Information report for AT4G31550
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- The WRKY superfamily of plant transcription factors. DOI: 10.1016/s1360-1385(00)01600-9 ; PMID: 10785665
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Identification of unstable transcripts in Arabidopsis by cDNA microarray and specific clock-controlled genes. DOI: 10.1073/pnas.152204099 ; PMID: 12167669
- Full-length messenger RNA sequences greatly improve genome annotation. DOI: 10.1186/gb-2002-3-6-research0029 ; PMID: 12093376
- The transcriptional innate immune response to flg22. Interplay and overlap with Avr gene-dependent defense responses and bacterial pathogenesis. DOI: 10.1104/pp.103.036749 ; PMID: 15181213
- Transcriptional profiling by cDNA-AFLP and microarray analysis reveals novel insights into the early response to ethylene in Arabidopsis. DOI: 10.1111/j.1365-313X.2004.02156.x ; PMID: 15272873
- A two-step strategy for detecting differential gene expression in cDNA microarray data. DOI: 10.1007/s00294-004-0551-3 ; PMID: 15688252
- WRKY group IId transcription factors interact with calmodulin. DOI: 10.1016/j.febslet.2005.01.057 ; PMID: 15733871
- Genome-wide transcriptional analysis of the Arabidopsis thaliana interaction with the plant pathogen Pseudomonas syringae pv. tomato DC3000 and the human pathogen Escherichia coli O157:H7. DOI: 10.1111/j.1365-313X.2006.02725.x ; PMID: 16553894
- The transcription factors WRKY11 and WRKY17 act as negative regulators of basal resistance in Arabidopsis thaliana. DOI: 10.1105/tpc.106.044149 ; PMID: 17114354
- Integration of Arabidopsis thaliana stress-related transcript profiles, promoter structures, and cell-specific expression. DOI: 10.1186/gb-2007-8-4-r49 ; PMID: 17408486
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
- Dual regulation role of GH3.5 in salicylic acid and auxin signaling during Arabidopsis-Pseudomonas syringae interaction. DOI: 10.1104/pp.107.106021 ; PMID: 17704230
- The relationship of drought-related gene expression in Arabidopsis thaliana to hormonal and environmental factors. DOI: 10.1093/jxb/ern155 ; PMID: 18552355
- Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function. DOI: 10.1007/s11103-008-9353-1 ; PMID: 18523729
- DPI-ELISA: a fast and versatile method to specify the binding of plant transcription factors to DNA in vitro. DOI: 10.1186/1746-4811-6-25 ; PMID: 21108821
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- The beet cyst nematode Heterodera schachtii modulates the expression of WRKY transcription factors in syncytia to favour its development in Arabidopsis roots. DOI: 10.1371/journal.pone.0102360 ; PMID: 25033038
- Screening for protein-DNA interactions by automatable DNA-protein interaction ELISA. DOI: 10.1371/journal.pone.0075177 ; PMID: 24146751
- Promoter-based integration in plant defense regulation. DOI: 10.1104/pp.114.248716 ; PMID: 25352272
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell-Type Proliferation and Differentiation. DOI: 10.1105/tpc.15.00744 ; PMID: 27650334
- Establishment of Expression in the SHORTROOT-SCARECROW Transcriptional Cascade through Opposing Activities of Both Activators and Repressors. DOI: 10.1016/j.devcel.2016.09.031 ; PMID: 27923776
- Transcription factors WRKY11 and WRKY17 are involved in abiotic stress responses in Arabidopsis. DOI: 10.1016/j.jplph.2018.04.007 ; PMID: 29689430
- Branch-recombinant Gaussian processes for analysis of perturbations in biological time series. DOI: 10.1093/bioinformatics/bty603 ; PMID: 30423108
- WRKY7, -11 and -17 transcription factors are modulators of the bZIP28 branch of the unfolded protein response during PAMP-triggered immunity in Arabidopsis thaliana. DOI: 10.1016/j.plantsci.2018.09.019 ; PMID: 30466590
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- An LRR receptor kinase controls ABC transporter substrate preferences during plant growth-defense decisions. DOI: 10.1016/j.cub.2023.04.029 ; PMID: 37146609
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: A0A1P8B8D0
- EMBL: CP002687
- AlphaFoldDB: A0A1P8B8D0
- EnsemblPlants: AT4G31550.3
- Gramene: AT4G31550.3
- Orthologous matrix: LIRIMSH
- ExpressionAtlas: AT4G31550
- InterPro: IPR003657, IPR018872, IPR036576
- PANTHER: PTHR31282
- SUPFAM: SSF118290
- PROSITE: PS50811
- Gene3D: 2.20.25.80
- OrthoDB: A0A1P8B8D0
- SWISS-MODEL: A0A1P8B8D0
Sequences
cDNA Sequence
- >AT4G31550.3
CACGCATCCTTCTTCTTCTCTCTTCTCCATCACAACCATTTCTCTCTCTCGTCTTCGTCTTCTTCTTCTTCAACGTTCCTCTCCAAAATCCTCAGACCAAGAAATCATCATGGCCGTCGATCTAATGCGTTTCCCTAAGATAGATGATCAAACGGCTATTCAGGAAGCTGCATCGCAAGGTTTACAAAGTATGGAACATCTGATCCGTGTCCTCTCTAACCGTCCCGAACAACAACACAACGTTGACTGCTCCGAGATCACTGACTTCACCGTTTCTAAATTCAAAACCGTCATTTCTCTCCTTAACCGTACTGGTCACGCTCGGTTCAGACGCGGACCGGTTCACTCCACTTCCTCTGCCGCATCTCAGAAACTACAGAGTCAGATCGTTAAAAATACTCAACCTGAGGCTCCGATAGTGAGAACAACTACGAATCACCCTCAAATCGTTCCTCCACCGTCTAGTGTAACACTCGATTTCTCTAAACCAAGCATCTTCGGCACCAAAGCTAAGAGCGCCGAGCTGGAATTCTCCAAAGAAAACTTCAGTGTTTCTTTAAACTCCTCATTCATGTCGTCGGCGATAACCGGAGACGGCAGCGTCTCCAATGGAAAAATCTTCCTTGCTTCTGCTCCGTTGCAGCCTGTTAACTCTTCCGGAAAACCACCGTTGGCTGGTCATCCTTACAGAAAGAGATGTCTCGAGCATGAGCACTCAGAGAGTTTCTCCGGAAAAGTCTCCGGCTCCGCCTACGGAAAGTGCCATTGCAAGAAAAGGAAAAATCGGATGAAGAGAACCGTGAGAGTACCGGCGATAAGTGCAAAGATCGCCGATATTCCACCGGACGAATATTCGTGGAGGAAGTACGGACAAAAACCGATCAAGGGCTCACCACACCCACGGTAAATATCCTACACCCGTCTAATATCCACCGTTGGTATTTAATTTAATCGCGATCTAACGGTGTTTATTTGTTTTTTGCGATCCAGTGGTTACTACAAGTGCAGTACATTCAGAGGATGTCCAGCGAGGAAACACGTGGAACGAGCATTAGATGATCCAGCGATGCTTATTGTGACATACGAAGGAGAGCACCGTCATAACCAATCCGCGATGCAGGAGAATATTTCTTCTTCAGGCATTAATGATTTAGTGTTTGCCTCGGCTTGACTTTTTTTTGTACTATTTGTTTTTTGATTTTTTGAGTACTTTAGATGGATTGAAATTTGTAAATTTTTTTATTAAGAAATCAATTTAAATAGAGAAAAATTAGTGGTGGTGCAATGTTTTATACTATTGTTGTTGATGATTAGTAGATATGGGTATTAGGTAGAACCGTAGAGGTTATGAAATTAATTGCGCACCAAATGATATAGACTTATGTTCGTCATTTACTTTTCATTATTCATTGTTTTTTTCCTTAATTAATATAAATGACTTGGTGGC - >AT4G31550.2
CACGCATCCTTCTTCTTCTCTCTTCTCCATCACAACCATTTCTCTCTCTCGTCTTCGTCTTCTTCTTCTTCAACGTTCCTCTCCAAAATCCTCAGACCAAGAAATCATCATGGCCGTCGATCTAATGCGTTTCCCTAAGATAGATGATCAAACGGCTATTCAGGAAGCTGCATCGCAAGGTTTACAAAGTATGGAACATCTGATCCGTGTCCTCTCTAACCGTCCCGAACAACAACACAACGTTGACTGCTCCGAGATCACTGACTTCACCGTTTCTAAATTCAAAACCGTCATTTCTCTCCTTAACCGTACTGGTCACGCTCGGTTCAGACGCGGACCGGTTCACTCCACTTCCTCTGCCGCATCTCAGAAACTACAGAGTCAGATCGTTAAAAATACTCAACCTGAGGCTCCGATAGTGAGAACAACTACGAATCACCCTCAAATCGTTCCTCCACCGTCTAGTGTAACACTCGATTTCTCTAAACCAAGCATCTTCGGCACCAAAGCTAAGAGCGCCGAGCTGGAATTCTCCAAAGAAAACTTCAGTGTTTCTTTAAACTCCTCATTCATGTCGTCGGCGATAACCGGAGACGGCAGCGTCTCCAATGGAAAAATCTTCCTTGCTTCTGCTCCGTTGCAGCCTGTTAACTCTTCCGGAAAACCACCGTTGGCTGGTCATCCTTACAGAAAGAGATGTCTCGAGCATGAGCACTCAGAGAGTTTCTCCGGAAAAGTCTCCGGCTCCGCCTACGGAAAGTGCCATTGCAAGAAAAGGAAAAATCGGATGAAGAGAACCGTGAGAGTACCGGCGATAAGTGCAAAGATCGCCGATATTCCACCGGACGAATATTCGTGGAGGAAGTACGGACAAAAACCGATCAAGGGCTCACCACACCCACGGTAAATATCCTACACCCGTCTAATATCCACCGTTGGTATTTAATTTAATCGCGATCTAACGGTGTTTATTTGTTTTTTGCGATCCAGTGGTTACTACAAGTGCAGTACATTCAGAGGATGTCCAGCGAGGAAACACGTGGAACGAGCATTAGATGATCCAGCGATGCTTATTGTGACATACGAAGGAGAGCACCGTCATAACCAATCCGCGATGCAGGAGAATATTTCTTCTTCAGGCATTAATGATTTAGTGTTTGCCTCGGCTTGACTTTTTTTTGTACTATTTGTTTTTTGATTTTTTGAGTACTTTAGATGGATTGAAATTTGTAAATTTTTTTATTAAGAAATCAATTTAAATAGAGAAAAATTAGTGGTGGTGCAATGTTTTATACTATTGTTGTTGATGATTAGTAGATATGGGTATTAGGTAGAACCGTAGAGGTTATGAAATTAATTGCGCACCAAATGATATAGACTTATGTTCGTCATTTACTTTTCATTATTCATTGTTTTTTTCCTTAATTAATATAAATGACTTGGTGGC - >AT4G31550.1
CACGCATCCTTCTTCTTCTCTCTTCTCCATCACAACCATTTCTCTCTCTCGTCTTCGTCTTCTTCTTCTTCAACGTTCCTCTCCAAAATCCTCAGACCAAGAAATCATCATGGCCGTCGATCTAATGCGTTTCCCTAAGATAGATGATCAAACGGCTATTCAGGAAGCTGCATCGCAAGGTTTACAAAGTATGGAACATCTGATCCGTGTCCTCTCTAACCGTCCCGAACAACAACACAACGTTGACTGCTCCGAGATCACTGACTTCACCGTTTCTAAATTCAAAACCGTCATTTCTCTCCTTAACCGTACTGGTCACGCTCGGTTCAGACGCGGACCGGTTCACTCCACTTCCTCTGCCGCATCTCAGAAACTACAGAGTCAGATCGTTAAAAATACTCAACCTGAGGCTCCGATAGTGAGAACAACTACGAATCACCCTCAAATCGTTCCTCCACCGTCTAGTGTAACACTCGATTTCTCTAAACCAAGCATCTTCGGCACCAAAGCTAAGAGCGCCGAGCTGGAATTCTCCAAAGAAAACTTCAGTGTTTCTTTAAACTCCTCATTCATGTCGTCGGCGATAACCGGAGACGGCAGCGTCTCCAATGGAAAAATCTTCCTTGCTTCTGCTCCGTTGCAGCCTGTTAACTCTTCCGGAAAACCACCGTTGGCTGGTCATCCTTACAGAAAGAGATGTCTCGAGCATGAGCACTCAGAGAGTTTCTCCGGAAAAGTCTCCGGCTCCGCCTACGGAAAGTGCCATTGCAAGAAAAGGAAAAATCGGATGAAGAGAACCGTGAGAGTACCGGCGATAAGTGCAAAGATCGCCGATATTCCACCGGACGAATATTCGTGGAGGAAGTACGGACAAAAACCGATCAAGGGCTCACCACACCCACGGTAAATATCCTACACCCGTCTAATATCCACCGTTGGTATTTAATTTAATCGCGATCTAACGGTGTTTATTTGTTTTTTGCGATCCAGTGGTTACTACAAGTGCAGTACATTCAGAGGATGTCCAGCGAGGAAACACGTGGAACGAGCATTAGATGATCCAGCGATGCTTATTGTGACATACGAAGGAGAGCACCGTCATAACCAATCCGCGATGCAGGAGAATATTTCTTCTTCAGGCATTAATGATTTAGTGTTTGCCTCGGCTTGACTTTTTTTTGTACTATTTGTTTTTTGATTTTTTGAGTACTTTAGATGGATTGAAATTTGTAAATTTTTTTATTAAGAAATCAATTTAAATAGAGAAAAATTAGTGGTGGTGCAATGTTTTATACTATTGTTGTTGATGATTAGTAGATATGGGTATTAGGTAGAACCGTAGAGGTTATGAAATTAATTGCGCACCAAATGATATAGACTTATGTTCGTCATTTACTTTTCATTATTCATTGTTTTTTTCCTTAATTAATATAAATGACTTGGTGGC
CDS Sequence
Protein Sequence