Information report for AT5G01240
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- GO:0005886 — located in — plasma membrane
- GO:0010262 — acts upstream of or within — somatic embryogenesis
- GO:0016020 — is active in — membrane
- GO:0003333 — involved in — amino acid transmembrane transport
- GO:0015171 — enables — amino acid transmembrane transporter activity
- GO:0048829 — acts upstream of or within — root cap development
- GO:0010328 — enables — auxin influx transmembrane transporter activity
Functional Keywords
Literature and News
- The Arabidopsis transcription factor HY5 integrates light and hormone signaling pathways. DOI: 10.1111/j.1365-313X.2004.02052.x ; PMID: 15078335
- Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database. DOI: 10.1105/tpc.104.023150 ; PMID: 15308754
- Structure-function analysis of the presumptive Arabidopsis auxin permease AUX1. DOI: 10.1105/tpc.104.024737 ; PMID: 15486104
- Regulation of genes associated with auxin, ethylene and ABA pathways by 2,4-dichlorophenoxyacetic acid in Arabidopsis. DOI: 10.1007/s10142-005-0012-1 ; PMID: 16317577
- Genome-wide transcriptional analysis of the Arabidopsis thaliana interaction with the plant pathogen Pseudomonas syringae pv. tomato DC3000 and the human pathogen Escherichia coli O157:H7. DOI: 10.1111/j.1365-313X.2006.02725.x ; PMID: 16553894
- Conservation of noncoding microsatellites in plants: implication for gene regulation. DOI: 10.1186/1471-2164-7-323 ; PMID: 17187690
- An integrated view of gene expression and solute profiles of Arabidopsis tumors: a genome-wide approach. DOI: 10.1105/tpc.106.044743 ; PMID: 17172353
- Interactions among PIN-FORMED and P-glycoprotein auxin transporters in Arabidopsis. DOI: 10.1105/tpc.106.040782 ; PMID: 17237354
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The auxin influx carrier LAX3 promotes lateral root emergence. DOI: 10.1038/ncb1754 ; PMID: 18622388
- The AUX1 LAX family of auxin influx carriers is required for the establishment of embryonic root cell organization in Arabidopsis thaliana. DOI: 10.1093/aob/mcp287 ; PMID: 19952011
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- AUX/LAX genes encode a family of auxin influx transporters that perform distinct functions during Arabidopsis development. DOI: 10.1105/tpc.112.097766 ; PMID: 22773749
- The manipulation of auxin in the abscission zone cells of Arabidopsis flowers reveals that indoleacetic acid signaling is a prerequisite for organ shedding. DOI: 10.1104/pp.113.216234 ; PMID: 23509178
- Plant embryogenesis requires AUX/LAX-mediated auxin influx. DOI: 10.1242/dev.115832 ; PMID: 25617434
- Auxin Import and Local Auxin Biosynthesis Are Required for Mitotic Divisions, Cell Expansion and Cell Specification during Female Gametophyte Development in Arabidopsis thaliana. DOI: 10.1371/journal.pone.0126164 ; PMID: 25970627
- Auxin influx importers modulate serration along the leaf margin. DOI: 10.1111/tpj.12921 ; PMID: 26111009
- Parsimonious Model of Vascular Patterning Links Transverse Hormone Fluxes to Lateral Root Initiation: Auxin Leads the Way, while Cytokinin Levels Out. DOI: 10.1371/journal.pcbi.1004450 ; PMID: 26505899
- Modelling the dynamics of polar auxin transport in inflorescence stems of Arabidopsis thaliana. DOI: 10.1093/jxb/erv471 ; PMID: 26531101
- Nitrogen remobilization during leaf senescence: lessons from Arabidopsis to crops. DOI: 10.1093/jxb/erw365 ; PMID: 27707774
- A role for LAX2 in regulating xylem development and lateral-vein symmetry in the leaf. DOI: 10.1093/aob/mcx091 ; PMID: 28981582
- Arabidopsis thaliana homeodomain-leucine zipper type I transcription factors contribute to control leaf venation patterning. DOI: 10.1080/15592324.2018.1448334 ; PMID: 29509063
- Arabidopsis and sunflower plants with increased xylem area show enhanced seed yield. DOI: 10.1111/tpj.14356 ; PMID: 31009150
- The role of auxin transporters and receptors in adventitious rooting of Arabidopsis thaliana pre-etiolated flooded seedlings. DOI: 10.1016/j.plantsci.2019.110294 ; PMID: 31779904
- Local regulation of auxin transport in root-apex transition zone mediates aluminium-induced Arabidopsis root-growth inhibition. DOI: 10.1111/tpj.15424 ; PMID: 34273207
- Phototropin-mediated perception of light direction in leaves regulates blade flattening. DOI: 10.1093/plphys/kiab410 ; PMID: 34618121
- Endogenous auxin maintains embryonic cell identity and promotes somatic embryo development in Arabidopsis. DOI: 10.1111/tpj.16024 ; PMID: 36345646
Gene Resources
- UniProt: F4K7Z8
- EMBL: CP002688
- AlphaFoldDB: F4K7Z8
- EnsemblPlants: AT5G01240.2
- Gramene: AT5G01240.2
Sequences
cDNA Sequence
- >AT5G01240.2
GTTTTTTTTTAATATTCTTTCATAAAACATTCTTGAAATAAATAACAACTTAAGTTATAAAAACAAAAATATATGGTTGCAGGTGGCACAAGTGCTGTTGACGCTGCCGTATTCGTTCTCGCAGTTGGGAATGTTATCAGGAATATTGCTTCAAATATTCTATGGGTTAATGGGATCTTGGACTGCTTATCTCATCAGTGTTCTTTACGTCGAGTATCGTGCCCGTATGGAGAAACAAGAAGCCAAATCCTTCAAAAACCACGTTATTCAATGGTTTGAAGTGCTTGATGGGCTGCTGGGTCCGTACTGGAAAGCAGCGGGGCTCGCATTTAATTGCACCTTCTTGTTATTCGGATCAGTCATCCAGCTCATTGCTTGTGCTAGCAATATATATTACATAAACGATAGGTTAGACAAGAGGACATGGACTTATATATTTGGGGCTTGCTGTGCCACGACCGTTTTCATACCATCTTTCCACAATTACCGTATTTGGTCTTTCCTCGGCCTTGGCATGACCACCTACACCGCTTGGTACCTCACCATCGCCTCTTTTCTCCATGGTCAGGCGGAGGGTGTGACACATTCCGGTCCAACCAAGCTTGTGTTGTACTTTACCGGAGCCACCAACATCCTCTATACCTTCGGTGGACACGCTGTGACCGTGGAAATAATGCATGCGATGTGGAAACCAAGGAAGTTTAAGAGCATCTACTTGATGGCAACTCTGTACGTCTTCACATTAACGCTTCCGTCAGCCTCCGCCGTCTACTGGGCTTTCGGCGACCAACTTCTCAACCACTCAAACGCTTTCTCTCTCCTCCCTAAAACGCGTTTCCGTGACACCGCCGTTATCCTCATGCTCATCCATCAGTTTATAACGTTCGGGTTTGCGTGTACACCATTGTACTTCGTATGGGAAAAAGCGATCGGAATGCACCACACAAAGAGCTTATGTCTAAGAGCGCTGGTGAGGCTACCGGTGGTGGTTCCGATATGGTTTTTGGCAATCATCTTTCCCTTTTTCGGGCCAATAAACTCGGCAGTTGGAGCCTTACTTGTTACCTTCACCGTCTATATCATCCCTGCCTTAGCCCACATGCTCACGTACCGCACCGCCTCTGCCCGCCGGAACGCGGCGGAGAAACCACCGTTTTTTATCCCTAGCTGGGCTGGAGTTTACGTGATAAACGCTTTCATAGTGGTTTGGGTCCTAGTTCTCGGGTTCGGGTTTGGCGGATGGGCCAGTATGACCAACTTCATCAGGCAAATTGATACTTTTGGCCTCTTTGCCAAATGCTACCAATGCAAACCACCTCCAGCTCCGATCGCCGCCGGAGCTCACCACCGCCGTTAGTTAACGTAAGCGACGTGTGATAGTGTGATTGAACCCTTTTTTCTTTAATTCTGTATGAAAGAAAATATCTGTAATTCAGTGATTTAGTGAATCTATGCTATAAAATTTCGTTGAAGTCACGTACGTGATTAGGGAGCTGGTGCTGTTTTGTGTTGTCACGTGCCAGTCTTCAGTTTTATGACAGACTAATAGGTCTTCCTAACTGGTAGAAAACAACTGGGTGAGGACAAAATGGTTTTCATTTTTATCAATCAGCCAATCTGTCATATTTGACTCCGAGAGGACAATACAAACATTTTGTATAACCATTTTAATCAATCCAACTTTCGAATTAATGTAAAA - >AT5G01240.1
GTTTTTTTTTAATATTCTTTCATAAAACATTCTTGAAATAAATAACAACTTAAGTTATAAAAACAAAAATATATGGTTGCAGGTGGCACAAGTGCTGTTGACGCTGCCGTATTCGTTCTCGCAGTTGGGAATGTTATCAGGAATATTGCTTCAAATATTCTATGGGTTAATGGGATCTTGGACTGCTTATCTCATCAGTGTTCTTTACGTCGAGTATCGTGCCCGTATGGAGAAACAAGAAGCCAAATCCTTCAAAAACCACGTTATTCAATGGTTTGAAGTGCTTGATGGGCTGCTGGGTCCGTACTGGAAAGCAGCGGGGCTCGCATTTAATTGCACCTTCTTGTTATTCGGATCAGTCATCCAGCTCATTGCTTGTGCTAGCAATATATATTACATAAACGATAGGTTAGACAAGAGGACATGGACTTATATATTTGGGGCTTGCTGTGCCACGACCGTTTTCATACCATCTTTCCACAATTACCGTATTTGGTCTTTCCTCGGCCTTGGCATGACCACCTACACCGCTTGGTACCTCACCATCGCCTCTTTTCTCCATGGTCAGGCGGAGGGTGTGACACATTCCGGTCCAACCAAGCTTGTGTTGTACTTTACCGGAGCCACCAACATCCTCTATACCTTCGGTGGACACGCTGTGACCGTGGAAATAATGCATGCGATGTGGAAACCAAGGAAGTTTAAGAGCATCTACTTGATGGCAACTCTGTACGTCTTCACATTAACGCTTCCGTCAGCCTCCGCCGTCTACTGGGCTTTCGGCGACCAACTTCTCAACCACTCAAACGCTTTCTCTCTCCTCCCTAAAACGCGTTTCCGTGACACCGCCGTTATCCTCATGCTCATCCATCAGTTTATAACGTTCGGGTTTGCGTGTACACCATTGTACTTCGTATGGGAAAAAGCGATCGGAATGCACCACACAAAGAGCTTATGTCTAAGAGCGCTGGTGAGGCTACCGGTGGTGGTTCCGATATGGTTTTTGGCAATCATCTTTCCCTTTTTCGGGCCAATAAACTCGGCAGTTGGAGCCTTACTTGTTACCTTCACCGTCTATATCATCCCTGCCTTAGCCCACATGCTCACGTACCGCACCGCCTCTGCCCGCCGGAACGCGGCGGAGAAACCACCGTTTTTTATCCCTAGCTGGGCTGGAGTTTACGTGATAAACGCTTTCATAGTGGTTTGGGTCCTAGTTCTCGGGTTCGGGTTTGGCGGATGGGCCAGTATGACCAACTTCATCAGGCAAATTGATACTTTTGGCCTCTTTGCCAAATGCTACCAATGCAAACCACCTCCAGCTCCGATCGCCGCCGGAGCTCACCACCGCCGTTAGTTAACGTAAGCGACGTGTGATAGTGTGATTGAACCCTTTTTTCTTTAATTCTGTATGAAAGAAAATATCTGTAATTCAGTGATTTAGTGAATCTATGCTATAAAATTTCGTTGAAGTCACGTACGTGATTAGGGAGCTGGTGCTGTTTTGTGTTGTCACGTGCCAGTCTTCAGTTTTATGACAGACTAATAGGTCTTCCTAACTGGTAGAAAACAACTGGGTGAGGACAAAATGGTTTTCATTTTTATCAATCAGCCAATCTGTCATATTTGACTCCGAGAGGACAATACAAACATTTTGTATAACCATTTTAATCAATCCAACTTTCGAATTAATGTAAAA
CDS Sequence
Protein Sequence