Information report for AT4G30280
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0000036 — leaf vascular system — sistema vascular de la hoja (Spanish, exact), 葉維管系 (Japanese, exact), leaf venation (related)
- PO:0003011 — root vascular system — sistema vascular de la raíz (Spanish, exact), 根維管系 (Japanese, exact), root vein (related)
Functional Keywords
Literature and News
- A comprehensive expression analysis of all members of a gene family encoding cell-wall enzymes allowed us to predict cis-regulatory regions involved in cell-wall construction in specific organs of Arabidopsis. DOI: 10.1093/pcp/pce154 ; PMID: 11673616
- Characterizing the stress/defense transcriptome of Arabidopsis. DOI: 10.1186/gb-2003-4-3-r20 ; PMID: 12620105
- Microarray analysis of E2Fa-DPa-overexpressing plants uncovers a cross-talking genetic network between DNA replication and nitrogen assimilation. DOI: 10.1242/jcs.00715 ; PMID: 12953064
- Transcriptional profiling by cDNA-AFLP and microarray analysis reveals novel insights into the early response to ethylene in Arabidopsis. DOI: 10.1111/j.1365-313X.2004.02156.x ; PMID: 15272873
- Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures. DOI: 10.1104/pp.104.039370 ; PMID: 15235117
- and darkness-regulated Arabidopsis genes: a focus on calmodulin-like and XTH genes. DOI: 10.1111/j.1469-8137.2004.01238.x ; PMID: 15720654
- Microarray analysis of genes that respond to gamma-irradiation in Arabidopsis. DOI: 10.1021/jf0486895 ; PMID: 15713015
- Transcriptional profiling of imbibed Brassica napus seed. DOI: 10.1016/j.ygeno.2005.07.006 ; PMID: 16125897
- Cuticular lipid composition, surface structure, and gene expression in Arabidopsis stem epidermis. DOI: 10.1104/pp.105.070805 ; PMID: 16299169
- Large-scale analysis of mRNA translation states during sucrose starvation in arabidopsis cells identifies cell proliferation and chromatin structure as targets of translational control. DOI: 10.1104/pp.106.079418 ; PMID: 16632591
- Gibberellin mobilizes distinct DELLA-dependent transcriptomes to regulate seed germination and floral development in Arabidopsis. DOI: 10.1104/pp.106.082289 ; PMID: 16920880
- The Arabidopsis SDG4 contributes to the regulation of pollen tube growth by methylation of histone H3 lysines 4 and 36 in mature pollen. DOI: 10.1016/j.ydbio.2007.12.016 ; PMID: 18252252
- Transcriptional responses of Arabidopsis thaliana plants to As (V) stress. DOI: 10.1186/1471-2229-8-87 ; PMID: 18684332
- Differences in enzymic properties of five recombinant xyloglucan endotransglucosylase/hydrolase (XTH) proteins of Arabidopsis thaliana. DOI: 10.1093/jxb/erq263 ; PMID: 20732879
- Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress. DOI: 10.1105/tpc.19.00463 ; PMID: 31519798
- Arabidopsis NF-YCs play dual roles in repressing brassinosteroid biosynthesis and signaling during light-regulated hypocotyl elongation. DOI: 10.1093/plcell/koab112 ; PMID: 33871651
- Differential expression of AtXTH17, AtXTH18, AtXTH19 and AtXTH20 genes in Arabidopsis roots. Physiological roles in specification in cell wall construction. DOI: 10.1093/pcp/pci013 ; PMID: 15659443
- A principal role for AtXTH18 in Arabidopsis thaliana root growth: a functional analysis using RNAi plants. DOI: 10.1007/s10265-006-0262-6 ; PMID: 16477366
- Comprehensive transcriptional profiling of NaCl-stressed Arabidopsis roots reveals novel classes of responsive genes. DOI: 10.1186/1471-2229-6-25 ; PMID: 17038189
Gene Resources
- UniProt: A0A178UZR9
- EMBL: CACRSJ010000109, CACSHJ010000095, LR881469
- AlphaFoldDB: A0A178UZR9
- EnsemblPlants: AT4G30280.1
- Gramene: AT4G30280.1
- KEGG: ath:AT4G30280
- Orthologous matrix: GDNRANI
- ExpressionAtlas: AT4G30280
- InterPro: IPR000757, IPR008263, IPR008264
- PANTHER: PTHR31062
- SUPFAM: SSF49899
- PROSITE: PS01034, PS51762
- Gene3D: 2.60.120.200
- OrthoDB: A0A178UZR9
- SWISS-MODEL: A0A178UZR9
Sequences
cDNA Sequence
- >AT4G30280.1
AAATTATCTTTTATTGGTTTCAATTTGTAACAACCAGCAAGAGGTCTAATGAGCCAACTAGAATACAGCCCACGATAAATAATCAAACCCATGAAACTTCCTTCTCTCTTTCCTTTGCCATTTCCAAACACTATATAAACTCATGTCGCTTAACTCAATTTTTCATCAACAATACATTTGAGATATCAATACACCTCCAAAATATATACAAAAATGAAGCTTTCTTGTGGTACAAGTTTTGCGTTCTTGATTATGTTTCTCTTTGCGGCACAATCTATGCATGTCTATGCGGGTAGCTTCCACAAAGATGTTCAGATACATTGGGGTGACGGCCGTGGAAAGGTGCGCGACAGAGATGGAAAGCTTCTATCTCTCTCGCTCGACAAATCCTCTGGATCCGGTTTTCAGTCCAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGTCCCTGGTAACTCAGCTGGAACAGTAACAACATTCTATCTTAAGTCTCCGGGAACTACGTGGGATGAGATTGATTTCGAGTTCTTAGGAAACCTAAGTGGTCATCCGTATACTCTCCATACTAATGTTTACACAAAAGGCTCAGGAGACAAAGAACAACAATTTCATCTATGGTTCGACCCAACTGTTAACTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTATTTTTACAGTTGATGGAATTCCTATTAGAGAGTTCAAGAACTCCGAGTCAATTGGAGTTCCGTTCCCAACGAAGCAACCAATGAGGCTTTACGCGAGTCTCTGGGAAGCCGAGCATTGGGCTACAAGGGGAGGGTTAGAGAAAACAGATTGGTCAAAGGCTCCTTTCACCGCTTTCTACAGAAACTACAATGTTGAAGGATGTGTATGGGCTAATGGAAAATCATCTTGTCCCGCAAATTCCTCATGGTTCACTCAACAACTCGATTCAAACGGCCAGACAAGAATGAAAGGGGTACAGAGTAAGTACATGGTCTACAACTATTGTAACGACAAAAGAAGGTTTCCTCGAGGTGTTCCTGTAGAGTGCAGTTAAATTGTTGATTCTTTGATACATGAATAAGTTACTTGGCATTGCCTTAGTAACTCAATTGAGTTCTTACATATTTTTATCATTCATTTGTTGCTCATATGTATGCGGTGTTTGTGTAAGATGATTTTAAGAAGTAATAAAAATAAATTATGGAAAAAAGCTTTCATTCGTAAACGTAATGAAAATTTAAAAATAAACACCGAG
CDS Sequence
Protein Sequence