Gene Details:
- Gene ID: AT4G30400
- Gene Symbol: ATL13
- Gene Name: Arabidopsis Toxicos en Levadura 13
- Description: RING/U-box superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , petiole , hypocotyl , collective leaf structure , pollen
Literature:
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Isolation and gene expression analysis of Arabidopsis thaliana mutants with constitutive expression of ATL2, an early elicitor-response RING-H2 zinc-finger gene. DOI: 10.1534/genetics.104.028043 ; PMID: 15238540
- Genetic interactions of a putative Arabidopsis thaliana ubiquitin-ligase with components of the Saccharomyces cerevisiae ubiquitination machinery. DOI: 10.1007/s00294-006-0093-y ; PMID: 16897085
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- Karrikins enhance light responses during germination and seedling development in Arabidopsis thaliana. DOI: 10.1073/pnas.0911635107 ; PMID: 20351290
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Sequences:
cDNA Sequence
- >AT4G30400.1
TTTATTTATTTTTCCAATTAATATTTTTGACATAAATTAAAATTTTCGTAAAACCTGCAGATTCAAGAAGCAAACCCTTGTTGGTGTAACTGTTGAATCTTAAATGAAAATGTCTCTTCTGTCATCATCAATGGTCCAACCTGTAATTCTCTTATTCATCACTCTCTCTATCTCTTTCATACCAAATCTTGAAATTAAAAAAACAGAGCAATCTTTCTCTCTCTGTTCTGAGAGCTTCCATGTCTGAAACCAACAACAACAAAGCTTGAGTCTTCCTGTTCCTTTTCCTTTTCTCTCTCAAACTCATGAAATTTTCTCGGGAAAATATGAAATGGGTTTTCCCAGAAATCAAAACAACTCAGAATTTCCTCTCTCCTTCATCACTTCCACAAGAACCACCGTTATCTCTCCGCTCCAGCGCAAACTTCGATCTAAACAGCAAAATCAGTCCAAGTATTCTCCTCATAATCATAATCCTCTCAATCATCTTCTTCATCTCCGGTCTCCTTCATCTCTTAGTCAGATTCCTCCTCACACCATCGAGCAGAGACAGAGAAGATTACTTCGACAACGTCACTGCTCTTCAAGGCCAGCTTCAACAGCTTTTTCATCTCCATGATTCTGGAGTTGACCAATCCTTCATCGACACGTTACCTGTTTTCCATTACAAATCCATAATCGGTCTCAAGAACTATCCTTTTGATTGTGCAGTTTGTCTTTGTGAGTTCGAAACAGAGGATAAGCTCAGGCTCTTACCTAAATGCAGCCACGCCTTTCACATGGATTGTATCGATACTTGGCTTCTATCTCACTCTACTTGTCCTTTGTGTAGATCCAGTCTCCTCTCTGATCTCTCTTCGCACCAAGATCCTCGTTCTTCTTTCCTCCTTGTGCTCGAGTCTGCGAGTGATCATAGCTCGAGAGAGATTGGAGGAGATAGAGACAGTGCAGCTTGTGTGGCTGCAAATGATGATATTGATGTGTCTAGTGCTCATCTTGGTTTGGTCGGAAACAATGATCTTGGATCAACCAGGATAGATTCGGGTCACGGAGATCAGTACCTGGATGGTGAATTGGGTGGTTCGGTTGGAAAGGTTGTTCCTTTTTCAGTTAAGCTAGGGAAGTTTAGGAATATAGATATTGGTGAAGGAACTAGTAGCAACAACAACATTGGTAATAGTAGTAGTTTAGATGAGAGGAGGTGTTTCTCAATGGGATCATATGAGTATATAATGGATGAAGAAACGACTCTTAAGGTTCATGTTTCAACCAAGAAACAATCAAGCAAGAACCGTGGCTTGCCCGGTCATAGGACAGCGATGTCCGAATGCGGGTTTGATCCAACAGGGAGATTGAAATTCAGTGGGAGTGGATCGATGAGGATAGTGGAAGAAGCGGCCGAGAAGAATGTAGTGGAAAGAGAGAGCTTTTCGGTATCGAAAATATGGCTAAGGGGGAAGAAGGAGAAGCATAGTAAAGTTCAAGGAAAAGAGGATAGTTCATTGGTTTCTTCGTCTTCGGGAAGAGCATTCTCTTTCAGGTTATCGAACCAGCGGAACCATCCCGATGCGATGATCGAAAGTGGTTGCGAAGAAGATAATCAAAAGTGCGAAAACTCGGAGTCTTTGGAGACTAAAACACCATCTTTTGCTAGGAGGACTATGCTTTGGCTTGCAGGGAGACAAAACAAGGTTGTTCATTCTTCTTCTTCAACTAATGTCTAGTTACTATAATTTTTCCATTTTCAAATTTAGTTTTCTGTTCAATTGTTTCTTTGTGTTAGTCCTCATAAGTGCAAAAAGATATATGAATCATTGTAGAAACGTGGTGTTGAGATACATATATTTTTAGACATAGATTGAGAACATTTGGTGCGTCTTGTATTATTTTTGACAAATCTTTTTCAGTTCTTGAATATTAGACCCAACAATTAAATTGTCGA
CDS Sequence
Protein Sequence