
AGATCAAAATCAGAATCAGAATCAAATTTCTCGTCGTGTCGGAGTAAATCAAGCCATGGATTCCGGAACCAAAGTGAAGAAAGGAGCCGCTGGAAGAAGAAGTGGTGGAGGTCCTAAGAAGAAACCGGTTTCCCGTTCGGTTAAATCCGGTCTACAGTTTCCTGTCGGTAGGATCGGTCGGTATCTTAAGAAAGGTCGTTATTCGAAGCGTGTCGGAACCGGAGCTCCGGTCTATCTCGCCGCCGTCCTCGAGTATCTTGCTGCTGAGAATTCTTGTGGGTTTTGTTCTGTTGCTTCGTTGACCATCTATAGGTGTAGAATGTCTTCTTCTGATTTTAGGGTTCTCGAGCTTGCTGGTAACGCTGCAAGAGATAACAAAAAGAACCGTATTATACCACGCCATGTTCTATTAGCGGTGAGGAACGACGAGGAGCTAGGGACACTACTCAAAGGCGTAACCATTGCACACGGCGGTGTTTTACCAAACATAAACCCAATACTCCTCCCAAAGAAGTCTGAGAAAGCAGCTTCAACTACAAAAACACCCAAATCACCATCAAAGGCAACCAAATCCCCTAAGAAATCTTAGTACTTCTTTCTTCATTCCTCTGTATAACCTACTGTTTCTATCTCTCTGTACGTTTCTCTGTAAAGACAGAACAGAATATCTCTTTGTTGTTGTGAGAAAGCTTAGTTTCTCTGATCGTCGTTGTGAAATAAAAAATGCAACGTTTCATA - >AT5G02560.1
AGATCAAAATCAGAATCAGAATCAAATTTCTCGTCGTGTCGGAGTAAATCAAGCCATGGATTCCGGAACCAAAGTGAAGAAAGGAGCCGCTGGAAGAAGAAGTGGTGGAGGTCCTAAGAAGAAACCGGTTTCCCGTTCGGTTAAATCCGGTCTACAGTTTCCTGTCGGTAGGATCGGTCGGTATCTTAAGAAAGGTCGTTATTCGAAGCGTGTCGGAACCGGAGCTCCGGTCTATCTCGCCGCCGTCCTCGAGTATCTTGCTGCTGAGAATTCTTGTGGGTTTTGTTCTGTTGCTTCGTTGACCATCTATAGGTGTAGAATGTCTTCTTCTGATTTTAGGGTTCTCGAGCTTGCTGGTAACGCTGCAAGAGATAACAAAAAGAACCGTATTATACCACGCCATGTTCTATTAGCGGTGAGGAACGACGAGGAGCTAGGGACACTACTCAAAGGCGTAACCATTGCACACGGCGGTGTTTTACCAAACATAAACCCAATACTCCTCCCAAAGAAGTCTGAGAAAGCAGCTTCAACTACAAAAACACCCAAATCACCATCAAAGGCAACCAAATCCCCTAAGAAATCTTAGTACTTCTTTCTTCATTCCTCTGTATAACCTACTGTTTCTATCTCTCTGTACGTTTCTCTGTAAAGACAGAACAGAATATCTCTTTGTTGTTGTGAGAAAGCTTAGTTTCTCTGATCGTCGTTGTGAAATAAAAAATGCAACGTTTCATA
CDS Sequence
Protein Sequence