Gene Details:

• Gene ID: AT5G01310
• Gene Symbol: APTX
• Gene Name: APRATAXIN-like
• Description: APRATAXIN-like protein;(source:Araport11)
• TAIR Accession: locus:2179122
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G01310.1

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)

Gene Ontology:

• GO:1990165  — enables — single-strand break-containing DNA binding
• GO:0003725  — enables — double-stranded RNA binding
• GO:0009150  — acts upstream of or within — purine ribonucleotide metabolic process
• GO:0030983  — enables — mismatched DNA binding
• GO:0000012  — involved in — single strand break repair
• GO:0033699  — enables — DNA 5-adenosine monophosphate hydrolase activity GO:0033699 28502 F nuclease activity IBA none PANTHER:PTN000281062|PomBase:SPCC18.09c|UniProtKB:Q7Z2E3|SGD:S000005784|UniProtKB:P61798|MGI:MGI:1913658 Communication:501741973 2023-06-07 AT5G01310 locus:2179122 AT5G01310 enables protein dimerization activity GO:0046983 15253 F protein binding IEA none InterPro:IPR011598|InterPro:IPR036638 AnalysisReference:501756966 2023-06-11 AT5G01310 locus:2179122 AT5G01310 enables adenylylsulfatase activity GO:0047627 16004 F hydrolase activity IDA in vitro assay Publication:501735495|PMID:19896942 TAIR 2010-03-15 AT5G01310 locus:2179122 AT5G01310 is active in nucleus GO:0005634 537 C nucleus IBA none PANTHER:PTN000281062|UniProtKB:Q7Z2E3|UniProtKB:Q57WA7 Communication:501741973 2022-11-23 AT5G01310 locus:2179122 AT5G01310 acts upstream of or within sulfur compound metabolic process GO:0006790 7358 P other cellular processes IDA in vitro assay NONE Publication:501735495|PMID:19896942 TAIR 2010-03-15 AT5G01310 locus:2179122 AT5G01310 acts upstream of or within sulfur compound metabolic process GO:0006790 7358 P other metabolic processes IDA in vitro assay NONE Publication:501735495|PMID:19896942 TAIR 2010-03-15 AT5G01310 locus:2179122 AT5G01310 involved in single strand break repair GO:0000012 7248 P other cellular processes IBA none PANTHER:PTN000281062|UniProtKB:Q7Z2E3|MGI:MGI:1913658 Communication:501741973 2023-04-13 AT5G01310 gene:2179121 AT5G01310.1 located in nucleus GO:0005634 537 C nucleus ISM predicted protein features AnalysisReference:501780126 rkaundal 2018-08-31 AT5G01310 locus:2179122 AT5G01310 enables DNA 5-adenosine monophosphate hydrolase activity
• GO:0003697  — enables — single-stranded DNA binding

Function-related keywords:

• shoot axis apex ,  plant embryo ,  sepal ,  flower ,  inflorescence flower pedicel ,  collective leaf structure

Literature:

• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• A nick-sensing DNA 3'-repair enzyme from Arabidopsis.   DOI:  10.1074/jbc.M201411200 ;  PMID:  11948185
• The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.   DOI:  10.1093/molbev/msg088 ;  PMID:  12679534
• The Arabidopsis basic/helix-loop-helix transcription factor family.   DOI:  10.1105/tpc.013839 ;  PMID:  12897250
• Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.   DOI:  10.1074/jbc.M308435200 ;  PMID:  14576160
• Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana.   DOI:  10.1105/tpc.151140 ;  PMID:  14600211
• Eukaryotic transcription factors in plastids–Bioinformatic assessment and implications for the evolution of gene expression machineries in plants.   DOI:  10.1016/j.gene.2006.06.022 ;  PMID:  16934950
• The bHLH protein ROX acts in concert with RAX1 and LAS to modulate axillary meristem formation in Arabidopsis.   DOI:  10.1111/j.1365-313X.2012.04970.x ;  PMID:  22372440
• Systematic identification of functional plant modules through the integration of complementary data sources.   DOI:  10.1104/pp.112.196725 ;  PMID:  22589469
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.   DOI:  10.1093/molbev/msg088 ;  PMID:  12679534

Sequences: