Gene Details:

• Gene ID: AT5G02200
• Gene Symbol: FHL
• Gene Name: far-red-elongated hypocotyl1-like
• Description: far-red-elongated hypocotyl1-like protein;(source:Araport11)
• TAIR Accession: locus:2185188
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G02200.1     AT5G02200.2

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

Gene Ontology:

• GO:0045893  — involved in — positive regulation of DNA-templated transcription
• GO:0005515  — enables — protein binding
• GO:0051457  — acts upstream of or within — maintenance of protein location in nucleus
• GO:0031048  — involved in — regulatory ncRNA-mediated heterochromatin formation
• GO:0010218  — involved in — response to far red light
• GO:0005737  — is active in — cytoplasm
• GO:0005634  — located in — nucleus
• GO:0051457  — involved in — maintenance of protein location in nucleus
• GO:0016607  — located in — nuclear speck
• GO:0009637  — acts upstream of or within — response to blue light
• GO:0042803  — enables — protein homodimerization activity
• GO:0010218  — acts upstream of or within — response to far red light
• GO:0009416  — involved in — response to light stimulus
• GO:0005737  — located in — cytoplasm
• GO:0061608  — enables — nuclear import signal receptor activity
• GO:0016607  — is active in — nuclear speck

Function-related keywords:

• shoot axis apex ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  pollen

Literature:

• The phytochrome A specific signaling component PAT3 is a positive regulator of Arabidopsis photomorphogenesis.   DOI:  10.1093/pcp/pce177 ;  PMID:  11726703
• Arabidopsis fhl/fhy1 double mutant reveals a distinct cytoplasmic action of phytochrome A.   DOI:  10.1073/pnas.0703855104 ;  PMID:  17566111
• FHL is required for full phytochrome A signaling and shares overlapping functions with FHY1.   DOI:  10.1111/j.1365-313X.2005.02453.x ;  PMID:  16045472
• Discrete and essential roles of the multiple domains of Arabidopsis FHY3 in mediating phytochrome A signal transduction.   DOI:  10.1104/pp.108.120436 ;  PMID:  18715961
• Phytochrome A mediates rapid red light-induced phosphorylation of Arabidopsis FAR-RED ELONGATED HYPOCOTYL1 in a low fluence response.   DOI:  10.1105/tpc.108.061259 ;  PMID:  19208901
• The histidine kinase-related domain of Arabidopsis phytochrome a controls the spectral sensitivity and the subcellular distribution of the photoreceptor.   DOI:  10.1104/pp.109.135988 ;  PMID:  19403732
• FAR-RED ELONGATED HYPOCOTYL1 and FHY1-LIKE associate with the Arabidopsis transcription factors LAF1 and HFR1 to transmit phytochrome A signals for inhibition of hypocotyl elongation.   DOI:  10.1105/tpc.109.067215 ;  PMID:  19482971
• FHY1 mediates nuclear import of the light-activated phytochrome A photoreceptor.   DOI:  10.1371/journal.pgen.1000143 ;  PMID:  18670649
• Arabidopsis transcription factor ELONGATED HYPOCOTYL5 plays a role in the feedback regulation of phytochrome A signaling.   DOI:  10.1105/tpc.110.075788 ;  PMID:  21097709
• Photoconversion and nuclear trafficking cycles determine phytochrome A's response profile to far-red light.   DOI:  10.1016/j.cell.2011.07.023 ;  PMID:  21884939
• Phytochrome signaling mechanisms.   DOI:  10.1199/tab.0148 ;  PMID:  22303272
• Effects of missense mutation on structure and function of photoreceptor.   DOI:  10.4161/psb.19702 ;  PMID:  22516823
• A short amino-terminal part of Arabidopsis phytochrome A induces constitutive photomorphogenic response.   DOI:  10.1093/mp/sss035 ;  PMID:  22498774
• Phosphorylation of FAR-RED ELONGATED HYPOCOTYL1 is a key mechanism defining signaling dynamics of phytochrome A under red and far-red light in Arabidopsis.   DOI:  10.1105/tpc.112.097733 ;  PMID:  22582101
• Three transcription factors, HFR1, LAF1 and HY5, regulate largely independent signaling pathways downstream of phytochrome A.   DOI:  10.1093/pcp/pct042 ;  PMID:  23503597
• Arabidopsis phytochrome A nuclear translocation is mediated by a far-red elongated hypocotyl 1-importin complex.   DOI:  10.1111/tpj.14107 ;  PMID:  30256472
• Hinge region of Arabidopsis phyA plays an important role in regulating phyA function.   DOI:  10.1073/pnas.1813162115 ;  PMID:  30478060
• Arabidopsis FHY1 and FHY1-LIKE Are Not Required for Phytochrome A Signal Transduction in the Nucleus.   DOI:  10.1016/j.xplc.2019.100007 ;  PMID:  33404546
• Arabidopsis Circadian Clock Repress Phytochrome a Signaling.   DOI:  10.3389/fpls.2022.809563 ;  PMID:  35645991
• FHY1 and FHL act together to mediate nuclear accumulation of the phytochrome A photoreceptor.   DOI:  10.1093/pcp/pcj087 ;  PMID:  16861711
• The serine-rich N-terminal region of Arabidopsis phytochrome A is required for protein stability.   DOI:  10.1007/s11103-006-9115-x ;  PMID:  17160561
• FHL is required for full phytochrome A signaling and shares overlapping functions with FHY1.   DOI:  10.1111/j.1365-313X.2005.02453.x ;  PMID:  16045472
• Transposase-derived transcription factors regulate light signaling in Arabidopsis.   DOI:  10.1126/science.1146281 ;  PMID:  18033885

Sequences: