Gene Details:
- Gene ID: AT5G02190
- Gene Symbol: ASP38, ATASP38, EMB24, PCS1
- Gene Name: , ARABIDOPSIS THALIANA ASPARTIC PROTEASE 38, EMBRYO DEFECTIVE 24, PROMOTION OF CELL SURVIVAL 1
- Description: Eukaryotic aspartyl protease family protein;(source:Araport11)
- TAIR Accession: locus:2185173
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009066 — anther — antera (Spanish, exact), 半葯,花粉のう (Japanese, exact), Poaceae anther (narrow), Zea anther (narrow)
- PO:0020003 — plant ovule — óvulo vegetal (Spanish, exact), 胚珠 (Japanese, exact), Poaceae ovule (narrow), Zea ovule (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Gene Ontology:
- GO:0005783 — located in — endoplasmic reticulum
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0008233 — enables — peptidase activity
- GO:0004190 — enables — aspartic-type endopeptidase activity
- GO:0012501 — acts upstream of or within — programmed cell death
- GO:0005576 — located in — extracellular region
Function-related keywords:
- anther , plant ovule , pollen , shoot axis apex , plant embryo , stamen , sepal , flower , inflorescence flower pedicel , collective leaf structure , pollen
Literature:
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- The S8 serine, C1A cysteine and A1 aspartic protease families in Arabidopsis. DOI: 10.1016/j.phytochem.2003.09.005 ; PMID: 14697270
- Integrating the genetic and physical maps of Arabidopsis thaliana: identification of mapped alleles of cloned essential (EMB) genes. DOI: 10.1371/journal.pone.0007386 ; PMID: 19812694
- In vitro morphogenesis of arrested embryos from lethal mutants of Arabidopsis thaliana. DOI: 10.1007/BF00261231 ; PMID: 24232790
- Embryo-lethal mutants of Arabidopsis thaliana: analysis of mutants with a wide range of lethal phases. DOI: 10.1007/BF00251102 ; PMID: 24254011
- An eukaryotic translation initiation factor, AteIF5A-2, affects cadmium accumulation and sensitivity in Arabidopsis. DOI: 10.1111/jipb.12329 ; PMID: 25559189
- Dissecting the components controlling root-to-shoot arsenic translocation in Arabidopsis thaliana. DOI: 10.1111/nph.14761 ; PMID: 28857170
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Transcription factor ANAC004 enhances Cd tolerance in Arabidopsis thaliana by regulating cell wall fixation, translocation and vacuolar detoxification of Cd, ABA accumulation and antioxidant capacity. DOI: 10.1016/j.jhazmat.2022.129121 ; PMID: 35580499
Sequences:
cDNA Sequence
- >AT5G02190.1
AAAACAGAGATATTTTTCCAGCTGAAAAGAACAAACATCTCTCATTGATGTTCAGTGAACTTGCACCAAACTTCACTTCTTCTATACTTCTTCATAGCCACAAACTCAGTTCTTTGCAAGAAACACAAACTTAAGTATTCAAAATATCGTCATCATGTTCTCAAGATTCCATGCTCTGTTTCTTCTCCTTGTTCTTTCAGTAAGAACATATAAATGTGTATCTTCATCTTCTTCTTCTTCTTCTTCTTTCTCATTCTCTTCATTTTCTTCTTCGTCTTCTTCTCAAACTCTTGTCTTGCCTCTAAAGACCCGAATAACCCCAACGGATCATCGACCCACCGACAAACTTCATTTCCACCACAACGTCACTCTCACCGTTACTCTCACCGTCGGTACTCCTCCTCAAAACATCTCCATGGTCATTGACACTGGCAGTGAACTCTCCTGGCTTCGTTGCAACCGTTCCTCAAACCCAAACCCGGTTAACAATTTTGACCCGACCCGTTCCTCCTCTTATTCCCCAATCCCCTGTTCCTCACCCACTTGTCGTACCCGGACCCGAGACTTCCTCATACCCGCTTCTTGCGATTCAGACAAACTCTGCCACGCAACTCTATCCTACGCCGACGCTTCCTCCTCCGAAGGTAACCTCGCCGCCGAGATTTTCCACTTCGGAAACTCCACCAACGACTCCAATCTCATTTTCGGGTGTATGGGTTCCGTATCCGGATCCGACCCGGAAGAAGATACCAAAACAACTGGGTTATTGGGTATGAACCGTGGTTCCCTCTCTTTTATCTCTCAAATGGGTTTCCCCAAATTCTCTTATTGCATCTCCGGCACCGACGACTTCCCGGGGTTTCTTCTCCTCGGCGACTCTAACTTCACGTGGTTAACGCCGTTAAATTACACGCCGTTAATTCGTATCTCTACGCCGTTACCTTACTTCGACCGTGTAGCTTACACCGTCCAGCTCACGGGTATTAAAGTTAACGGTAAGCTTTTACCCATCCCTAAATCGGTTCTCGTACCGGATCATACCGGTGCTGGTCAAACCATGGTTGATTCCGGTACTCAGTTTACTTTCCTGCTTGGACCGGTTTACACCGCACTTCGATCCCATTTCTTAAACCGGACAAACGGAATCTTAACGGTTTACGAAGACCCAGATTTTGTTTTCCAAGGAACCATGGATTTGTGTTATCGGATTTCACCGGTTCGTATACGGTCCGGAATTCTCCACCGTTTACCAACAGTTTCTCTGGTTTTCGAAGGAGCCGAGATAGCGGTTTCGGGTCAGCCGCTATTGTACCGAGTCCCGCATCTCACGGTTGGAAACGATTCGGTTTATTGTTTCACATTTGGAAACTCCGACCTTATGGGAATGGAGGCTTACGTGATTGGACATCATCATCAGCAGAACATGTGGATCGAATTTGATCTACAAAGATCAAGAATCGGTTTAGCTCCGGTAGAATGTGATGTATCGGGTCAGAGACTCGGAATCGGATCGTAAACCATAGATAACCAGTGTGTAATTATAGTTTTTTGCCTACGTAGAAATGGTTTCTCTAGTAGAAAGGTATGCACGTGACTACAATGAGATTTGTGTTACGGACACGAGCGGGTGTGTAATAACTTCGAGTTTGGTAGTAGTTAGTTAGTTGTCTCTGTTTGCTTTTGACATGGTCTTTTCTTTGCGTAATTAATTTTTAGCTGAGAGTTATATCACAAAATCTTTAATCGTCATCAGTTTTGGACTTTTGAATCGCACTATGTTTTTTTTCGTTATTCAAAATAAAGTTACAAAAGTTAATGTTAAAAATCGCGAAAAAACAAACTTGTTTTGAC
CDS Sequence
Protein Sequence