Gene Details:
- Gene ID: AT4G31270
- Gene Symbol: HDP2, IDAP2
- Gene Name: Harbinger transposon-derived protein 2, IDM1-associated protein 2
- Description: sequence-specific DNA binding transcription factor;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Function-related keywords:
- shoot axis apex , plant embryo , vascular leaf , sepal , flower , inflorescence flower pedicel , petiole , hypocotyl , leaf apex , collective leaf structure
Literature:
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Retraction: 'A pair of transposon-derived proteins regulate active DNA demethylation in Arabidopsis'. DOI: 10.15252/embj.201694284 ; PMID: 27470001
- A pair of transposon-derived proteins function in a histone acetyltransferase complex for active DNA demethylation. DOI: 10.1038/cr.2016.147 ; PMID: 27934869
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Sequences:
cDNA Sequence
- >AT4G31270.1
ATCGTCTTGGAGCAAACTTCAAAGTGACTTGCCTGGCGTCGACGTGTCGTTTTCCAGAAGCAGTTTCCGGCGATCTGTTTAAGCCTTTTTGGATGGAGGAAGGAACTTCAGGTTCACGGAGAACACGGTCTCAAGTTGCTCCAGAATGGGCAGTCAAAGATTGTCTAGTCCTCGTGAATGAGATCGCTGCGGTTGAAGCCGATTGTTCGAATGCTTTATCTAGCTTCCAGAAATGGACAATGATCACAGAGAACTGCAACGCTTTGGATGTTAGCAGAAATCTAAACCAATGCAGGAGGAAATGGGATTCTTTGATGTCTGATTACAATCAGATCAAGAAGTGGGAATCTCAGTACCGAGGCACTGGTCGTTCCTATTGGTCCCTGAGTAGTGACAAGAGGAAGTTACTTAATCTCCCGGGGGATATCGATATCGAGCTTTTTGAAGCCATCAATGCGGTTGTGATGATCCAAGATGAAAAAGCTGGGACTGAATCTGATAGTGACCCTGAAGCGCAAGACGTTGTTGATCTCTCTGCTGAATTAGCTTTTGTAGGATCAAAAAGATCAAGACAGCGAACAATGGTCATGAAGGAGACAAAGAAAGAAGAGCCACGGACTAGCCGAGTTCAAGTAAACACTCGAGAGAAACCTATAACTACAAAAGCAACCCATCAGAACAAAACCATGGGAGAGAAGAAGCCGGTGGAAGATATGTCCACAGATGAAGAAGAAGATGAAACAATGAACATAGAAGAGGATGTAGAAGTGATGGAAGCGAAGCTAAGTTATAAAATTGACTTGATACATGCGATAGTCGGGAGAAATCTAGCAAAGGATAATGAAACAAAGGATGGTGTTAGTATGGACGACAAGTTGAAGTCTGTGAGACAGCAAGGAGACGAGCTCATCGGTTGTCTGAGTGAAATTGTTAGTACCCTTAATAGGCTTCATGAAGTTCCACAAGAAATCGAGTGATTTACAATGTGAATAAACTATCAGTTGTAAATGCTTAGCCATGAATCGTAATAATGTTGTAGACTTGTAGACTTTCAAAAGCTGTCTGTAATCTGTCAAGTAT
CDS Sequence
Protein Sequence