Information report for AT5G02030
Gene Details
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Functional Descriptions
- PO:0008016 — vegetative shoot apical meristem — meristema vegetativo apical del epiblasto (epiblastema) (Spanish, exact), 栄養シュート頂端分裂組織 (Japanese, exact), vegetative meristem (related)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0025272 — plant ovary replum — false ovary septum (exact), placental septum (exact), replo (replum) del ovario (Spanish, exact), 子房隔膜 (Japanese, exact), ovary dissepiment (broad)
Functional Keywords
- vegetative shoot apical meristem , shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , inflorescence meristem , plant ovary replum
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Phyllotactic pattern and stem cell fate are determined by the Arabidopsis homeobox gene BELLRINGER. DOI: 10.1242/dev.00620 ; PMID: 12874117
- The interaction of two homeobox genes, BREVIPEDICELLUS and PENNYWISE, regulates internode patterning in the Arabidopsis inflorescence. DOI: 10.1105/tpc.012856 ; PMID: 12897247
- VAAMANA–a BEL1-like homeodomain protein, interacts with KNOX proteins BP and STM and regulates inflorescence stem growth in Arabidopsis. DOI: 10.1016/j.gene.2003.12.033 ; PMID: 15019989
- Competence to respond to floral inductive signals requires the homeobox genes PENNYWISE and POUND-FOOLISH. DOI: 10.1016/j.cub.2004.04.032 ; PMID: 15120075
- Induction of a homeodomain-leucine zipper gene by auxin is inhibited by cytokinin in Arabidopsis roots. DOI: 10.1016/j.bbrc.2004.11.014 ; PMID: 15567172
- A central role of Arabidopsis thaliana ovate family proteins in networking and subcellular localization of 3-aa loop extension homeodomain proteins. DOI: 10.1073/pnas.0501181102 ; PMID: 15781858
- A genetic framework for fruit patterning in Arabidopsis thaliana. DOI: 10.1242/dev.02062 ; PMID: 16192305
- Nuclear import of the transcription factor SHOOT MERISTEMLESS depends on heterodimerization with BLH proteins expressed in discrete sub-domains of the shoot apical meristem of Arabidopsis thaliana. DOI: 10.1093/nar/gkl016 ; PMID: 16513846
- Arabidopsis inflorescence architecture requires the activities of KNOX-BELL homeodomain heterodimers. DOI: 10.1007/s00425-006-0298-9 ; PMID: 16741748
- Common regulatory networks in leaf and fruit patterning revealed by mutations in the Arabidopsis ASYMMETRIC LEAVES1 gene. DOI: 10.1242/dev.02864 ; PMID: 17592013
- The Arabidopsis BEL1-LIKE HOMEODOMAIN proteins SAW1 and SAW2 act redundantly to regulate KNOX expression spatially in leaf margins. DOI: 10.1105/tpc.106.048769 ; PMID: 17873098
- Regulatory networks that function to specify flower meristems require the function of homeobox genes PENNYWISE and POUND-FOOLISH in Arabidopsis. DOI: 10.1111/j.1365-313X.2008.03458.x ; PMID: 18298668
- Interaction of KNAT6 and KNAT2 with BREVIPEDICELLUS and PENNYWISE in Arabidopsis inflorescences. DOI: 10.1105/tpc.108.058230 ; PMID: 18390591
- A novel role of BELL1-like homeobox genes, PENNYWISE and POUND-FOOLISH, in floral patterning. DOI: 10.1007/s00425-008-0867-1 ; PMID: 19082619
- Shoot apical meristem function in Arabidopsis requires the combined activities of three BEL1-like homeodomain proteins. DOI: 10.1111/j.1365-313X.2009.03809.x ; PMID: 19175771
- gorgon, a novel missense mutation in the SHOOT MERISTEMLESS gene, impairs shoot meristem homeostasis in Arabidopsis. DOI: 10.1093/pcp/pcq028 ; PMID: 20208065
- Specification of reproductive meristems requires the combined function of SHOOT MERISTEMLESS and floral integrators FLOWERING LOCUS T and FD during Arabidopsis inflorescence development. DOI: 10.1093/jxb/erq296 ; PMID: 20937733
- The role of PENNYWISE and POUND-FOOLISH in the maintenance of the shoot apical meristem in Arabidopsis. DOI: 10.1104/pp.110.171462 ; PMID: 21505100
- Regulation of the SQUAMOSA PROMOTER-BINDING PROTEIN-LIKE genes/microRNA156 module by the homeodomain proteins PENNYWISE and POUND-FOOLISH in Arabidopsis. DOI: 10.1093/mp/ssr041 ; PMID: 21653282
- Regulation of shoot meristem integrity during Arabidopsis vegetative development. DOI: 10.4161/psb.6.8.16462 ; PMID: 21822063
- Antagonistic interaction of BLADE-ON-PETIOLE1 and 2 with BREVIPEDICELLUS and PENNYWISE regulates Arabidopsis inflorescence architecture. DOI: 10.1104/pp.111.188573 ; PMID: 22114095
- BLADE-ON-PETIOLE1 and 2 regulate Arabidopsis inflorescence architecture in conjunction with homeobox genes KNAT6 and ATH1. DOI: 10.4161/psb.20599 ; PMID: 22751300
- Evidence that an evolutionary transition from dehiscent to indehiscent fruits in Lepidium (Brassicaceae) was caused by a change in the control of valve margin identity genes. DOI: 10.1111/tpj.12079 ; PMID: 23173897
- A role for BELLRINGER in cell wall development is supported by loss-of-function phenotypes. DOI: 10.1186/1471-2229-12-212 ; PMID: 23148846
- Antagonistic gene activities determine the formation of pattern elements along the mediolateral axis of the Arabidopsis fruit. DOI: 10.1371/journal.pgen.1003020 ; PMID: 23133401
- The OitaAG and OitaSTK genes of the orchid Orchis italica: a comparative analysis and D-class MADS-box genes. DOI: 10.1007/s11033-012-2426-x ; PMID: 23277396
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- The NTT transcription factor promotes replum development in Arabidopsis fruits. DOI: 10.1111/tpj.12617 ; PMID: 25039392
- Evolution of fruit development genes in flowering plants. DOI: 10.3389/fpls.2014.00300 ; PMID: 25018763
- Floral Induction in Arabidopsis by FLOWERING LOCUS T Requires Direct Repression of BLADE-ON-PETIOLE Genes by the Homeodomain Protein PENNYWISE. DOI: 10.1104/pp.15.00960 ; PMID: 26417007
- Repression of Lateral Organ Boundary Genes by PENNYWISE and POUND-FOOLISH Is Essential for Meristem Maintenance and Flowering in Arabidopsis. DOI: 10.1104/pp.15.00915 ; PMID: 26417006
- Redundant CArG Box Cis-motif Activity Mediates SHATTERPROOF2 Transcriptional Regulation during Arabidopsis thaliana Gynoecium Development. DOI: 10.3389/fpls.2017.01712 ; PMID: 29085379
- A molecular framework controlling style morphology in Brassicaceae. DOI: 10.1242/dev.158105 ; PMID: 29440299
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Shoot apical meristem function in Arabidopsis requires the combined activities of three BEL1-like homeodomain proteins. DOI: 10.1111/j.1365-313X.2009.03809.x ; PMID: 19175771
Gene Resources
- UniProt: A0A178U6G6
- EMBL: LUHQ01000005
- AlphaFoldDB: A0A178U6G6
Sequences
cDNA Sequence
- >AT5G02030.1
TTAGGTTTTCAAAATATGTCATATAAAGAAAAATTTGATATACATATTGATCGTGCTTCAAAAAGACACCAAAAGAGCTTCTCTCTCTCTTAACCTCTCGTTTCGCCATTATCTCTTACACTGTTACTCTCTCTCTCTCTTCTTCTTCTTCTTCTTCTTCTGCATCTCATCGACATCATCCTTTCCCATGGCTGATGCATACGAGCCTTATCATGTTCTTCAACAAAGCCGGCGAGACAAACTTCGTATTCCATCTCTCGATTCCCACTTCCACTTTCACCCTCCTCCTCCTCCTTCCTCCGGCGGCGGAGGTGGCGTCTTTCCTCTCGCTGATTCCGATTTCCTCGCAGCCGGTGGCTTTCACTCCAACAACAACAACAACCACATATCTAACCCTAGCTACAGTAATTTCATGGGATTTCTCGGTGGCCCTTCTTCTTCTTCATCCACCGCAGTCGCCGTCGCCGGAGATCATTCCTTTAACGCCGGACTTTCTTCCGGAGACGTTCTTGTCTTCAAACCCGAGCCTCTATCTCTATCTTTGTCCTCTCACCCTAGACTCGCTTACGATCTAGTCGTTCCCGGTGTTGTTAACTCCGGATTCTGTAGATCTGCCGGTGAAGCCAACGCCGCCGCCGTCACCATCGCGTCTAGAAGCTCTGGTCCTCTCGGACCTTTCACGGGCTACGCGTCGATTCTTAAAGGATCAAGGTTCTTGAAACCAGCACAGATGCTTCTTGATGAGTTTTGTAATGTGGGTCGTGGGATTTACACCGACAAAGTCATCGACGACGATGATTCTTCTCTGCTTTTTGATCCGACGGTTGAGAATCTCTGCGGTGTTTCTGATGGCGGCGGAGGAGATAATGGAAAGAAAAAATCAAAACTCATCTCCATGCTCGACGAGGTTTACAAGAGGTATAAGCAATACTATGAGCAGCTACAAGCTGTGATGGGATCATTCGAATGCGTTGCAGGTCTCGGGCACGCTGCTCCGTACGCTAACTTAGCCTTGAAAGCATTGTCTAAGCATTTCAAGTGTTTGAAGAATGCTATAACGGACCAGCTTCAATTCAGCCACAACAACAAGATCCAACAACAACAACAATGTGGTCATCCGATGAACTCTGAGAATAAGACTGATTCTTTAAGATTTGGAGGAAGTGATAGTTCTAGAGGCTTATGTTCTGCTGGTCAAAGACATGGATTTCCTGATCATCATGCTCCTGTTTGGAGACCGCACCGTGGCCTACCCGAACGTGCTGTTACTGTTCTAAGGGCTTGGCTCTTCGATCATTTCTTGCATCCTTATCCAACAGATACAGACAAACTCATGCTGGCTAAGCAGACAGGTCTCTCCAGAAATCAGGTATCGAATTGGTTCATAAACGCAAGAGTTAGGGTTTGGAAGCCGATGGTGGAAGAGATTCACATGCTGGAGACTCGACAATCTCAGAGATCTTCTTCTTCCTCTTGGAGAGACGAACGTACTAGCACCACCGTCTTCCCTGACAACAGCAACAACAACCCATCTTCGTCCTCGGCACAGCAAAGACCTAACAACTCATCTCCGCCTAGACGGGCACGAAACGACGACGTTCATGGCACAAACAACAACAACAGCTATGTAAACAGTGGGAGCGGCGGCGGTAGTGCGGTTGGTTTCTCGTATGGAATTGGGTCGTCGAATGTGCCGGTGATGAATAGCAGCACAAACGGAGGAGTGTCTTTGACGTTAGGGCTTCATCATCAGATTGGGTTACCGGAGCCTTTTCCGATGACAACTGCTCAGAGGTTTGGGCTTGATGGTGGTAGTGGCGATGGTGGTGGTGGGTATGAAGGGCAAAATCGTCAGTTTGGGAGAGATTTTATTGGTGGTAGTAATCATCAGTTTCTACATGATTTTGTAGGTTGAGATTATTTGTGTGGAAAGGAAAAAATATGTTTGACGTTTGGGTATGTATAAGAAGATATGGGGGAATTGAAATGCATATGATGTGTATATTAGAATGTTTCTTCTTCTTTTTTTGTTGTTTGCTTACTTTCACAAATGTTATCTTTTTAAGAAATGAAATTGGATTCAATAACCAATGTTAAAAACATGGGTTAGACTTTAGAGTTGTCTATGTCTTGGTGAAATATAAAAGGCATCTATCATTGTTTTAATA
CDS Sequence
Protein Sequence