Gene Details:

• Gene ID: AT4G40060
• Gene Symbol: ATHB-16, ATHB16, HB16
• Gene Name: homeobox protein 16, homeobox protein 16
• Description: homeobox protein 16;(source:Araport11)
• TAIR Accession: locus:2140055
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT4G40060.1

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
• PO:0009001  — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009047  — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)

Gene Ontology:

• GO:0045893  — involved in — positive regulation of DNA-templated transcription
• GO:0045893  — acts upstream of or within — positive regulation of DNA-templated transcription
• GO:0043565  — enables — sequence-specific DNA binding
• GO:0048573  — acts upstream of or within — photoperiodism, flowering
• GO:0030308  — acts upstream of or within — negative regulation of cell growth
• GO:0003700  — enables — DNA-binding transcription factor activity
• GO:0000981  — enables — DNA-binding transcription factor activity, RNA polymerase II-specific
• GO:0048510  — acts upstream of or within — regulation of timing of transition from vegetative to reproductive phase
• GO:0005634  — located in — nucleus
• GO:0009637  — acts upstream of or within — response to blue light
• GO:0000976  — enables — transcription cis-regulatory region binding
• GO:0005634  — is active in — nucleus

Function-related keywords:

• shoot axis apex ,  leaf lamina base ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  pollen ,  fruit ,  root ,  vascular leaf ,  flower ,  stem

Literature:

• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro.   DOI:  10.1023/a:1006423324025 ;  PMID:  11247607
• Gibberellin biosynthesis and response during Arabidopsis seed germination.   DOI:  10.1105/tpc.011650 ;  PMID:  12837949
• Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome.   DOI:  10.1104/pp.103.028241 ;  PMID:  14500793
• Transcriptional regulation of secondary growth in Arabidopsis thaliana.   DOI:  10.1093/jxb/erg304 ;  PMID:  14585825
• Homeodomain leucine zipper class I genes in Arabidopsis. Expression patterns and phylogenetic relationships.   DOI:  10.1104/pp.105.063461 ;  PMID:  16055682
• Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.   DOI:  10.1186/1471-2229-13-229 ;  PMID:  24377444
• Transcriptional regulation of nitrogen-associated metabolism and growth.   DOI:  10.1038/s41586-018-0656-3 ;  PMID:  30356219
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro.   DOI:  10.1023/a:1006423324025 ;  PMID:  11247607
• Homeodomain leucine zipper class I genes in Arabidopsis. Expression patterns and phylogenetic relationships.   DOI:  10.1104/pp.105.063461 ;  PMID:  16055682

Sequences: