Gene Details:

• Gene ID: AT5G01530
• Gene Symbol: LHCB4.1
• Gene Name: light harvesting complex photosystem II
• Description: light harvesting complex photosystem II;(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G01530.1

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Function-related keywords:

• shoot axis apex ,  leaf lamina base ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  pollen ,  guard cell

Literature:

• Cell cycle-regulated gene expression in Arabidopsis.   DOI:  10.1074/jbc.M207570200 ;  PMID:  12169696
• Global and hormone-induced gene expression changes during shoot development in Arabidopsis.   DOI:  10.1105/tpc.006668 ;  PMID:  12417700
• The sfr6 mutant of Arabidopsis is defective in transcriptional activation via CBF/DREB1 and DREB2 and shows sensitivity to osmotic stress.   DOI:  10.1046/j.1365-313x.2003.01734.x ;  PMID:  12753580
• Comparative analysis of the Arabidopsis pollen transcriptome.   DOI:  10.1104/pp.103.020925 ;  PMID:  12805594
• Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.   DOI:  10.1074/jbc.M308435200 ;  PMID:  14576160
• Monitoring genome-wide changes in gene expression in response to endogenous cytokinin reveals targets in Arabidopsis thaliana.   DOI:  10.1016/s0014-5793(03)01194-3 ;  PMID:  14623097
• The Arabidopsis thaliana ABSCISIC ACID-INSENSITIVE8 encodes a novel protein mediating abscisic acid and sugar responses essential for growth.   DOI:  10.1105/tpc.018077 ;  PMID:  14742875
• In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database.   DOI:  10.1105/tpc.017814 ;  PMID:  14729914
• Genome-wide investigation of light and carbon signaling interactions in Arabidopsis.   DOI:  10.1186/gb-2004-5-2-r10 ;  PMID:  14759260
• The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana.   DOI:  10.1186/1471-2229-4-10 ;  PMID:  15171794
• Proteomic approach to characterize the supramolecular organization of photosystems in higher plants.   DOI:  10.1016/j.phytochem.2004.04.022 ;  PMID:  15276430
• New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy.   DOI:  10.1074/jbc.M406763200 ;  PMID:  15322131
• Tocopherol cyclase (VTE1) localization and vitamin E accumulation in chloroplast plastoglobule lipoprotein particles.   DOI:  10.1074/jbc.M511939200 ;  PMID:  16414959
• Transcriptional profiling implicates novel interactions between abiotic stress and hormonal responses in Thellungiella, a close relative of Arabidopsis.   DOI:  10.1104/pp.105.070508 ;  PMID:  16500996
• Nuclear photosynthetic gene expression is synergistically modulated by rates of protein synthesis in chloroplasts and mitochondria.   DOI:  10.1105/tpc.105.039073 ;  PMID:  16517761
• Characterization of an Arabidopsis thaliana mutant lacking a cytosolic non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase.   DOI:  10.1007/s11103-006-0060-5 ;  PMID:  16927206
• PIC1, an ancient permease in Arabidopsis chloroplasts, mediates iron transport.   DOI:  10.1105/tpc.106.047407 ;  PMID:  17337631
• Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques.   DOI:  10.1021/pr060525b ;  PMID:  17432890
• Novel tonoplast transporters identified using a proteomic approach with vacuoles isolated from cauliflower buds.   DOI:  10.1104/pp.107.096917 ;  PMID:  17660356
• The pentatricopeptide repeat gene OTP51 with two LAGLIDADG motifs is required for the cis-splicing of plastid ycf3 intron 2 in Arabidopsis thaliana.   DOI:  10.1111/j.1365-313X.2008.03581.x ;  PMID:  18557832
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis.   DOI:  10.1104/pp.108.124545 ;  PMID:  18633119
• Unique and overlapping expression patterns among members of photosynthesis-associated nuclear gene families in Arabidopsis.   DOI:  10.1104/pp.108.126946 ;  PMID:  18820083
• A specific binding site for neoxanthin in the monomeric antenna proteins CP26 and CP29 of Photosystem II.   DOI:  10.1016/j.febslet.2007.08.066 ;  PMID:  17850797
• Site-directed spin-labeling study of the light-harvesting complex CP29.   DOI:  10.1016/j.bpj.2009.01.038 ;  PMID:  19413967
• Identification of the chromophores involved in aggregation-dependent energy quenching of the monomeric photosystem II antenna protein Lhcb5.   DOI:  10.1074/jbc.M110.124115 ;  PMID:  20584907
• High light induced disassembly of photosystem II supercomplexes in Arabidopsis requires STN7-dependent phosphorylation of CP29.   DOI:  10.1371/journal.pone.0024565 ;  PMID:  21915352
• Arabidopsis mutants deleted in the light-harvesting protein Lhcb4 have a disrupted photosystem II macrostructure and are defective in photoprotection.   DOI:  10.1105/tpc.111.087320 ;  PMID:  21803939
• Endogenous Arabidopsis messenger RNAs transported to distant tissues.   DOI:  10.1038/nplants.2015.25 ;  PMID:  27247031
• Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method.   DOI:  10.3390/biom10040661 ;  PMID:  32344669
• Loss of a single chlorophyll in CP29 triggers re-organization of the Photosystem II supramolecular assembly.   DOI:  10.1016/j.bbabio.2022.148555 ;  PMID:  35378087
• Shade represses photosynthetic genes by disrupting the DNA binding of GOLDEN2-LIKE1.   DOI:  10.1093/plphys/kiad029 ;  PMID:  36702576
• In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database.   DOI:  10.1105/tpc.017814 ;  PMID:  14729914
• The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.   DOI:  10.1016/j.cub.2004.02.039 ;  PMID:  15028209
• New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy.   DOI:  10.1074/jbc.M406763200 ;  PMID:  15322131
• Tocopherol cyclase (VTE1) localization and vitamin E accumulation in chloroplast plastoglobule lipoprotein particles.   DOI:  10.1074/jbc.M511939200 ;  PMID:  16414959
• Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques.   DOI:  10.1021/pr060525b ;  PMID:  17432890
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis.   DOI:  10.1104/pp.108.124545 ;  PMID:  18633119

Sequences: