Gene Details:
- Gene ID: AT4G32400
- Gene Symbol: ATBT1, BR1, EMB104, EMB42, SHS1, SHS1
- Gene Name: ARABIDOPSIS THALIANA BRITTLE 1, , EMBRYO DEFECTIVE 104, EMBRYO DEFECTIVE 42, SODIUM HYPERSENSITIVE 1, suppressor of high stearate content 1
- Description: Mitochondrial substrate carrier family protein;(source:Araport11)
- TAIR Accession: locus:2127851
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000025 — root tip — punta de la raíz (Spanish, exact), 根端 (Japanese, exact)
- PO:0009066 — anther — antera (Spanish, exact), 半葯,花粉のう (Japanese, exact), Poaceae anther (narrow), Zea anther (narrow)
Gene Ontology:
- GO:0006862 — acts upstream of or within — nucleotide transport
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0009941 — located in — chloroplast envelope
Germplasm Phenotype:
- CS84639 — developmental arrest of mutant embryos occurs variable at cotyledon stage, monocotyledonous; white to pale yellow-green seeds; white to pale yellow-green embryo; 23% mutant; 54.3% aborted seeds in top half of silique.
- CS84640 — developmental arrest of mutant embryos occurs at globular stage, distorted cotyledons (emb42); white to green seeds; white to green embryo; 25.5% mutant.
- SALK_078655_bt1 — Severely reduced germination in about 25% of seeds (presumptive homozygotes). Homozygotes when recovered are slow growing with abnormal flowers and siliques and are generally not fertile.
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , root tip , anther
Literature:
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Genomic and proteomic analysis of mitochondrial carrier proteins in Arabidopsis. DOI: 10.1104/pp.009985 ; PMID: 12586869
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- The growing family of mitochondrial carriers in Arabidopsis. DOI: 10.1016/j.tplants.2004.01.007 ; PMID: 15003237
- Folate metabolism in plants: an Arabidopsis homolog of the mammalian mitochondrial folate transporter mediates folate import into chloroplasts. DOI: 10.1074/jbc.M506045200 ; PMID: 16055441
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Synteny conservation between the Prunus genome and both the present and ancestral Arabidopsis genomes. DOI: 10.1186/1471-2164-7-81 ; PMID: 16615871
- Natural variation for carbohydrate content in Arabidopsis. Interaction with complex traits dissected by quantitative genetics. DOI: 10.1104/pp.106.082396 ; PMID: 16798941
- Host origin of plastid solute transporters in the first photosynthetic eukaryotes. DOI: 10.1186/gb-2007-8-10-r212 ; PMID: 17919328
- Integrating the genetic and physical maps of Arabidopsis thaliana: identification of mapped alleles of cloned essential (EMB) genes. DOI: 10.1371/journal.pone.0007386 ; PMID: 19812694
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Sequences:
cDNA Sequence
- >AT4G32400.1
CTGGATTGAGTTTCGGTTAAAGGTTTGGTCACACGTGAAAACTACAAAAACCGAGACTTCTTATACGGCTCTACTACATTTGCTTGTCGGCAATTATTTCGTGGATTTGCATTTCCCAATTCTAGAAAATAATTGAATATCTTAACAATAAAATATAAAACTCTTTTTAATTTTAGTTTCAAAGAAAATAAAAAAAAATCAAAGCGCCGCAGTCGACGTCCCACTGACCTACCTACCAACCCACCCAAAAAGGGCAAGAAAACTAGCAGACTGGTTAAAAGTAAAACCCTAAAATCTCAACGAAAGGGACGACCAATTGTTCGACGATTGGTCATGGGGAAAACCGGAATCCAATTGTTCGACGATTCGAGGAATGGGTTTTTCTCCGTTTCCGATTTAGGATTCGATTCGAGCCTAAACAGCTCTAATTACCACCCAATTGGTGGGTTATTCGCCAGCGTTAATCAGACTAATCCATTCGCATCCCTCTCGTCCTCGGATCTTTCCAACAGAGGCAACAACAGCTTCTCTACCCAGCTCAATGATCTCTACACCAAGTATATGCCGGGAAAAGAGGAGGAGGAAGAAGTAGTTAATGGCGAGAAGAGGAAGAGGAAGAAGAAAGGTGGGCTCACACTGAAGATTAAGATCGCTAATCCTTCGTTGCGGCGGCTATTAAGCGGAGCAGTAGCTGGAGCGGTGTCGAGAACGGTGGTTGCGCCGTTGGAGACAATCAGGACGCATCTAATGGTGGGAAGTGGAGGAAACTCCAGCACTGAAGTGTTCAGTGATATCATGAAGCATGAAGGTTGGACTGGTCTCTTCAGGGGCAATTTGGTCAATGTCATTCGTGTTGCACCTGCTCGAGCCGTCGAGCTTTTTGTATTCGAGACCGTAAACAAGAAATTGTCGCCGCCACATGGACAAGAATCGAAAATCCCAATTCCAGCTTCTTTACTGGCTGGTGCCTGTGCTGGAGTTAGCCAGACACTCTTGACATACCCTCTTGAACTAGTCAAGACTCGCCTTACAATTCAGAGAGGTGTTTACAAAGGGATTTTTGATGCGTTTCTCAAAATCATACGCGAGGAAGGACCCACAGAACTCTACAGGGGTCTTGCTCCTAGCCTTATTGGAGTTGTTCCATACGCAGCTACAAATTACTTTGCATATGATTCTTTGAGAAAAGCATACCGGAGTTTTTCAAAGCAGGAGAAGATTGGAAACATTGAGACTCTTTTGATAGGTTCTTTAGCAGGTGCACTATCGAGCACTGCAACTTTCCCTCTTGAAGTGGCCCGGAAGCATATGCAGGTGGGAGCTGTTAGCGGGAGGGTTGTGTACAAGAACATGTTGCACGCTCTGGTGACCATACTTGAGCATGAAGGTATTCTCGGTTGGTACAAAGGGCTTGGACCGAGTTGCTTGAAGTTGGTTCCTGCTGCTGGAATCTCCTTCATGTGTTATGAAGCTTGCAAGAAGATACTCATCGAGAACAACCAAGAAGCTTGATTTTGGAATTGTATGGATTCGTGGCAAATTTTAAGGATTGATCAGAGAAACACATTGTGGATACTAATTGGGTTCATTTTACACCACTTGAGATTTCACAAATTAGTATTGAGGGGGGATTAAAAGATTCACTCTACCTTTTTGTTTGAACTTTACGTTTTCAATTTTTGATTGATCTGATTCTGATTCAAATAAGAGTTTACACAATATCTCTTCAAATATGTAACTTTACTGATCAAGTCCCATAATGACAAAGATTTCGTTAAAAGTTCAAAAAAA
CDS Sequence
Protein Sequence