Information report for AT5G02260
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Expansins: ever-expanding numbers and functions. DOI: 10.1016/s1369-5266(00)00211-9 ; PMID: 11641069
- Plant expansins are a complex multigene family with an ancient evolutionary origin. DOI: 10.1104/pp.010658 ; PMID: 11891242
- Genomic evidence for COP1 as a repressor of light-regulated gene expression and development in Arabidopsis. DOI: 10.1105/tpc.004416 ; PMID: 12368493
- The xylem and phloem transcriptomes from secondary tissues of the Arabidopsis root-hypocotyl. DOI: 10.1104/pp.105.060202 ; PMID: 15923329
- Expansins are involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2006.02856.x ; PMID: 16942607
- Gibberellin mobilizes distinct DELLA-dependent transcriptomes to regulate seed germination and floral development in Arabidopsis. DOI: 10.1104/pp.106.082289 ; PMID: 16920880
- A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers. DOI: 10.1186/1471-2229-8-94 ; PMID: 18796151
- A Molecular Signal Integration Network Underpinning Arabidopsis Seed Germination. DOI: 10.1016/j.cub.2020.07.012 ; PMID: 32763174
- Expansins: ever-expanding numbers and functions. DOI: 10.1016/s1369-5266(00)00211-9 ; PMID: 11641069
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
Gene Resources
- UniProt: A0A178UHJ8
- EMBL: CACRSJ010000110, CACSHJ010000096, LUHQ01000005
- AlphaFoldDB: A0A178UHJ8
- EnsemblPlants: AT5G02260.1
- Gramene: AT5G02260.1
- KEGG: ath:AT5G02260
- Orthologous matrix: YTGGPWI
- ExpressionAtlas: AT5G02260
- InterPro: IPR002963, IPR007112, IPR007117
- PANTHER: PTHR31867
- SUPFAM: SSF49590, SSF50685
- PROSITE: PS50842, PS50843
- Gene3D: 2.40.40.10, 2.60.40.760
- OrthoDB: A0A178UHJ8
- SWISS-MODEL: A0A178UHJ8
- Conserved Domain Database: cd22274
Sequences
cDNA Sequence
- >AT5G02260.1
CTTAAATTAGAAAAATAATTAAAAAAAGGCGTAAAGTCATTTGAAGCCTCCATAAGTAGCCTTCCTAGCTTCCCCTCTCCCTCTCACATTCCTCTCTTCTCTCTCTCTTTTCCCAAAAACCAAAACCTTTTTTCCGTACCAAGGTCAACAAATGGCGGCGAAAGTAATTACATTTATGGCGGTTATGGTGGTTACTGCCTTTACGGCCAACGCCAAAATCCCCGGAGTTTACACCGGTGGTCCTTGGATCAATGCTCACGCCACCTTCTACGGTGAAGCTGACGCTTCCGGCACTATGGGTGGTGCGTGTGGGTACGGGAATTTGTATAGCCAAGGTTACGGAGTGAACACGGCGGCTTTAAGCACTGCCTTATTCAACAATGGTTTGAGTTGTGGCTCTTGCTTTGAGCTTAAGTGTATCAATGATCCAGGATGGTGTCTTCCTGGAAACCCATCAATTCTTATCACCGCCACTAATTTCTGCCCTCCTAACTTTAATCAAGCTAGCGACAATGGTGGTTGGTGTAATCCTCCTCGTGAGCACTTTGATCTCGCTATGCCTATGTTTCTTTCCATCGCTAAGTATAAGGCTGGTATCGTCCCCGTCTCTTACCGCAGGATCCCATGTAGGAAGAAGGGAGGAATCAGATTCACAATCAATGGATTCAAGTACTTCAACTTGGTGCTGGTCACTAACGTAGCCGGAGCTGGAGACGTCATTAAGGTGAGTGTGAAAGGATCCAACACACAATGGTTAGATCTGAGCCGGAACTGGGGACAAAACTGGCAATCCAACGCACTTCTTGTCGGCCAATCTCTTTCTTTCCGAGTCAAAACCTCTGATGGCCGAAGCTCCACCTCCAACAACATTGCTCCCAGTAACTGGCAATTTGGCCAGACCTACTCCGGCAAGAACTTCCGCGTCTGATTTCTAGAATATGAAAAAGAGTCGTGTGGCGGAAGATACTAAAGCTTTTTTTTATATCAAATATATATATTTACGTGTCTTTGATTTAGTTTACGATTTGGAATTGGGGTTTTACCATTTTTCCCTTATTTTCTCAGGGAAAGTATTGGGATTGCTTGGTTTGCAAGTTAGGGTTTACTTTAAAGATTAGGGCTATATTGTTTTTTTTGTTTTTTTTGGTGTGTTGTGTCTTGTTTGGTATGTAGTCTTGTAGAGAGGCTGAAGCGGCTGCAGAAAGAAAGGGTTGGGATAAAGATTCATGTAGCCCGCAGCTCTCTTTTACGTTATGATTGTATTAAAGTATATATATATCATGAAGAAATTAAACATGGTTTCTTCGATTTATATAAATAAATAATTGGATTTTTTGTTTCAAGACAAATAGCTCGCTCGG
CDS Sequence
Protein Sequence