Gene Details:
- Gene ID: AT5G01520
- Gene Symbol: AIRP2, AtAIRP2
- Gene Name: ABA Insensitive RING Protein 2
- Description: RING/U-box superfamily protein;(source:Araport11)
- TAIR Accession: locus:2149750
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0061630 — enables — ubiquitin protein ligase activity
- GO:0006511 — acts upstream of or within — ubiquitin-dependent protein catabolic process
- GO:0005829 — located in — cytosol
- GO:0004842 — enables — ubiquitin-protein transferase activity
Function-related keywords:
- leaf lamina base , plant embryo , vascular leaf , stamen , sepal , flower , cotyledon , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis. DOI: 10.1104/pp.104.052423 ; PMID: 15644464
- Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis. DOI: 10.1104/pp.105.067983 ; PMID: 16339806
- CONSTITUTIVELY PHOTOMORPHOGENIC1 is required for the UV-B response in Arabidopsis. DOI: 10.1105/tpc.105.040097 ; PMID: 16829591
- Arabidopsis ESK1 encodes a novel regulator of freezing tolerance. DOI: 10.1111/j.1365-313X.2006.02994.x ; PMID: 17316173
- Genome-wide expression profiling Arabidopsis at the stage of Golovinomyces cichoracearum haustorium formation. DOI: 10.1104/pp.107.111286 ; PMID: 18218973
- The relationship of drought-related gene expression in Arabidopsis thaliana to hormonal and environmental factors. DOI: 10.1093/jxb/ern155 ; PMID: 18552355
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Sequences:
cDNA Sequence
- >AT5G01520.2
GTTGCCGTTCCTTGTCGAACAAAAAAGAGCTTTAGACAGACGCTCCTCCCCTTTTGTAATATTTTTGATATTACGTGTGCTCTACGCGAATCTATCAATATCTAAATCCTCTCTTTCTCTCTCTCTCTCCTCCTTCTTCTTCTTCTTCCTGTCGCTGCCTTGTGGTTGAGTGAGCAAAAAAACTCAAAACCCTCCATGGAAATGGGAGAGAGAATCAATTCGAGTTGTTGTTAGGGGGTTTGCGATATTTTAGGCTTCTGTCGGTGATCTCGACCAAAAAAAATAAACAAAGGAGCTAGTAGGGTTCTGTTTTCTCTATCACTCGGAAGGAAGCTGGTTTATGTCAAAACTTTGTTCTTCGGAAAATGCGAAAATCGTTCAAGGATTCACTCAAGGCTCTTGAAGCTGATATCCAGTTCGCCAACACTCTGGCGTCAGAGTACCCAGAGGAGTATGATGGTGGCTACGTTCAGATGAGATTATCTTACAGCCCGGCGGCTCATCTCTTTCTCTTCCTTCTTCAGTGGACTGATTGTCATTTCGCTGGCGCTTTGGGCTTGCTTAGGATCCTTATTTATAAGGCATATGTTGATGGGAAGACCACAATGTCGCTACATGAACGCAAAACTAGTATCAGAGAATTCTATGATGTGTTGTTTCCTTCGCTATTGCAACTTCATGGAGGGATCACCGATGTAGAAGAAAGGAAACAGAAGGAGATATGCGACAAAAGATACCGTAAAAAGGACAGAACAGATAAAGGAAAGATGTCGGAGATCGATTTGGAGAGGGAAGAAGAGTGTGGAATCTGCTTGGAGATTCGAAACAAAGTTGTTCTTCCTACGTGCAATCACTCCATGTGTATAAACTGCTACAGAAACTGAATCTCTTGTTTGGAATAGGCGTGCACGGTCACAGTCGTGCCCGTTCTGTCGAGGCAGCTTGAAAAGAGTGAATTCTGGTGATCTATGGATATACACTTGTAGCGCCGAGATTGCAGATTTACCAGCGATTTACAAGGAGAATCTGAAGAGGTTGTTGATATACATTGACAAGTTGCCTCTCGTTACTTCTGATCCAAATCTTGTCCCTTATGCTCCTCTTCCTCGGTGAACATTACATTCTCTCTGTTTCTTGTTATGCACATAGCAATTTCTTTCAAACAAATTTCATCTATTTATGTCCACTTTGTATATAATATTTATGTGTTTTTAGTTGGTTTTTCATCTTTCTATAGTCTCAGATTTGGGTTTGTATATAACAACCATTGGTTATTGACATTTAGATCAAAAATTCGATATCATATTTGCTGATTAAGGGTACTT - >AT5G01520.1
GTTGCCGTTCCTTGTCGAACAAAAAAGAGCTTTAGACAGACGCTCCTCCCCTTTTGTAATATTTTTGATATTACGTGTGCTCTACGCGAATCTATCAATATCTAAATCCTCTCTTTCTCTCTCTCTCTCCTCCTTCTTCTTCTTCTTCCTGTCGCTGCCTTGTGGTTGAGTGAGCAAAAAAACTCAAAACCCTCCATGGAAATGGGAGAGAGAATCAATTCGAGTTGTTGTTAGGGGGTTTGCGATATTTTAGGCTTCTGTCGGTGATCTCGACCAAAAAAAATAAACAAAGGAGCTAGTAGGGTTCTGTTTTCTCTATCACTCGGAAGGAAGCTGGTTTATGTCAAAACTTTGTTCTTCGGAAAATGCGAAAATCGTTCAAGGATTCACTCAAGGCTCTTGAAGCTGATATCCAGTTCGCCAACACTCTGGCGTCAGAGTACCCAGAGGAGTATGATGGTGGCTACGTTCAGATGAGATTATCTTACAGCCCGGCGGCTCATCTCTTTCTCTTCCTTCTTCAGTGGACTGATTGTCATTTCGCTGGCGCTTTGGGCTTGCTTAGGATCCTTATTTATAAGGCATATGTTGATGGGAAGACCACAATGTCGCTACATGAACGCAAAACTAGTATCAGAGAATTCTATGATGTGTTGTTTCCTTCGCTATTGCAACTTCATGGAGGGATCACCGATGTAGAAGAAAGGAAACAGAAGGAGATATGCGACAAAAGATACCGTAAAAAGGACAGAACAGATAAAGGAAAGATGTCGGAGATCGATTTGGAGAGGGAAGAAGAGTGTGGAATCTGCTTGGAGATTCGAAACAAAGTTGTTCTTCCTACGTGCAATCACTCCATGTGTATAAACTGCTACAGAAACTGAATCTCTTGTTTGGAATAGGCGTGCACGGTCACAGTCGTGCCCGTTCTGTCGAGGCAGCTTGAAAAGAGTGAATTCTGGTGATCTATGGATATACACTTGTAGCGCCGAGATTGCAGATTTACCAGCGATTTACAAGGAGAATCTGAAGAGGTTGTTGATATACATTGACAAGTTGCCTCTCGTTACTTCTGATCCAAATCTTGTCCCTTATGCTCCTCTTCCTCGGTGAACATTACATTCTCTCTGTTTCTTGTTATGCACATAGCAATTTCTTTCAAACAAATTTCATCTATTTATGTCCACTTTGTATATAATATTTATGTGTTTTTAGTTGGTTTTTCATCTTTCTATAGTCTCAGATTTGGGTTTGTATATAACAACCATTGGTTATTGACATTTAGATCAAAAATTCGATATCATATTTGCTGATTAAGGGTACTT
CDS Sequence
Protein Sequence