Gene Details:
- Gene ID: AT5G02160
- Gene Symbol: FIP
- Gene Name: FtsH5 Interacting Protein
- Description: transmembrane protein;(source:Araport11)
- TAIR Accession: locus:2185128
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0005515 — enables — protein binding
- GO:0009535 — located in — chloroplast thylakoid membrane
- GO:0032055 — acts upstream of or within — negative regulation of translation in response to stress
- GO:0009535 — is active in — chloroplast thylakoid membrane
- GO:0009507 — located in — chloroplast
- GO:0005886 — located in — plasma membrane
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Global identification of target genes regulated by APETALA3 and PISTILLATA floral homeotic gene action. DOI: 10.1105/tpc.006353 ; PMID: 12509532
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- Interaction of the tobacco mosaic virus replicase protein with the Aux/IAA protein PAP1/IAA26 is associated with disease development. DOI: 10.1128/JVI.79.4.2549-2558.2005 ; PMID: 15681455
- A putative hydroxysteroid dehydrogenase involved in regulating plant growth and development. DOI: 10.1104/pp.107.100560 ; PMID: 17616511
- Redox state of plastoquinone pool regulates expression of Arabidopsis thaliana genes in response to elevated irradiance. DOI: 20081565 ; PMID: 18231654
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- The Zinc-Finger Thylakoid-Membrane Protein FIP Is Involved With Abiotic Stress Response in Arabidopsis thaliana. DOI: 10.3389/fpls.2018.00504 ; PMID: 29720990
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- The Zinc-Finger Thylakoid-Membrane Protein FIP Is Involved With Abiotic Stress Response in Arabidopsis thaliana. DOI: 10.3389/fpls.2018.00504 ; PMID: 29720990
Sequences:
cDNA Sequence
- >AT5G02160.1
AAAAGAAAACTGAAGAACCCCAAAAATCCCAAGTGAAAACGTTATCCACTTCGAGAGAGTGACACGTCACGAAGCAAATCCAAATTCAAAACCTTTCCATAAAAATCAAATCACTTCTTCTTATTACTTCCCCCAAATCGAAATCAGTCACTTAAAACCCTAAATTATGACGATCGCACCGGCATTGCAGACGACGTTCGTGTCATCAACCAACTTCCTGAAACATTCTTCTTCGTGGGGATCACCATCACCGAACAATGTGATTCTTCCCAAAAACAAGAGATCTTCTTCCTCCGTAGTTGTCGCCGCCGTCGGTGATGTCTCTTCTGACGGAACAATCTACTTAATCGGCGGAGCCATCGCCGTTGCACTCGTCGGAACTGCATTCCCGATCCTCTTCAAACGCAAAGACACGTGTCCGGAATGTGACGGAGCAGGATTTGTGAGGAAAGGAGGAGTGACTCTGAGAGCCAACGCCGCACGGAAGGATCTTCCTCAGATCGTTTGTGCTAACTGCAATGGACTCGGAAAGCTTAACCAGATTGATAAATCATAAGTCTTCTTCATATATATGTAAAAAGCTCCATTTCTCATTCCTCTTCTTCTCTACAATATACCTCTGCAAAAGTAGATAGCTTGGAATGATCAATGGTTGCTTGGAGATGGGTGGATATATATATATATATATATATATACAATTGCTTTTTTATGTGTAAGTTTCTTTGCTTTCTTGTTCTGTAAGAAATTGTCTGAGTATTATTGTAAGTTTTTAAGCAGTTATAGACGAAGGTGCTCAGCTACCAAAATAAAACGAACAAAAAATAAATTTAACTGCTGCATAAGTAATTAGAGATGAACATTTAATGGCCAATTAATGACCCAACTGTCATTGGCTTCTTACATCACATGCATATCAACTAATCTTCATTACGTGTCTATTTCTGTGTTTTATAAATAACCTCGCCAGAAACGTTTTTATATTTTTTCAAGCAA
CDS Sequence
Protein Sequence