Gene Details:

• Gene ID: AT5G01675
• Gene Symbol: COOLAIR
• Gene Name:
• Description: Natural antisense transcript overlaps with AT5G10140 (FLC);(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G01675.5     AT5G01675.3     AT5G01675.2     AT5G01675.1     AT5G01675.4     AT5G01675.6

Literature:

• Vernalization-mediated epigenetic silencing by a long intronic noncoding RNA.   DOI:  10.1126/science.1197349 ;  PMID:  21127216
• Functional consequences of splicing of the antisense transcript COOLAIR on FLC transcription.   DOI:  10.1016/j.molcel.2014.03.026 ;  PMID:  24725596
• Modular function of long noncoding RNA, COLDAIR, in the vernalization response.   DOI:  10.1371/journal.pgen.1006939 ;  PMID:  28759577
• Feedback regulation of COOLAIR expression controls seed dormancy and flowering time.   DOI:  10.1126/science.aar7361 ;  PMID:  29853684
• Nuclear Speckle RNA Binding Proteins Remodel Alternative Splicing and the Non-coding Arabidopsis Transcriptome to Regulate a Cross-Talk Between Auxin and Immune Responses.   DOI:  10.3389/fpls.2018.01209 ;  PMID:  30186296
• PRC2 recruitment and H3K27me3 deposition at FLC require FCA binding of COOLAIR.   DOI:  10.1126/sciadv.aau7246 ;  PMID:  31032401
• The Arabidopsis KH-domain protein FLOWERING LOCUS Y delays flowering by upregulating FLOWERING LOCUS C family members.   DOI:  10.1007/s00299-020-02598-w ;  PMID:  32948902
• Antagonistic cotranscriptional regulation through ARGONAUTE1 and the THO/TREX complex orchestrates FLC transcriptional output.   DOI:  10.1073/pnas.2113757118 ;  PMID:  34789567
• Two Arabidopsis Splicing Factors, U2AF65a and U2AF65b, Differentially Control Flowering Time by Modulating the Expression or Alternative Splicing of a Subset of FLC Upstream Regulators.   DOI:  10.3390/plants12081655 ;  PMID:  37111878

Sequences: