Information report for AT4G31700
Gene Details
|
|
Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- SALK_048825 — Delayed leaf development.
- SALK_107209C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:no change,osmotic stress:decreased,salt stress:decreased,ABA:no change,hypoxia:no change.
Functional Keywords
Literature and News
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Differential contributions of ribosomal protein genes to Arabidopsis thaliana leaf development. DOI: 10.1111/j.1365-313X.2010.04457.x ; PMID: 21251100
- Target of rapamycin signaling regulates metabolism, growth, and life span in Arabidopsis. DOI: 10.1105/tpc.112.107144 ; PMID: 23275579
- Ribosomal protein S6, a target of rapamycin, is involved in the regulation of rRNA genes by possible epigenetic changes in Arabidopsis. DOI: 10.1074/jbc.M113.515015 ; PMID: 24302738
- Arabidopsis thaliana homeobox 12 (ATHB12), a homeodomain-leucine zipper protein, regulates leaf growth by promoting cell expansion and endoreduplication. DOI: 10.1111/nph.12998 ; PMID: 25187356
- Dosage Sensitivity of RPL9 and Concerted Evolution of Ribosomal Protein Genes in Plants. DOI: 10.3389/fpls.2015.01102 ; PMID: 26734020
- The Arabidopsis TOR Kinase Specifically Regulates the Expression of Nuclear Genes Coding for Plastidic Ribosomal Proteins and the Phosphorylation of the Cytosolic Ribosomal Protein S6. DOI: 10.3389/fpls.2016.01611 ; PMID: 27877176
- Balance between Cytosolic and Chloroplast Translation Affects Leaf Variegation. DOI: 10.1104/pp.17.00673 ; PMID: 29142022
- TOR and RPS6 transmit light signals to enhance protein translation in deetiolating Arabidopsis seedlings. DOI: 10.1073/pnas.1809526115 ; PMID: 30482859
- Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. DOI: 10.1038/s41477-019-0378-z ; PMID: 30833711
- Overexpression of the Selective Autophagy Cargo Receptor NBR1 Modifies Plant Response to Sulfur Deficit. DOI: 10.3390/cells9030669 ; PMID: 32164165
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
Gene Resources
- UniProt: A0A654FUP3
- EMBL: CACRSJ010000109, CACSHJ010000095
- AlphaFoldDB: A0A654FUP3
- EnsemblPlants: AT4G31700.1
- Gramene: AT4G31700.1
- KEGG: ath:AT4G31700
- Orthologous matrix: FQEQIVK
- ExpressionAtlas: AT4G31700
- InterPro: IPR001377, IPR014401
- PANTHER: PTHR11502
- Gene3D: 1.20.5.2650
- OrthoDB: A0A654FUP3
- SWISS-MODEL: A0A654FUP3
Sequences
cDNA Sequence
- >AT4G31700.1
GAAAACGGCCCATATAAATCCACCAAACGAATCTTCTCTCTTGGTATAAATATGCTGTCTTGCGTTACAGAGAAACCCTAGACGTCGAAGATGAAGTTCAACGTTGCGAATCCAACTACTGGATGCCAGAAGAAGCTCGAGATCGACGATGACCAGAAACTACGTGCGTTTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGCTTCACCGAGGAACTCCTTGCTTCAGAGGACATGGAAGGAGAACTGGTGAGAGGAGAAGAAAGTCTGTTCGTGGTTGCATTGTGAGCCCTGATCTCTCTGTTCTGAACCTTGTCATTGTGAAGAAGGGTGAGAACGATCTTCCTGGGCTTACCGATACTGAGAAGCCAAGAATGAGAGGACCAAAGAGAGCCTCCAAGATCCGTAAACTGTTTAACCTCAAGAAGGAAGATGATGTCAGGACCTATGTCAACACTTACCGCCGCAAGTTCACAAACAAGAAGGGCAAGGAAGTTAGCAAAGCCCCTAAGATCCAGAGGCTTGTGACCCCATTGACTCTTCAGAGGAAGAGAGCTAGAATTGCTGACAAGAAGAAGAAAATTGCTAAGGCTAATTCTGATGCTGCTGATTACCAGAAGCTTCTCGCCTCGAGGTTGAAGGAACAGCGTGACAGGAGGAGTGAGAGTTTGGCAAAGAAGAGGTCGAGACTCTCTTCTGCTGCTGCCAAGCCCTCTGTCACAGCTTAAAAAAGCTTGAGAATCAAATCAAAGATGTCACCTTTCTAGTTTTGTTCTCTTTTCTTCTCCGGCTATTAAAAAGTTAGTTCGAGTTCATATTCAGCTGTTTTTGTTCCAAGACATGGGTACACAATCGCTTTGGGCTTGTTTCATGATTTATGCTTTTAGTTGAAGACCATTTTAAACTCAATTTTTATTGCTTATCTTTCTCAGTTTTTGATCAAAGCGTTTCTCCATTGAAAACCATTTTAATCACCTGTTTCAATCATACATAATGTTAAACACATGTACTGGCGATTACAATAGGTATATATTTTGACTGAAATTTATGGAGCA - >AT4G31700.2
GAAAACGGCCCATATAAATCCACCAAACGAATCTTCTCTCTTGGTATAAATATGCTGTCTTGCGTTACAGAGAAACCCTAGACGTCGAAGATGAAGTTCAACGTTGCGAATCCAACTACTGGATGCCAGAAGAAGCTCGAGATCGACGATGACCAGAAACTACGTGCGTTTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGCTTCACCGAGGAACTCCTTGCTTCAGAGGACATGGAAGGAGAACTGGTGAGAGGAGAAGAAAGTCTGTTCGTGGTTGCATTGTGAGCCCTGATCTCTCTGTTCTGAACCTTGTCATTGTGAAGAAGGGTGAGAACGATCTTCCTGGGCTTACCGATACTGAGAAGCCAAGAATGAGAGGACCAAAGAGAGCCTCCAAGATCCGTAAACTGTTTAACCTCAAGAAGGAAGATGATGTCAGGACCTATGTCAACACTTACCGCCGCAAGTTCACAAACAAGAAGGGCAAGGAAGTTAGCAAAGCCCCTAAGATCCAGAGGCTTGTGACCCCATTGACTCTTCAGAGGAAGAGAGCTAGAATTGCTGACAAGAAGAAGAAAATTGCTAAGGCTAATTCTGATGCTGCTGATTACCAGAAGCTTCTCGCCTCGAGGTTGAAGGAACAGCGTGACAGGAGGAGTGAGAGTTTGGCAAAGAAGAGGTCGAGACTCTCTTCTGCTGCTGCCAAGCCCTCTGTCACAGCTTAAAAAAGCTTGAGAATCAAATCAAAGATGTCACCTTTCTAGTTTTGTTCTCTTTTCTTCTCCGGCTATTAAAAAGTTAGTTCGAGTTCATATTCAGCTGTTTTTGTTCCAAGACATGGGTACACAATCGCTTTGGGCTTGTTTCATGATTTATGCTTTTAGTTGAAGACCATTTTAAACTCAATTTTTATTGCTTATCTTTCTCAGTTTTTGATCAAAGCGTTTCTCCATTGAAAACCATTTTAATCACCTGTTTCAATCATACATAATGTTAAACACATGTACTGGCGATTACAATAGGTATATATTTTGACTGAAATTTATGGAGCA
CDS Sequence
Protein Sequence