Information report for AT4G30690
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0005737 — located in — cytoplasm
- GO:0009505 — located in — plant-type cell wall
- GO:0043022 — enables — ribosome binding
- GO:0005886 — located in — plasma membrane
- GO:0009507 — located in — chloroplast
- GO:0032790 — involved in — ribosome disassembly
- GO:0003729 — enables — mRNA binding
- GO:0003743 — enables — translation initiation factor activity
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics. DOI: 10.1002/pmic.200400882 ; PMID: 15593128
- Recent advances in plant cell wall proteomics. DOI: 10.1002/pmic.200700938 ; PMID: 18210371
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Translation initiation factor 3 families: what are their roles in regulating cyanobacterial and chloroplast gene expression? DOI: 10.1007/s11120-015-0074-4 ; PMID: 25630975
- Chloroplast Translation Initiation Factors Regulate Leaf Variegation and Development. DOI: 10.1104/pp.15.02040 ; PMID: 27535792
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics. DOI: 10.1002/pmic.200400882 ; PMID: 15593128
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A5S9XXB9
- EMBL: CACRSJ010000109, CACSHJ010000095, LR881469
- AlphaFoldDB: A0A5S9XXB9
- EnsemblPlants: AT4G30690.1
- Gramene: AT4G30690.1
- KEGG: ath:AT4G30690
- Orthologous matrix: RFLAITC
- ExpressionAtlas: AT4G30690
- InterPro: IPR001288, IPR019813, IPR019814
- PANTHER: PTHR10938, PTHR10938:SF0
- SUPFAM: SSF54364, SSF55200
- PROSITE: PS00938
- Gene3D: 3.10.20.80, 3.30.110.10
- OrthoDB: A0A5S9XXB9
- SWISS-MODEL: A0A5S9XXB9
Sequences
cDNA Sequence
- >AT4G30690.1
CTTCATTTAAAAATCTTTAAAGTATAGATTTTTTAATCTGATGTATCCCAATATATTATGGATAAGATAGATTTTTTTTTGTTCTTTTGTATTTAAATCGGATCATTCTAATTGGTGGAGAGACAGACTCTGGACTCTGAAGAAGCAAATGGCTGGGATCACCAGCACCGTTGGATTCAACGCCATTCTCGCCGGAGCCACCAAAACGGTGTCGCATCCTGTTAAATCTAAGCTCTTTGGTCTTCGACTCTGTGTACCCGAATTCTCAATTGTTTCTCTTTCCCCTTATCATCATCGCCGTTGTCCCGCCATCACTTGCCGTTACGGAGGCGGTGGTGGCGGAGGCTCTAGATTTCCCGGCGATAGGAGAGGTAGGCAGAAAGAATCCGAGGATGATGATTCGCTTGATATCTCAGCTATTAGGTCAGCCACTGTTAGGCTTATTGATGATCAGCAGAACATGATTGGTTTAGTTTCCAAAGAAGAAGCTGTTCGAAGAGCTGAAGATGCTGAGCTTGATCTGGTGATTCTTTCGCCGGATGCAGATCCTCCGGTTGTTAGAATGATGGATTACAGTAAATACAGATATGAGCAGCAAAAGAGGAAAAAGGAACAGCAGAAGAAAACTACTCGAATGGACTTGAAGGAGCTTAAAATGGGTTATAACATCGATCAGCATGATTATTCTGTACGCATGAGAGCAGCCCGGAAGTTCTTGCAAGACGGTGACAAGGTTAAAGTGATTGTGAACATGAAAGGCCGAGAAAACGAGTTCAGAAATATTGCTATTGAGCTCCTCAGACGTTTTCAGACTGAAATAGGAGAGCTTGGTACTGAGGAGAGCAAAAACTTTCGGGACAGAAATTTGTTTATTGTCTTGGTGCCAAACAAGGAAGTTATTCGGAAAGTGCAAGAACCACCCCCAAAAAAGAAGAAAAAGCCAGCGGATGATAAAGTTTCAGCAGCAAATATAACTGCAACACAAGATATATGATGCGGAATTGTCTGATGTAAAATGTTCTGTGACTTTGATAAATTTCTGTATAGTTTCTTTTTTAATATGCTTCTTGCATTTCCATGTAATTGTAACCATAGAAATAGATTATTTGAATGAAGATCTTCGTCAACTTTT - >AT4G30690.2
CTTCATTTAAAAATCTTTAAAGTATAGATTTTTTAATCTGATGTATCCCAATATATTATGGATAAGATAGATTTTTTTTTGTTCTTTTGTATTTAAATCGGATCATTCTAATTGGTGGAGAGACAGACTCTGGACTCTGAAGAAGCAAATGGCTGGGATCACCAGCACCGTTGGATTCAACGCCATTCTCGCCGGAGCCACCAAAACGGTGTCGCATCCTGTTAAATCTAAGCTCTTTGGTCTTCGACTCTGTGTACCCGAATTCTCAATTGTTTCTCTTTCCCCTTATCATCATCGCCGTTGTCCCGCCATCACTTGCCGTTACGGAGGCGGTGGTGGCGGAGGCTCTAGATTTCCCGGCGATAGGAGAGGTAGGCAGAAAGAATCCGAGGATGATGATTCGCTTGATATCTCAGCTATTAGGTCAGCCACTGTTAGGCTTATTGATGATCAGCAGAACATGATTGGTTTAGTTTCCAAAGAAGAAGCTGTTCGAAGAGCTGAAGATGCTGAGCTTGATCTGGTGATTCTTTCGCCGGATGCAGATCCTCCGGTTGTTAGAATGATGGATTACAGTAAATACAGATATGAGCAGCAAAAGAGGAAAAAGGAACAGCAGAAGAAAACTACTCGAATGGACTTGAAGGAGCTTAAAATGGGTTATAACATCGATCAGCATGATTATTCTGTACGCATGAGAGCAGCCCGGAAGTTCTTGCAAGACGGTGACAAGGTTAAAGTGATTGTGAACATGAAAGGCCGAGAAAACGAGTTCAGAAATATTGCTATTGAGCTCCTCAGACGTTTTCAGACTGAAATAGGAGAGCTTGGTACTGAGGAGAGCAAAAACTTTCGGGACAGAAATTTGTTTATTGTCTTGGTGCCAAACAAGGAAGTTATTCGGAAAGTGCAAGAACCACCCCCAAAAAAGAAGAAAAAGCCAGCGGATGATAAAGTTTCAGCAGCAAATATAACTGCAACACAAGATATATGATGCGGAATTGTCTGATGTAAAATGTTCTGTGACTTTGATAAATTTCTGTATAGTTTCTTTTTTAATATGCTTCTTGCATTTCCATGTAATTGTAACCATAGAAATAGATTATTTGAATGAAGATCTTCGTCAACTTTT
CDS Sequence
Protein Sequence