Information report for AT5G02270
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- The Arabidopsis thaliana ABC protein superfamily, a complete inventory. DOI: 10.1074/jbc.M103104200 ; PMID: 11346655
- Inventory and comparative analysis of rice and Arabidopsis ATP-binding cassette (ABC) systems. DOI: 10.1016/j.jmb.2004.07.093 ; PMID: 15381434
- Molecular phenotyping of the pal1 and pal2 mutants of Arabidopsis thaliana reveals far-reaching consequences on phenylpropanoid, amino acid, and carbohydrate metabolism. DOI: 10.1105/tpc.104.023705 ; PMID: 15377757
- DNA array analyses of Arabidopsis thaliana lacking a vacuolar Na+/H+ antiporter: impact of AtNHX1 on gene expression. DOI: 10.1111/j.1365-313X.2004.02253.x ; PMID: 15546358
- A UV-B-specific signaling component orchestrates plant UV protection. DOI: 10.1073/pnas.0507187102 ; PMID: 16330762
- Genome-wide analysis of ATP-binding cassette (ABC) proteins in a model legume plant, Lotus japonicus: comparison with Arabidopsis ABC protein family. DOI: 10.1093/dnares/dsl013 ; PMID: 17164256
- Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development. DOI: 10.1105/tpc.106.047688 ; PMID: 17337630
- Genome-wide gene expression analysis reveals a critical role for CRYPTOCHROME1 in the response of Arabidopsis to high irradiance. DOI: 10.1104/pp.107.098293 ; PMID: 17478635
- Altered profile of secondary metabolites in the root exudates of Arabidopsis ATP-binding cassette transporter mutants. DOI: 10.1104/pp.107.109587 ; PMID: 18065561
- Plant ABC proteins–a unified nomenclature and updated inventory. DOI: 10.1016/j.tplants.2008.02.001 ; PMID: 18299247
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Comprehensive flavonol profiling and transcriptome coexpression analysis leading to decoding gene-metabolite correlations in Arabidopsis. DOI: 10.1105/tpc.108.058040 ; PMID: 18757557
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Karrikins enhance light responses during germination and seedling development in Arabidopsis thaliana. DOI: 10.1073/pnas.0911635107 ; PMID: 20351290
- Non-intrinsic ATP-binding cassette proteins ABCI19, ABCI20 and ABCI21 modulate cytokinin response at the endoplasmic reticulum in Arabidopsis thaliana. DOI: 10.1007/s00299-019-02503-0 ; PMID: 32016506
Gene Resources
- UniProt: A0A5S9Y0N5
- EMBL: CACRSJ010000110, CACSHJ010000096
- AlphaFoldDB: A0A5S9Y0N5
- EnsemblPlants: AT5G02270.1
- Gramene: AT5G02270.1
- KEGG: ath:AT5G02270
- Orthologous matrix: MRTVEQW
- ExpressionAtlas: AT5G02270
- InterPro: IPR003439, IPR003593, IPR027417
- PANTHER: PTHR43158, PTHR43158:SF12
- SUPFAM: SSF52540
- PROSITE: PS50893
- Gene3D: 3.40.50.300
- OrthoDB: A0A5S9Y0N5
- SWISS-MODEL: A0A5S9Y0N5
Sequences
cDNA Sequence
- >AT5G02270.1
GCGTCGTTATTATATCGATGGTCTCTACTCGCGCCACGTCGCCTAATTAATTTAACGACGTCGTCTTTTAAAGAACTAGCGTCTCTTAAAGCGCCACGTGAGCTAATGTTTAAAAAACTTCACCAAAAATGGTGTCGTTTCAATAACTTTTCTTCACCAACTACCAAAAACGTCTGAAGAAGAAAAAAGTATAAGTAAAGCAGAGAGAAGAGCAAGGGAGAGGTACTAAAAATGGCGGTGACGGAGGAGGAGAAGAAGCGGAATTCAACGGTTGAGATCTCCGGATTACGTTTCACGTATCCTGGAATCGACGGTCATCCACCACCGGGATCGAAACCACTTATTGAAGATTTCTCAATCACGCTTAATTCCAGCGATCGGTGTCTCCTCGTCGGATCTAATGGCGCTGGGAAAACGACGATTCTGAAGATATTGGGAGGGAAACACATGGTGGAGCCGCATATGGTTAGGGTTCTGGGTCGCTCGGCGTTTCATGATACTGGATTGACCTCTTCTGGTGATCTCTGTTATCTCGGTGGCGAGTGGAGGCGTGATGTTGCATTTGCAGGATTTGAAGTTCCGATACAAATGGACATTTCGGCGGAGAAGATGATATTTGGAGTGGCTGGTATTGATCCTCAGAGAAGAGATGAGTTGATCAAGGTGTTGGATATCGACATCTCATGGAGACTGCACAAGGTATCCGATGGCCAAAGAAGACGTGTACAGATCTGTATGGGACTCCTGAAGCCATTCAAGGTTCTCCTTTTGGATGAAATAACTGTTGATCTTGACGTTCTCGCTAGAGCAGACCTTTTGAAGTTTCTGAGAAAGGAATGTGAAGAACGAGGAGCAACCATAATCTACGCTACTCATATATTCGATGGCTTAGAGGACTGGCCAACACACATTGTGTATGTAGCAAACGGAAAATTGCAGTTAGCATTGCCAATGGAGAAAGTGAAGGAGACAAGCAAGAAGTCATTGATGAGAACAGTTGAGAGTTGGCTGAGGAAAGAAAGAGATGAAGAGAGAAAGAGAAGGAAAGAGAGGAAAGCTAATGGGCTTCCAGAGTTTGAAACACGGACTGAAGAAAGCCGTGTGACTGGTGATCCAGCACGGATGCTGAACAATGGCTGGGCTGCCGGGAGACTTCACTCTACGGTTGCAGGTGGTGAGGATAATTTCGTCTTAAGCTCAAACAGAGTTCTAAGATAAATTAAGCAAGAGAGACGTTGGAGCAAAAGTGGAATAGTAATATTTTTACGTTATTTGTTTTTAACCACGAATAATATTTCTTTTTCTTTTTTTGAACTATTTGTTACTCTGAAATATGATTTTTTATAATTTATATTTTAGTTGATTTTTTTCACAAAAGTAAATTTTACATTGTTATGTTATTTTTCTGTTATTTTCTCAAATGCTTGGATCCTAAAAACGAGAAAATAC - >AT5G02270.2
GCGTCGTTATTATATCGATGGTCTCTACTCGCGCCACGTCGCCTAATTAATTTAACGACGTCGTCTTTTAAAGAACTAGCGTCTCTTAAAGCGCCACGTGAGCTAATGTTTAAAAAACTTCACCAAAAATGGTGTCGTTTCAATAACTTTTCTTCACCAACTACCAAAAACGTCTGAAGAAGAAAAAAGTATAAGTAAAGCAGAGAGAAGAGCAAGGGAGAGGTACTAAAAATGGCGGTGACGGAGGAGGAGAAGAAGCGGAATTCAACGGTTGAGATCTCCGGATTACGTTTCACGTATCCTGGAATCGACGGTCATCCACCACCGGGATCGAAACCACTTATTGAAGATTTCTCAATCACGCTTAATTCCAGCGATCGGTGTCTCCTCGTCGGATCTAATGGCGCTGGGAAAACGACGATTCTGAAGATATTGGGAGGGAAACACATGGTGGAGCCGCATATGGTTAGGGTTCTGGGTCGCTCGGCGTTTCATGATACTGGATTGACCTCTTCTGGTGATCTCTGTTATCTCGGTGGCGAGTGGAGGCGTGATGTTGCATTTGCAGGATTTGAAGTTCCGATACAAATGGACATTTCGGCGGAGAAGATGATATTTGGAGTGGCTGGTATTGATCCTCAGAGAAGAGATGAGTTGATCAAGGTGTTGGATATCGACATCTCATGGAGACTGCACAAGGTATCCGATGGCCAAAGAAGACGTGTACAGATCTGTATGGGACTCCTGAAGCCATTCAAGGTTCTCCTTTTGGATGAAATAACTGTTGATCTTGACGTTCTCGCTAGAGCAGACCTTTTGAAGTTTCTGAGAAAGGAATGTGAAGAACGAGGAGCAACCATAATCTACGCTACTCATATATTCGATGGCTTAGAGGACTGGCCAACACACATTGTGTATGTAGCAAACGGAAAATTGCAGTTAGCATTGCCAATGGAGAAAGTGAAGGAGACAAGCAAGAAGTCATTGATGAGAACAGTTGAGAGTTGGCTGAGGAAAGAAAGAGATGAAGAGAGAAAGAGAAGGAAAGAGAGGAAAGCTAATGGGCTTCCAGAGTTTGAAACACGGACTGAAGAAAGCCGTGTGACTGGTGATCCAGCACGGATGCTGAACAATGGCTGGGCTGCCGGGAGACTTCACTCTACGGTTGCAGGTGGTGAGGATAATTTCGTCTTAAGCTCAAACAGAGTTCTAAGATAAATTAAGCAAGAGAGACGTTGGAGCAAAAGTGGAATAGTAATATTTTTACGTTATTTGTTTTTAACCACGAATAATATTTCTTTTTCTTTTTTTGAACTATTTGTTACTCTGAAATATGATTTTTTATAATTTATATTTTAGTTGATTTTTTTCACAAAAGTAAATTTTACATTGTTATGTTATTTTTCTGTTATTTTCTCAAATGCTTGGATCCTAAAAACGAGAAAATAC
CDS Sequence
Protein Sequence