Information report for AT5G01880
Gene Details
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Functional Descriptions
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Gene and enhancer trap transposable elements reveal oxygen deprivation-regulated genes and their complex patterns of expression in Arabidopsis. DOI: 10.1093/aob/mcf119 ; PMID: 12509334
- Transcriptome profiling of the response of Arabidopsis suspension culture cells to Suc starvation. DOI: 10.1104/pp.104.044362 ; PMID: 15310832
- Genetic interactions of a putative Arabidopsis thaliana ubiquitin-ligase with components of the Saccharomyces cerevisiae ubiquitination machinery. DOI: 10.1007/s00294-006-0093-y ; PMID: 16897085
- The ENHANCER OF SHOOT REGENERATION 2 gene in Arabidopsis regulates CUP-SHAPED COTYLEDON 1 at the transcriptional level and controls cotyledon development. DOI: 10.1093/pcp/pcl023 ; PMID: 17056621
- Arabidopsis ESK1 encodes a novel regulator of freezing tolerance. DOI: 10.1111/j.1365-313X.2006.02994.x ; PMID: 17316173
- Genome-wide analysis of Arabidopsis responsive transcriptome to nitrogen limitation and its regulation by the ubiquitin ligase gene NLA. DOI: 10.1007/s11103-007-9241-0 ; PMID: 17885809
- A RING-type E3 ligase controls anther dehiscence by activating the jasmonate biosynthetic pathway gene DEFECTIVE IN ANTHER DEHISCENCE1 in Arabidopsis. DOI: 10.1111/tpj.12122 ; PMID: 23347376
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
- OAF is a DAF-like gene that controls ovule development in plants. DOI: 10.1038/s42003-023-04864-5 ; PMID: 37156904
Gene Resources
- UniProt: Q0WP64
- EMBL: AK229217
- AlphaFoldDB: Q0WP64
- EnsemblPlants: AT5G01880.1
- Gramene: AT5G01880.1
- KEGG: ath:AT5G01880
- Orthologous matrix: RILPECC
- ExpressionAtlas: AT5G01880
Sequences
cDNA Sequence
- >AT5G01880.1
CAGAGACAATCAAAGAGACAAAAGCAGAGTTTAACTTAAAGAGTCCTGTCCTCCTCATCATCACGTCTCTCCCGAACACAAATTCAAAAGAAGACACAAATCGACGCCGGAGACTCATCGGATGCATCGACTGCTACTGGAATCCCACGGCGGCGGGAACGAGACGAGCGGAAGCGGCGGGGGAGATGGGTACACGAGGGACATGAACTTCGACGCAAACATGGTGATCATACTTGCGGCTCTTCTCTGCGCGCTGATACTAGCGCTTGGGCTGAATTCGATTCTCCGGTGCGCGATGCGATGCGGTTTCGGGTTATCATCCTCTGCGGCGGCGGGGACGGTGGCCGACAGAGCTGGATTAAAGAAGAGAGAACTGAAGAAGTTTCCAGTAGCTGAGTACGGGTCGGGGGAAGTGAAGATAGCGGCGACGGAGTGCGCAATCTGTCTGGGGGAATTCGCGGACGGCGAGAGAGTGCGAGTACTGCCGCCGTGTAATCACAGTTTCCACATGTCATGCATCGACACGTGGCTTGTCTCTCACTCTTCATGTCCCAATTGTCGGCATTCACTCATCGAGGTCCACGTGGCGGGGTCTGAGTGATTTAATTATCGTCGCGAGGGTTAGGTTGGCAGTAGTAGTAATCATAATTAGAGTTTAATGAGTTTATCATTATCGTCATAATTAAATTAATAATATGGGTAGATAGATAGATTATTTTCTTTAGTCTTCAGTTGTACTTGTAGTAATCAGAGATTTATTCAGTGCGTATGTTTTAGCAGCATTTATTTATGTAGAACACAACAACATCAGGATTGAGGCCGAATATAATTGGGCCTAATTTCAATTTATGTTAGTGGAAAAGCCCATCTTGGTTTTTGTTTTGCTTAGGTTATGTATGACGCTGCCCTAATTGACAAGTGAGAGTGAATGAGTGATGAGTGATGAGTGAAGAAGAAGAAGAAGAGCAGAGGAGGAGGTTGGGAGTGGGGGTGGTGTGGAAGCTTAAAGTATGTGTGAGAGCCAAAGGTTTCAGTTTGAAGCTCAATATACGGAACAAGCTCTCGCTTCATCGATGGTCAATCCTCTTAAGATTCCGAAAGCATCATCATCATCTCAAATCCAAACCGTCCGATTGGGTCAGATTCCGACGGAGTCTTTTTGCTCTCTTCCGTGGACGAAAACAGAGGGAAGTGGATACGAAGAAGAAACTCATCAAATTGGTTAGGAATCGAGCGGTGGTAGTGGCAAAGAAAGCAAAAGGCGTTGGTGTTGTGGTTACTCTCATCATCGTCGTCATCAATTTTCTAGTCCCATGGATCAACAAGCTGAGCAGCGAATTAGATTGTTATGAATTGTT
CDS Sequence
Protein Sequence