Gene Details:
- Gene ID: AT4G30620
- Gene Symbol: STCL
- Gene Name: STIC2 Like
- Description: Putative BCR, YbaB family COG0718;(source:Araport11)
- TAIR Accession: locus:2118721
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Gene Ontology:
- GO:0009507 — located in — chloroplast
- GO:0009941 — located in — chloroplast envelope
- GO:0005515 — enables — protein binding
- GO:1901566 — acts upstream of or within — organonitrogen compound biosynthetic process
- GO:0009570 — located in — chloroplast stroma
- GO:0006351 — acts upstream of or within — DNA-templated transcription
- GO:0015994 — acts upstream of or within — chlorophyll metabolic process
- GO:0009790 — acts upstream of or within — embryo development
- GO:0005886 — located in — plasma membrane
- GO:0065003 — acts upstream of or within — protein-containing complex assembly
- GO:0003677 — enables — DNA binding
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure
Literature:
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Suppressors of the Chloroplast Protein Import Mutant tic40 Reveal a Genetic Link between Protein Import and Thylakoid Biogenesis. DOI: 10.1105/tpc.16.00962 ; PMID: 28684427
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Sequences:
cDNA Sequence
- >AT4G30620.1
ATCTTGTCGAAGCACACTTCTCTGTTTCAGGAGAACAATGGCTTCGACGGCTACGAACACTGATTTCTTCAAGACTTTGCTTTCTCCTTTCTCAAATGGGAATGCGGCGCAACGAAGTAGTAGACAGAACATTGTTTGGTTAAATCGGAAGCAATCTGGAAATAATAACAGATCTCTTCGTGTTAATGGATTATTCGGAGGCGGAAAAAAGGACAATAAAGAGGATGGACAATCAAAGGCAGGAATTCTAGGTAACATGCAGAATTTGTATGAGACAGTGAAGAAAGCTCAAATGGTTGTTCAAGTAGAGGCTGTTAGAGTGCAGAAGGAGCTTGCTGTTGCTGAATTTGATGGTTATTGTCAAGGCGAGCTTGTCAAGGTTACATTATCAGGTAACCAGCAACCAATTCGCACTGATATCACTGATGCAGCAATGGAGTTAGGTTCTGAAAAACTTTCACTGCTGGTCACAGAAGCATACAAAGACGCACATTCAAAGAGTGTACTGGCTATGAAAGAAAGAATGAGTGATCTTGCGCAGAGCTTAGGGATGCCACCAGGCCTTGATGGATTAAAGTAACAAAACTTAATCTTTTTTGTGATTTCTTTCAACTTATAGGTATGAGAAGTCCAGTTCTTTTTGTTGTATATCGATCAGGCAGAGAGAAATAGAGCTCTGTTCTACTGAATCAGAGAGAGATATTTGAACCTTTGTCTT
CDS Sequence
Protein Sequence