Gene Details:
- Gene ID: AT4G40090
- Gene Symbol: AGP3
- Gene Name: arabinogalactan protein 3
- Description: arabinogalactan protein 3;(source:Araport11)
- TAIR Accession: locus:2140099
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0000256 — root hair cell — célula del pelo de la raíz (Spanish, exact), 根毛細胞 (Japanese, exact)
- PO:0000262 — trichoblast — tricoblasto (Spanish, exact), 根毛形成細胞、トリコブラスト (Japanese, exact), hair cell (related)
Gene Ontology:
- GO:0005886 — located in — plasma membrane
- GO:0007275 — acts upstream of or within — multicellular organism development
Function-related keywords:
Literature:
- Using genomic resources to guide research directions. The arabinogalactan protein gene family as a test case. DOI: 10.1104/pp.003459 ; PMID: 12177459
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures. DOI: 10.1104/pp.104.039370 ; PMID: 15235117
- Detoxification and transcriptome response in Arabidopsis seedlings exposed to the allelochemical benzoxazolin-2(3H)-one. DOI: 10.1074/jbc.M500694200 ; PMID: 15824099
- Expression of arabinogalactan protein genes in pollen tubes of Arabidopsis thaliana. DOI: 10.1007/s00425-005-0137-4 ; PMID: 16228244
- Integration of Arabidopsis thaliana stress-related transcript profiles, promoter structures, and cell-specific expression. DOI: 10.1186/gb-2007-8-4-r49 ; PMID: 17408486
- Arabidopsis female gametophyte gene expression map reveals similarities between plant and animal gametes. DOI: 10.1016/j.cub.2010.01.051 ; PMID: 20226671
- A gene regulatory network for root epidermis cell differentiation in Arabidopsis. DOI: 10.1371/journal.pgen.1002446 ; PMID: 22253603
- γ-Aminobutyric acid transaminase deficiency impairs central carbon metabolism and leads to cell wall defects during salt stress in Arabidopsis roots. DOI: 10.1111/pce.12033 ; PMID: 23148892
- The classical arabinogalactan protein gene family of arabidopsis. DOI: 10.1105/tpc.12.9.1751 ; PMID: 11006345
- Using genomic resources to guide research directions. The arabinogalactan protein gene family as a test case. DOI: 10.1104/pp.003459 ; PMID: 12177459
Sequences:
cDNA Sequence
- >AT4G40090.1
AATAAGCCATGTATATCTCTATGTGCCTGCATGTTTAAAGAGTCTGAAAGATCAAAATAAAATATACATCTTCTTAGCTATATATTAAGAACACATTTTCCTTCATTTATCCACCACCAACAAAAGACAAGAGTTTTCTCAGGTTTCTATCTCTCTCGTCAAACACAACGAAAGACATTGAAACTGAGAGAAATGGCTCTTAAGACATTGCAAGCTCTGATCTTTCTTGGTCTATTTGCCGCCTCATGTCTAGCTCAAGCTCCGGCTCCGGCACCTATCACGTTTCTCCCTCCGGTAGAGTCTCCTTCTCCAGTTGTTACACCAACTGCAGAACCACCGGCTCCCGTTGCTTCACCCCCTATTCCAGCCAACGAACCCACTCCGGTTCCAACAACTCCACCAACCGTCTCACCCCCGACCACGTCGCCCACAACTTCCCCTGTCGCTTCTCCTCCTAAACCATATGCTTTGGCTCCAGGCCCATCAGGTCCAACACCAGCTCCGGCCCCCGCTCCTAGAGCAGACGGGCCGGTAGCTGACTCAGCATTGACTAACAAAGCTTTCCTTGTTAGCACAGTCATTGCCGGAGCCTTGTACGCCGTTTTGGCTTAAAGAGTGCCTTGCGTATTACTCTATCATTCTCTCTCTCTCACTCTCCTTTGTTTTTTCTTATCATGATTTGTTTGAGAGATCTCTCTGTTTTTCCCTAATACATTTCGTCCTCTTTGTTGTTGTTTTCTTTTTGGGATCTTTTTGATATTTGTATAACTTTGATTGGACCATGGGATTAAACCTGAGGGAAGAAGTTCTGATTGTAATTTTCTTCATTATTTTTTTAATTAATAAAGTCTTGTTTAATATAGTTGCATT
CDS Sequence
Protein Sequence