Information report for AT5G01600
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
- root , vascular leaf , flower , shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature and News
- Structure and differential expression of the four members of the Arabidopsis thaliana ferritin gene family. DOI: 10.1042/0264-6021:3590575 ; PMID: 11672431
- Classification of genes differentially expressed during water-deficit stress in Arabidopsis thaliana: an analysis using microarray and differential expression data. DOI: 10.1093/aob/mcf104 ; PMID: 12102506
- Mass spectrometric approach for identifying putative plasma membrane proteins of Arabidopsis leaves associated with cold acclimation. DOI: 10.1046/j.1365-313x.2003.01864.x ; PMID: 14535880
- and hydrogen peroxide-dependent signaling of stress responses in Arabidopsis thaliana. DOI: 10.1073/pnas.0609063103 ; PMID: 17197417
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Ferritins control interaction between iron homeostasis and oxidative stress in Arabidopsis. DOI: 10.1111/j.1365-313X.2008.03698.x ; PMID: 18826427
- Nitric oxide modulates ozone-induced cell death, hormone biosynthesis and gene expression in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2008.03756.x ; PMID: 19054359
- NRAMP genes function in Arabidopsis thaliana resistance to Erwinia chrysanthemi infection. DOI: 10.1111/j.1365-313X.2008.03775.x ; PMID: 19121106
- Microbial siderophores exert a subtle role in Arabidopsis during infection by manipulating the immune response and the iron status. DOI: 10.1104/pp.109.138636 ; PMID: 19448037
- Post-translational regulation of AtFER2 ferritin in response to intracellular iron trafficking during fruit development in Arabidopsis. DOI: 10.1093/mp/ssp041 ; PMID: 19825683
- Identification of zinc-responsive proteins in the roots of Arabidopsis thaliana using a highly improved method of two-dimensional electrophoresis. DOI: 10.1093/pcp/pcp154 ; PMID: 19880396
- Carbon monoxide improves adaptation of Arabidopsis to iron deficiency. DOI: 10.1111/j.1467-7652.2009.00469.x ; PMID: 20055961
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- Antioxidant response of Arabidopsis plants to gamma irradiation: Genome-wide expression profiling of the ROS scavenging and signal transduction pathways. DOI: 10.1016/j.jplph.2011.05.008 ; PMID: 21665324
- Iron deficiency affects plant defence responses and confers resistance to Dickeya dadantii and Botrytis cinerea. DOI: 10.1111/j.1364-3703.2012.00790.x ; PMID: 22375884
- Reciprocal interaction of the circadian clock with the iron homeostasis network in Arabidopsis. DOI: 10.1104/pp.112.208603 ; PMID: 23250624
- Iron-dependent modifications of the flower transcriptome, proteome, metabolome, and hormonal content in an Arabidopsis ferritin mutant. DOI: 10.1093/jxb/ert112 ; PMID: 23682113
- Proteome and metabolome profiling of cytokinin action in Arabidopsis identifying and up-regulation. DOI: 10.1093/jxb/ert227 ; PMID: 24064926
- Iron and ferritin dependent ROS distribution impact Arabidopsis root system architecture. DOI: 10.1093/mp/ssu133 ; PMID: 25385697
- and ferritin-dependent reactive oxygen species distribution: impact on Arabidopsis root system architecture. DOI: 10.1016/j.molp.2014.11.014 ; PMID: 25624148
- The PAP/SAL1 retrograde signaling pathway is involved in iron homeostasis. DOI: 10.1007/s11103-019-00950-7 ; PMID: 31900819
- Further insights into the role of bHLH121 in the regulation of iron homeostasis in Arabidopsis thaliana. DOI: 10.1080/15592324.2020.1795582 ; PMID: 32692954
- Knockdown of Quinolinate Phosphoribosyltransferase Results in Decreased Salicylic Acid-Mediated Pathogen Resistance in Arabidopsis thaliana. DOI: 10.3390/ijms22168484 ; PMID: 34445186
- Ethylene Response Factor109 Attunes Immunity, Photosynthesis, and Iron Homeostasis in Arabidopsis Leaves. DOI: 10.3389/fpls.2022.841366 ; PMID: 35310669
- Mass spectrometric approach for identifying putative plasma membrane proteins of Arabidopsis leaves associated with cold acclimation. DOI: 10.1046/j.1365-313x.2003.01864.x ; PMID: 14535880
- In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. DOI: 10.1105/tpc.017814 ; PMID: 14729914
- A reference map of the Arabidopsis thaliana mature pollen proteome. DOI: 10.1016/j.bbrc.2005.09.185 ; PMID: 16242667
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Cell identity mediates the response of Arabidopsis roots to abiotic stress. DOI: 10.1126/science.1153795 ; PMID: 18436742
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: Q0WWC2
- EMBL: AK226433
- AlphaFoldDB: Q0WWC2
- EnsemblPlants: AT5G01600.1
- Gramene: AT5G01600.1
- KEGG: ath:AT5G01600
- Orthologous matrix: NHLVNIE
- ExpressionAtlas: AT5G01600
Sequences
cDNA Sequence
- >AT5G01600.1
TTATGTTGGAAACGCTATCATCTTTTCTTTTTTTTTTTTTATAGTAAACAATTGTATTTGTTATCATCTACAACTCTAAAAAATACATTTCGAAAAATAGGAGAGAGCGAGTAGGAAATAAGAAAGTGGCAACGCGAGAGTAGGAACCGGAAATGGTAAAAAGATTCTGAGGATAAAAGAGAAAGCAGAGAAACAGACAAACTTTATTTGGAGAGATGTTAACGTGGATCGAATATCCTCACGTTCACACTATCCCATTGGATGTAGCACGAGGCCGCCACACGCCCCTACATCTGGCTTTCATATCCACCCTCCACGTGGATCTCAATCCAACGGTGACCACACGCCTTTTCCCTCTTATATAAACCCTTCCTCCTTCCTCTTTCTTATCATCATCACCATCTCTTACAACAAATCTCAGGCGGCTCAACACTATCCTCTTCTACATTTTCCAACGATGGCCTCAAACGCACTCTCGTCTTTCACCGCCGCTAATCCCGCTCTGTCTCCTAAGCCACTACTCCCTCACGGCTCTGCTTCTCCGTCGGTTTCTCTCGGCTTCTCCAGGAAAGTTGGCGGCGGCAGAGCAGTGGTCGTTGCAGCGGCTACGGTGGACACAAACAACATGCCGATGACCGGAGTCGTGTTCCAGCCTTTCGAAGAGGTGAAGAAAGCCGATCTGGCCATTCCAATCACATCTCATGCCTCTCTCGCTCGCCAGAGGTTTGCCGACGCTAGCGAGGCAGTCATTAATGAGCAAATCAATGTGGAATACAACGTCTCCTATGTGTACCATTCAATGTACGCATACTTTGACAGAGACAACGTTGCTATGAAGGGACTAGCCAAATTTTTCAAGGAATCAAGTGAGGAAGAGAGAGGGCATGCTGAGAAGTTTATGGAGTACCAGAACCAAAGAGGAGGAAGAGTGAAACTCCACCCTATCGTCTCACCTATCTCAGAATTCGAACATGCTGAAAAAGGAGATGCTTTATATGCAATGGAGTTGGCTCTGTCTCTAGAGAAACTCACTAATGAGAAGCTTCTAAACGTTCACAAAGTGGCCTCAGAGAACAATGATCCCCAGTTAGCTGATTTCGTTGAGAGTGAATTTCTGGGAGAGCAGATTGAAGCAATCAAGAAGATCTCAGACTACATCACCCAGCTAAGGATGATCGGCAAAGGCCACGGAGTTTGGCATTTCGACCAGATGCTTCTGAACTAGACTTGGACCTCTATAAGTTCACTTTCAGATGACCAATGTTGGGGTTAAAACAGAAGAACCCGAAGATTCTGTAAAAGCTTTAGATTGAACATTATGGACTAATAAGATTGTAGTAGTAAGCTTTGTGTTCAAGATGGTTTTTGTAATAACTTCGTAAGCTTAATCAATGAAGTTTTTGTTTTAGTATATTCTAACT
CDS Sequence
Protein Sequence