Gene Details:
- Gene ID: AT4G32300
- Gene Symbol: SD2-5
- Gene Name: S-domain-2 5
- Description: S-domain-2 5;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- The transcriptional innate immune response to flg22. Interplay and overlap with Avr gene-dependent defense responses and bacterial pathogenesis. DOI: 10.1104/pp.103.036749 ; PMID: 15181213
- Interactions between the S-domain receptor kinases and AtPUB-ARM E3 ubiquitin ligases suggest a conserved signaling pathway in Arabidopsis. DOI: 10.1104/pp.108.123380 ; PMID: 18552232
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. DOI: 10.1016/j.phytochem.2011.02.029 ; PMID: 21477822
- Genome-Wide Screening for Lectin Motifs in Arabidopsis thaliana. DOI: 10.3835/plantgenome2017.02.0010 ; PMID: 28724081
- Classification and phylogenetic analyses of the Arabidopsis and tomato G-type lectin receptor kinases. DOI: 10.1186/s12864-018-4606-0 ; PMID: 29625550
- In silico analysis and expression profiling of S-domain receptor-like kinases (SD-RLKs) under different abiotic stresses in Arabidopsis thaliana. DOI: 10.1186/s12864-021-08133-9 ; PMID: 34772363
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
Sequences:
cDNA Sequence
- >AT4G32300.1
AAGACACTCGCAGCATCTCTCTACTTCTCTCTCTCTCTGTTTCAACCCCTCTTGTCGTCTATCTCCATCAAAAAGACCAAAATCAAACATCATTGAATGTTAGACAGAGAGGCAAAAACTAATCAAAGTGTTTCTAATCCCTGAAAATAAGCCCACTTCTTCTATTTTCCTCATTTCAGTTTCTGGGTTTTAATCGATCTCCCCCTTTCTCACCCTTCCGTCTGAATTCCGGTCTGCAATCGTCGGAAAGTTTTGGACTTTACACCAACGCCAAAGCGAGTTCTTGTTTCTCTGTTTGCTTCTCTAGGACCAATCAGTTTCCATTTACAGATGCGTACTATTCACCTGTCAGAGCTCTGAGATTTGTCTTTTTGCATCTCTCTGAATATTTCTCTTTTCTCAGATCCATTGACCTCATCCACATACATAAAGTTTAGGTATTTTTAAAAGGGTTCAATTCTGGGGTTTACCGGAATTTCATCATCTTTGAAGACCATGAGAGGCGTCTTCATCGTCATCGTAACGTGTCTGGTTTTCTTACCGGATCCTCTACGTGCCGGTGTAGCGTCCATCGGGAGCATCACTCCAGGTTTTGGAGGATCTCAGATGAATTACATCAACAACGATGGTATCTTCCTCGAATCCAACAACTCAGCCTTCGGTTTCGGTTTCGTAACTACACAAGATTCCGTTACTCTGTTCACACTCAGTATCATCCACAAGAGCAGCACGAAACTGATCTGGTCCGCGAACAGAGCTTCCCCTGTTTCCAATTCCGACAAGTTTGTGTTCGATGACAACGGAAATGTGGTGATGGAAGGAACTGAGGTTTGGAGATTGGATAATTCAGGCAAAAACGCTTCAAGAATCGAGCTGCGTGACTCCGGGAATCTCGTTGTTGTTTCCGTTGACGGAACTTCGATCTGGGAGAGTTTTGATCATCCGACAGATACTCTGATCACGAATCAAGCTTTCAAAGAAGGCATGAAGCTCACTAGCAGTCCTTCTTCGAGCAACATGACTTATGCCCTTGAGATCAAATCAGGAGATATGGTTTTATCTGTTAACAGCTTAACCCCTCAAGTGTATTGGTCAATGGCAAATGCCAGAGAGAGGATCATCAACAAAGATGGCGGCGTAGTGACTTCATCGTCTCTCCTTGGGAATTCATGGCGGTTCTTTGATCAGAAACAGGTTTTGTTGTGGCAGTTTGTATTCTCAGACAATAAAGATGATAACACAACTTGGATCGCTGTTTTGGGAAACAACGGTGTGATCTCTTTTTCTAATCTTGGAAGCGGAGCATCTGCTGCCGATTCTTCGACTAAAATACCTAGCGATCTGTGCGGAACACCTGAGCCTTGCGGGCCTTACTATGTCTGCTCGGGTTCTAAAGTGTGTGGATGTGTGTCCGGGTTGTCTCGGGCTCGGTCTGATTGCAAAACCGGGATTACTTCTCCCTGTAAGAAAACCAAGGATAATGCAACATTGCCTTTGCAGCTAGTAAGTGCTGGAGACGGTGTAGACTATTTCGCTCTTGGGTATGCTCCTCCGTTCTCCAAGAAAACTGATCTTGATAGCTGTAAAGAGTTCTGCCACAACAATTGCTCGTGCCTTGGTCTTTTCTTCCAGAACAGTTCTGGTAATTGCTTCTTGTTTGATTATATTGGAAGCTTTAAAACCTCTGGCAATGGAGGCTCTGGGTTTGTGTCTTACATCAAGATCGCAAGTACTGGTTCTGGAGGTGGAGATAACGGAGAAGATGATGGGAAACATTTTCCTTATGTAGTGATTATTGTCGTGGTAACAGTTTTTATCATCGCTGTTTTGATCTTTGTGGCCTTCCGGATTCATAAGAGAAAGAAAATGATTTTGGAGGCTCCTCAAGAGAGTTCAGAAGAAGATAACTTCTTGGAGAACTTATCCGGGATGCCTATTCGGTTCGCTTACAAAGATCTTCAGTCAGCGACGAATAACTTCTCGGTGAAGTTAGGTCAAGGAGGGTTTGGATCGGTCTATGAAGGTACTTTACCAGATGGTTCTCGTCTAGCTGTGAAGAAACTTGAAGGAATCGGTCAAGGGAAGAAAGAATTCAGAGCCGAGGTTAGTATAATCGGAAGTATTCATCATCTGCACTTGGTGCGGCTAAGAGGATTCTGCGCAGAAGGGGCTCATAGGCTGCTCGCATACGAGTTCTTATCCAAAGGTTCGTTGGAGAGATGGATATTTAGGAAAAAGGATGGCGATGTTCTTCTAGATTGGGACACAAGATTTAACATAGCACTCGGAACAGCCAAAGGTTTAGCGTATCTACATGAAGATTGTGATGCAAGGATTGTTCACTGCGATATAAAACCCGAGAACATCCTATTAGACGATAACTTCAATGCCAAGGTATCCGATTTCGGACTGGCGAAGCTCATGACCCGCGAACAAAGCCATGTCTTCACAACAATGCGCGGGACAAGAGGCTACTTGGCTCCAGAATGGATCACAAACTATGCGATATCAGAGAAGAGTGATGTTTACAGCTACGGAATGGTGTTGCTAGAGTTAATAGGAGGAAGAAAGAACTATGATCCATCAGAAACTTCGGAGAAATGCCATTTTCCTTCTTTTGCTTTCAAGAAGATGGAAGAAGGGAAGCTTATGGATATTGTCGATGGGAAGATGAAGAATGTTGATGTGACTGACGAAAGGGTTCAAAGGGCTATGAAAACCGCACTTTGGTGTATACAAGAAGATATGCAAACGAGACCCTCGATGAGCAAAGTTGTTCAAATGCTTGAAGGTGTTTTTCCGGTGGTCCAGCCACCTAGTTCTTCCACTATGGGATCGAGACTTTACTCAAGCTTCTTTAAGTCCATCAGCGAGGACGGCGGTGCTACTACGTCATCTGGACCGTCCGATTGTAACAGTGAGAATTATCTCTCCGCCGTGAGACTCTCCGGTCCGAGATAGCAATCTTTTTAGCCAATTTTTAGTATCTTATATAATAGGTTTTTGGCTCACCATGTTTTGTTGTATATTGTTTTTGTGTTACATCTTAAAAGAATAGCCATCACTCAGTTTTGTAACGTTCCGAGATCAATTATTTCATAGATTACCCGTCGTTTTTCTTAA
CDS Sequence
Protein Sequence