AT5G01230

Gene Details

Gene ID: AT5G01230
Gene Symbol: AtTRM7a, SCS9, TRM7a
Gene Name: UPPRESSOR OF CSB3 9, tRNA methyltransferase 7
Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)
TAIR Accession: locus:2150069
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

GO:0005634 — located in — nucleus
GO:0005737 — is active in — cytoplasm
GO:0042742 — acts upstream of or within — defense response to bacterium
GO:0030488 — acts upstream of or within — tRNA methylation
GO:0005737 — located in — cytoplasm
GO:0030488 — involved in — tRNA methylation
GO:0106339 — enables — tRNA (cytidine 32-2-O)-methyltransferase activity GO:0106339 58055 F catalytic activity IEA none EC:2.1.1.205 AnalysisReference:501756967 2023-06-11 AT5G01230 locus:2150069 AT5G01230 acts upstream of or within tRNA methylation GO:0030488 10754 P other cellular processes IMP Functional complementation NONE Publication:501766677|PMID:26492405 TAIR 2015-11-30 AT5G01230 locus:2150069 AT5G01230 enables tRNA methyltransferase activity GO:0008175 4352 F transferase activity IMP Functional complementation Publication:501766677|PMID:26492405 TAIR 2015-11-30 AT5G01230 locus:2150069 AT5G01230 acts upstream of or within defense response to bacterium GO:0042742 14972 P response to stress IMP analysis of physiological response NONE Publication:501766677|PMID:26492405 TAIR 2015-11-30 AT5G01230 locus:2150069 AT5G01230 involved in cytoplasmic translation GO:0002181 38028 P translation IBA none PANTHER:PTN000100323|SGD:S000000265 Communication:501741973 2021-03-31 AT5G01230 locus:2150069 AT5G01230 involved in tRNA methylation GO:0030488 10754 P other cellular processes IBA none PANTHER:PTN000100323|FB:FBgn0038471|FB:FBgn0038861|SGD:S000000265|TAIR:locus:2150069|PomBase:SPAC4F10.03c|UniProtKB:Q9UET6 Communication:501741973 2023-06-07 AT5G01230 locus:2150069 AT5G01230 involved in tRNA methylation GO:0030488 10754 P other metabolic processes IBA none PANTHER:PTN000100323|FB:FBgn0038471|FB:FBgn0038861|SGD:S000000265|TAIR:locus:2150069|PomBase:SPAC4F10.03c|UniProtKB:Q9UET6 Communication:501741973 2023-06-07 AT5G01230 locus:2150069 AT5G01230 enables tRNA methyltransferase activity GO:0008175 4352 F catalytic activity IMP Functional complementation Publication:501766677|PMID:26492405 TAIR 2015-11-30 AT5G01230 gene:1005027752 AT5G01230.2 located in cytoplasm GO:0005737 231 C cytoplasm ISM predicted protein features AnalysisReference:501780126 rkaundal 2018-08-31 AT5G01230 locus:2150069 AT5G01230 enables tRNA methyltransferase activity GO:0008175 4352 F catalytic activity IBA none PANTHER:PTN000100323|FB:FBgn0038861|TAIR:locus:2150069|FB:FBgn0038471|SGD:S000000265|PomBase:SPAC4F10.03c|UniProtKB:Q9UET6 Communication:501741973 2023-06-07 AT5G01230 locus:2150069 AT5G01230 enables tRNA methyltransferase activity GO:0008175 4352 F transferase activity IBA none PANTHER:PTN000100323|FB:FBgn0038861|TAIR:locus:2150069|FB:FBgn0038471|SGD:S000000265|PomBase:SPAC4F10.03c|UniProtKB:Q9UET6 Communication:501741973 2023-06-07 AT5G01230 locus:2150069 AT5G01230 enables tRNA (cytidine 32-2-O)-methyltransferase activity

Functional Keywords

Literature and News

Gene Resources

Sequences

cDNA Sequence

>AT5G01230.2
GAATCGGTTTTTGTTCTCTCACACAGTCTTCTTCACTTGGCTCTACCTTGAATTTCTACTTTGGTGCTACTCTTCTTCACATACCTAGCTGCTGTATACTATACGTGAACCAACTCCGTATTCTACTTTAGAGGCCATGGGAAAAGCTTCTCGAGACAAAAGGGATATCTATTATCGTAAAGCTAAAGAAGAAGGATGGCGTGCAAGAAGTGCTTTTAAGCTTCTTCAGATTGATGAAGAATTTAATATTTTTGAAGGTGTGAAGAGGGTCGTAGATTTATGTGCTGCACCTGGTAGCTGGAGTCAGAGTGGGAGGAGTTAAATATGGTAAACAGAAGATGATAAGCATTGGGAAATTGAGTTGAGAGAGCAGGGATGCTGTAAAATTAATCTCTGAAGTTCTTTGTTTGGTTGATCCTCGGTTCCCAGTGGAAAAGTTAAAGAGAAACACGTTTTGAATTTTATCAGTGCACTGCATTTGTAGGTCTTGAGTCGTCAATTATATCTTCCTGCAAAGTCCTCAGCTGAGTCAAAAGATGGGGATCTTCCTCTTATAGTAGCCATCGATTTGCAGCCTATGGCTCCAATTGAAGGTGTCATCCAGGTTCAAGGGGACATAACTAATGCTCGGACTGCTGAAGTGGTCATTAGACACTTTGACGGCTGCAAAGCGGACCTGGTTGTCTGTGATGGTGCTCCAGATGGTAAAACAGTAGATAAAGTGTCTGTCTCGCCGTTCAATATATACGTTATGCTATAAAAAACGCCTTTTACAATTTGGTTTGCAGTTACTGGTTTGCATGACATGGATGAATTTGTCCAGTCCCAACTCATACTAGCAGGATTAACGATTGTAACTCATATTCTTAAAGAAGGTGGAAAATTTATTGCAAAGATATTCCGTGGAAAAGATACAAGTCTCTTGTACTGTCAACTGAAATTGTTTTTCCCAACCGTAACTTTTGCGAAACCGAAAAGCAGCCGCAATTCAAGTATAGAGGCTTTTGCAGTCTGCGAGAATTACTCTCCGCCAGAAGGATTTAACCCGAGAGATCTGCATCGTCTCTTGGAGAAAGTCGGAAGCCCTTCAGGTGGAAGCGATCTCGATTGCAGTAGTGGTTGGCTTGAAGGACCCAACAAAGTTTATATACCATTCTTGGCATGTGGTGACTTAACCGGTTATGACTCAGACCGGTCTTACCCACTCCCTAGAGAAGCAGATGGATCATCATACCAGAGTTTGGACCCGATTCAACCTCCGATCGCACCGCCTTATAAACGAGCTCTTGAGCTCAAGAAAGCTTCAGCACAAAGCTTCAACTCTTGAAGAAGGTGATACCAAAAAAGAAAAAGGAACAAACTTTTCATTGGATTCTGTAGCCTGTCGTAATGATATATTCAGGGACCTACAATTTCTATAACGCTTAATGTTTTTGTTATGATGAGGTTATATTTTTTATAGAATAAGAGATTATATTATTACTTTTGTTTAATACTGCTAGGAAGAAATCAAAT
>AT5G01230.1
GAATCGGTTTTTGTTCTCTCACACAGTCTTCTTCACTTGGCTCTACCTTGAATTTCTACTTTGGTGCTACTCTTCTTCACATACCTAGCTGCTGTATACTATACGTGAACCAACTCCGTATTCTACTTTAGAGGCCATGGGAAAAGCTTCTCGAGACAAAAGGGATATCTATTATCGTAAAGCTAAAGAAGAAGGATGGCGTGCAAGAAGTGCTTTTAAGCTTCTTCAGATTGATGAAGAATTTAATATTTTTGAAGGTGTGAAGAGGGTCGTAGATTTATGTGCTGCACCTGGTAGCTGGAGTCAGAGTGGGAGGAGTTAAATATGGTAAACAGAAGATGATAAGCATTGGGAAATTGAGTTGAGAGAGCAGGGATGCTGTAAAATTAATCTCTGAAGTTCTTTGTTTGGTTGATCCTCGGTTCCCAGTGGAAAAGTTAAAGAGAAACACGTTTTGAATTTTATCAGTGCACTGCATTTGTAGGTCTTGAGTCGTCAATTATATCTTCCTGCAAAGTCCTCAGCTGAGTCAAAAGATGGGGATCTTCCTCTTATAGTAGCCATCGATTTGCAGCCTATGGCTCCAATTGAAGGTGTCATCCAGGTTCAAGGGGACATAACTAATGCTCGGACTGCTGAAGTGGTCATTAGACACTTTGACGGCTGCAAAGCGGACCTGGTTGTCTGTGATGGTGCTCCAGATGGTAAAACAGTAGATAAAGTGTCTGTCTCGCCGTTCAATATATACGTTATGCTATAAAAAACGCCTTTTACAATTTGGTTTGCAGTTACTGGTTTGCATGACATGGATGAATTTGTCCAGTCCCAACTCATACTAGCAGGATTAACGATTGTAACTCATATTCTTAAAGAAGGTGGAAAATTTATTGCAAAGATATTCCGTGGAAAAGATACAAGTCTCTTGTACTGTCAACTGAAATTGTTTTTCCCAACCGTAACTTTTGCGAAACCGAAAAGCAGCCGCAATTCAAGTATAGAGGCTTTTGCAGTCTGCGAGAATTACTCTCCGCCAGAAGGATTTAACCCGAGAGATCTGCATCGTCTCTTGGAGAAAGTCGGAAGCCCTTCAGGTGGAAGCGATCTCGATTGCAGTAGTGGTTGGCTTGAAGGACCCAACAAAGTTTATATACCATTCTTGGCATGTGGTGACTTAACCGGTTATGACTCAGACCGGTCTTACCCACTCCCTAGAGAAGCAGATGGATCATCATACCAGAGTTTGGACCCGATTCAACCTCCGATCGCACCGCCTTATAAACGAGCTCTTGAGCTCAAGAAAGCTTCAGCACAAAGCTTCAACTCTTGAAGAAGGTGATACCAAAAAAGAAAAAGGAACAAACTTTTCATTGGATTCTGTAGCCTGTCGTAATGATATATTCAGGGACCTACAATTTCTATAACGCTTAATGTTTTTGTTATGATGAGGTTATATTTTTTATAGAATAAGAGATTATATTATTACTTTTGTTTAATACTGCTAGGAAGAAATCAAAT

CDS Sequence

Protein Sequence