Gene Details:
- Gene ID: AT5G02280
- Gene Symbol: TRAPPC4
- Gene Name:
- Description: SNARE-like superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Holding it all together? Candidate proteins for the plant Golgi matrix. DOI: 10.1016/j.pbi.2005.09.014 ; PMID: 16194619
- Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development. DOI: 10.1105/tpc.106.047688 ; PMID: 17337630
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Tethering factors required for cytokinesis in Arabidopsis. DOI: 10.1104/pp.110.154286 ; PMID: 20713617
- AtTRAPPC11/ROG2: A Role for TRAPPs in Maintenance of the Plant Trans-Golgi Network/Early Endosome Organization and Function. DOI: 10.1105/tpc.19.00110 ; PMID: 31175171
- TRIPP Is a Plant-Specific Component of the Arabidopsis TRAPPII Membrane Trafficking Complex with Important Roles in Plant Development. DOI: 10.1105/tpc.20.00044 ; PMID: 32371545
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Sequences:
cDNA Sequence
- >AT5G02280.1
AATAAGATCTGTACTGTTGTTCTTCATCGTCTCGCTGATTTCTCGGATTTGGATCTTTGAAGATTATCGGGGGAAAAAAATGGCAGCGATTTACAGTCTTTACATAATTAACAAATCTGGTGGTTTGATATTCTACAAGGATTGTGGAACAAAGGGAAGAATGGATACGAATGATAGCTTGAGAGTAGCTAGTTTATGGCATTCAATGCACGCCATTTCTCAGCAGCTTTCACCTGTCAATGGCTGTTCTGGCATCGAGCTTCTCGAAGCCGACACTTTCGATCTCCATTGTTTCCAGTCTCTCCCAGGAACAAAGTTCTTTGTGGTTTGTGAACCTGGGACTCCTCACATGGAGAGCCTCCTTAGATACATTTATGAACTCTACACTGATTACGTCTTGAAGAATCCTTTCTATGAGATTGAAATGCCTATCCGTTGCGAGCTTTTCGACATCAACCTTACTCAAGCTGTACAGTCAGATCGTGTTGCTTTGTTAGGACGATGAACTAGAGATTGATTCTCTGCTAGGATCATCTCACTTCTTTGCCTCTTTTTTTTGTGGTTTTCTTATCCTGATAACATTTTGTATGTGAGATAACATGTGAACGTTGTAAGAGAACCTAAGTTTACAACTAGTAAGTTTCCTTCTCTCCCTTACATT
CDS Sequence
Protein Sequence