Information report for AT5G01450
Gene Details
|
|
Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Four closely-related RING-type E3 ligases, APD1-4, are involved in pollen mitosis II regulation in Arabidopsis. DOI: 10.1111/j.1744-7909.2012.01152.x ; PMID: 22897245
- Linking genes of unknown function with abiotic stress responses by high-throughput phenotype screening. DOI: 10.1111/ppl.12013 ; PMID: 23517122
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Gene Resources
- UniProt: A0A178U8I6
- EMBL: CACRSJ010000110, LR881470, LUHQ01000005
- AlphaFoldDB: A0A178U8I6
- EnsemblPlants: AT5G01450.1
- Gramene: AT5G01450.1
- KEGG: ath:AT5G01450
- Orthologous matrix: HNTTNAY
- ExpressionAtlas: AT5G01450
- InterPro: IPR001841, IPR013083, IPR032008
- PANTHER: PTHR46858, PTHR46858:SF8
- SUPFAM: SSF57850
- PROSITE: PS50089
- Gene3D: 3.30.40.10
- SWISS-MODEL: A0A178U8I6
Sequences
cDNA Sequence
- >AT5G01450.1
TTAAGATAAGAAAATAAATGTTTTACTTTTTCCAAAGTCGTCGTCTCTCTCCAAGTTTTGTGAATCCACCGTTCAACGTGACGATGAAGAAAGAGAAGAAGCCGACCCGTCGTTCAAATCATCCTTCGTTCCTCAACAACATTAACCCCAAACCTAAGGTTAGGGTTTTACCTTTATCTCTTCAATTTCTTCATTCCTCTCATCGATTCGCGACAACATGTCTCTACCGGATTCTCTCCCATCTTCTTCTTCTTCTCCGCCTGTGACCCGTGAAGAAACCGGCTTTCATCGCTTTGAACATCACGGCAACGATTCCGGTTTTGATCATCGTGATCGTCCACCGTGGAATCGTTCTGAGTACGATTATCGCCATGGAAGCGTTGTTGCATCTGAGAACGTCAGGAACAATTCCACTTCTGAAGACCCTTGGTCTTGCGTTGTCGTCGTTGCTACCTTCTGTATCTTTGTGTCGATGACTTTGATTCTGGGGCTTTATGGAACAACGAATGTCTGGTTGGGACCAAACTCTTCGTTTCTTATTAAGCCAACTTCAGTGTTCGTCCAAAATGTCATTGTGGAAGAATTAGGGAACAAGGGATCTGGTTTGATACTGTATGGATTGAACCAAGCCCCACAGCTTGATGTTCTGACTAAATGGTCCGAAGTTCACTATCTAGCTGTGCCTAATGATTCTTACAAGTATTGGATACAGTATTTGAACAAGGGGTCACGCGTAAAAGTTTCATACAACGTTGAATCTGTGGGTTCTTCCTTATACCTTGTGATAGCCCAAGGTGTGGATGGGCTCTCTGAGTGGGTACAAGATCCGACGCGTCCAGACACTACACTGTCGTGGCATATAATCTCTGATAGTGGTTATATTGAGCAGGACATAACTAAGTCGTCGAGTTATTATGTTGCAGTAGGCAACGTATACCTGAATGAAGTGAAGGCGACGATTGACATTCAAGTTGAGGGGGTATTGTATGATACTACAAATGCTTATTACAATTGCTCTTTCCCTAACGACAAGTGCACTCTAAGTGTTCCATTATTTGGAACTAATGCTGCTGTACTAACCTCACCAGGTCCAAAGCTGAACAATTCTAAGAATGAGTTCTGCGCAAAACTCTCATATGAACCAAGGTGGATTGCATACATAGTTTGCATGGGTGTAGTGACAGCACTCTTGTTAATTGTCTCGAGTCTCTTCAATAAACGACAACCAGTCACTGAAGATGAAACCGTTGATGAAAATGATGATGTAGCTCCTCTAATTCCGGGAAAAGACGATGATAACTCAAGCTGGTGCTCGTCCTACAGTTCTATTTTGACGAGTACAGAGGAATTGGAAGGTGCACATGGTGAAGGCCACAGTAGTACAAGATATCTATGTGCAATTTGCTATGATGCGCCTAGAGACTGTTTCTTCCTCTCTTGTGGACACTGCGTTGCTTGCTTCCAGTGCGGGACACGGATAGCTGAAACTTCGGGTTTTTGTCCGGTATGCCGTAAGAAGATCAGGAAGGTCAAGAAGATCTTCAATGTCTAACAGAGAGAATGAATAACACACAATGCAACGTTGCTTGCTGTTTCTGTTTCCTCGCATTACCATATCCGTTGTATAAATGTAAAAGACAAGTGTGGGACGGAGAAAAGCAAGAAGGTTCTGGCGTCTGTGTTACTGCTGTCTGTATATGAAATGATATGGATTCCGGAGTTTCCGCTTCGTTGTACTTGTAACCATATTTCATTGAACCCGGTTGAAATTTTATTTTTCCGATTCGATAACTGTTTAGCGTCTGGTTTGCAGCGTAATTTCTTGTTTGTGTAACAACAAATATGTCTGACCATGTATAGAACTTGCGAATTTTCACGTTTTTAATCATTTTCTGAAATTTTCCAATATTCATTCAA
CDS Sequence
Protein Sequence