Gene Details:
- Gene ID: AT4G30800
- Gene Symbol: uS17y
- Gene Name: Ribosomal Protein uS17y
- Description: Nucleic acid-binding, OB-fold-like protein;(source:Araport11)
- TAIR Accession: locus:2126639
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Gene Ontology:
- GO:0005737 — located in — cytoplasm
- GO:0003729 — enables — mRNA binding
- GO:0005886 — located in — plasma membrane
- GO:0022627 — part of — cytosolic small ribosomal subunit
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0006412 — involved in — translation
- GO:0003735 — enables — structural constituent of ribosome
- GO:0009955 — acts upstream of or within — adaxial/abaxial pattern specification
- GO:0030154 — acts upstream of or within — cell differentiation
- GO:0022627 — located in — cytosolic small ribosomal subunit
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , guard cell
Literature:
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stress. DOI: 10.1104/pp.008532 ; PMID: 12481097
- Transcriptome profiling of the response of Arabidopsis suspension culture cells to Suc starvation. DOI: 10.1104/pp.104.044362 ; PMID: 15310832
- Arabidopsis response regulator, ARR22, ectopic expression of which results in phenotypes similar to the wol cytokinin-receptor mutant. DOI: 10.1093/pcp/pch128 ; PMID: 15356332
- Combinatorial microarray analysis revealing arabidopsis genes implicated in cytokinin responses through the His->Asp Phosphorelay circuitry. DOI: 10.1093/pcp/pci033 ; PMID: 15695462
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
Sequences:
cDNA Sequence
- >AT4G30800.1
TTCTAACTAGCCATCCAGTCTGGTTAGAAAGCAAAATTGTTTATTTTATTTTAGGTTCAGTTTTCAGATCGGTTTTCTAACACTGTTTTGGTTTGGTTCTCGTATCGGTTCAACCGGATTGGATAGTCATAAAGAATTTGAAGTCCTTAATTAAGCCCAAAACAAGTAGAGCCCATATATATACTAACAAAGCCGTGATTAGGGTTTTTGGTTTTCGTCAGAAGATTTCAAGGTTTAGGGTTTCTGCAATTCAACCATGGCAGAGCAGACGGAGAAGGCGTTTCTTAAGCAACCAAAAGTTTTCTTAAGCTCGAAGAAATCTGGTAAGGGAAAGAGGCCTGGTAAAGGAGGTAATCGTTTCTGGAAGAACATTGGCCTTGGTTTCAAAACTCCAAGAGAGGCTATTGAAGGAACATACATTGACCAGAAATGTCCCTTTACTGGTACGGTTTCAATCAGGGGTCGCATCTTGTCTGGAACTTGTCACAGTGCAAAGATGCAGAGGACGATCATTGTTCGTAGGGACTATCTTCATTTTGTGAAGAAGTATCGAAGATATGAGAAAAGACACTCAAACATTCCTGCTCATGTTTCCCCGTGCTTCCGTGTCAAAGAAGGAGATCGTGTTACCATTGGGCAATGCAGGCCATTGTCAAAGACGGTGAGGTTCAATGTCCTGAAGGTCATTCCGGCTGGAAGCTCTTCTATCGGGAAAAAAGCATTCACTGGAATGTAAAAGAGATTCAGATTTGTTGAAAAGGTGCGAACTAGTATTCTAAGAGTTTAGAATTTTTCTAGCAGAGTTATTGGATTCGTTTCTTAAGATCTATGATCAAAGGAAACCAGATTTTCTGTTTCATTTAGTGATTCAAGTATCAAGATATGTCTATGGTTATAGTTTTACTCCAATATATCTAGTCATGAGTTGCTATCTACTAGTCATGATTTCGATGAAAAGTGGAATTATGCTTTTGCTATCTTGATATTTATCTTTGTCTAATCGATATTTCTTGCT
CDS Sequence
Protein Sequence