Gene Details:
- Gene ID: AT4G29910
- Gene Symbol: ATORC5, EMB2798, ORC5
- Gene Name: EMBRYO DEFECTIVE 2798, origin recognition complex protein 5
- Description: origin recognition complex protein 5;(source:Araport11)
- TAIR Accession: locus:2123934
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
Gene Ontology:
- GO:0005515 — enables — protein binding
- GO:0005634 — located in — nucleus
- GO:0006260 — acts upstream of or within — DNA replication
- GO:0005664 — part of — nuclear origin of replication recognition complex
- GO:0003688 — enables — DNA replication origin binding
- GO:0006270 — involved in — DNA replication initiation
- GO:0006260 — involved in — DNA replication
- GO:0000808 — part of — origin recognition complex
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , root , shoot system , vascular leaf , flower , stem
Literature:
- Putative subunits of the maize origin of replication recognition complex ZmORC1-ZmORC5. DOI: 10.1093/nar/gkg138 ; PMID: 12527770
- Genetic interaction of an origin recognition complex subunit and the Polycomb group gene MEDEA during seed development. DOI: 10.1105/tpc.019059 ; PMID: 15020747
- Genome based identification and analysis of the pre-replicative complex of Arabidopsis thaliana. DOI: 10.1016/j.febslet.2004.07.088 ; PMID: 15358564
- Genome-wide analysis of the core DNA replication machinery in the higher plants Arabidopsis and rice. DOI: 10.1104/pp.107.101105 ; PMID: 17556508
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Molecular foundations of reproductive lethality in Arabidopsis thaliana. DOI: 10.1371/journal.pone.0028398 ; PMID: 22164284
- Systematic identification of functional plant modules through the integration of complementary data sources. DOI: 10.1104/pp.112.196725 ; PMID: 22589469
- BICELLULAR POLLEN 1 is a modulator of DNA replication and pollen development in Arabidopsis. DOI: 10.1111/nph.15610 ; PMID: 30484867
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Conserved initiator proteins in eukaryotes. DOI: 10.1126/science.270.5242.1667 ; PMID: 7502077
- The genes encoding Arabidopsis ORC subunits are E2F targets and the two ORC1 genes are differently expressed in proliferating and endoreplicating cells. DOI: 10.1093/nar/gki854 ; PMID: 16179646
Sequences:
cDNA Sequence
- >AT4G29910.1
GTGGTTTACTCAGTGAATCGCCACTACTGACGCACACAGAGCACGACAACGTCCTTTGTCTTTGTTTCTTATCTTCTTTTCTCGTTTAGTTCTGTTGGGATTGGGAATCGGAGACTTGCAGGTTTTAAGAACATGCCTCCTAAAGAGGAGAGTTCGAAAGTCACTCGAAGAAGCACTAGGTCATCAGCTTCTGTAACTGTTGAGAACTCAGAACCTATTGAATCCCACACACCAACCATTGATGATCTCACATTTGGGGAAGAATCAATCACAATTGATGCTGTTCTATCTAATTTTCCAGGCAGACGCTCTCAGATTTTCGACTTTATTCGACTTATGGGGCCGTTAGATTGCCCTACTCTTCCAATAATGATCTATGGAGGTGCTTCTACGGGAAAAACCAGTGTTGTTCTTCAGGTGCTCAGGCATCTCAATCGTCCCTTTGTTTATTCAAGCTGTCGTACGTGTTACAATCCCCGTATCTTGTTTGAGTCGATTCTGAATCAGTCGTTGCTACATAGGAAGTGTTCTTTAAACGGGTATTCTAGTGCGAAACGATGTGACAAGCCATCTGATTTTGTCAACTTGCTTCGTGAAGCCCTTAGTAGTGTGATAAAGACTCTCGAGTCTACTTCCGAAACCTCAAGATCAGATAAGCCGGATGAAAAACCCATGGGGAAGATGGTGTACTTAATACTTGATAATGTGGATCTTATCAGAGACTGGGATAAAGGCACCATCATTCTGCAGTTTCTTTTCAGTTTGTATACTGTTTTGAAGATGCCTCAACTTGGTATAATACTTATCAGTGGTTTGCCACCAGATGTGTATTACTCAAACATGGGATACACAGATCCTATACCTCTTTATTTTCCTGAGTATTCTGAAGAGGATCTTCGTCAAATTTTCTTGAGAAATCAACCTAACCGAAAATTGTACTCTGCATTCCTTGACGTTGTGTTGAAACCATTCTGTAGAGTCACCAGGAGAGTTGAGGAACTGTCTACTACCTTCTCATTATTGTTCAGAAAGTTTTGTGAGCCACTTGATGATTTAGGGATTTCACCAAATGAAGACATGAAGAGAAGGCTATATAGCCATCTTAAGCCGCTTATTGCTCATTGTTTAAATGAGATATTCAGGGTCTCTAGTCACCCTCATGATGGCGAAACCAGAGGCGAGAGAAGGCAGAAAGCCAGCTACAGTTCTGAAAACCGTGAAGAACTTGAAATATTGGACTTCCATATGTCTACTTCAGCAAAGTTTCTTCTTCTTTCGGCATTTCTCGCTTCGAGAAACCCAGCAACGCTAGACGCGTCAATGTTTGACTCCACAGGGGGAATGGATAATCGTAAAAGAAAGCGGAAGGCCTCTGAGAAATCAATGGAAAAGAAGGAAATTGCAGAGCAGGAAGCAGTCATGAAAGGACCTGGAAGCTTTCCACTGGAAAGACTATTGGCGATATTCCAATGTATTGCCTCCGTTGGAGATTCTTCATTTGGCGAAGAGGACGAAGAAGAAGAAAACACAACGGGTTACGACAAAGAGAATAACAATCTGATGTCTGATATTCTGCTGCAAGTGTCAAGTCTATGTGATGCTAACTTTTTAATCAAAAGCGGAAGCTGCCCATTAGAAGGTTCTATTAGGTACCGTTCTATGGTCTCTGAAGATCTGGCTCAGAAGGTTGCAAAAAGTCTTAGCTTTCCACTATCCAAATACTTGTACAGAAGATGATGAAAATGTGAAATTCAAATGTTTTGGGAGGAAGAAACTAACGGTGCACTCTTAATTTAGTTCTTGTATTGTACTATGGATGTATCGGAAACTTCATAGTATTTGAAGCAATTTCCCACTTAACTATGTGGTCTGTAAAAATTTGTTTAAAACATTTTTACTAGAGTTTCTATGGCAATTGATTTCGGAATCTATCTTAGTTAGGTTGTTTCATTTCTTTTGAAACCTAAGAATAAGATTAAACGTGTCTGTTAAGCAAATGAAACTCT - >AT4G29910.2
GTGGTTTACTCAGTGAATCGCCACTACTGACGCACACAGAGCACGACAACGTCCTTTGTCTTTGTTTCTTATCTTCTTTTCTCGTTTAGTTCTGTTGGGATTGGGAATCGGAGACTTGCAGGTTTTAAGAACATGCCTCCTAAAGAGGAGAGTTCGAAAGTCACTCGAAGAAGCACTAGGTCATCAGCTTCTGTAACTGTTGAGAACTCAGAACCTATTGAATCCCACACACCAACCATTGATGATCTCACATTTGGGGAAGAATCAATCACAATTGATGCTGTTCTATCTAATTTTCCAGGCAGACGCTCTCAGATTTTCGACTTTATTCGACTTATGGGGCCGTTAGATTGCCCTACTCTTCCAATAATGATCTATGGAGGTGCTTCTACGGGAAAAACCAGTGTTGTTCTTCAGGTGCTCAGGCATCTCAATCGTCCCTTTGTTTATTCAAGCTGTCGTACGTGTTACAATCCCCGTATCTTGTTTGAGTCGATTCTGAATCAGTCGTTGCTACATAGGAAGTGTTCTTTAAACGGGTATTCTAGTGCGAAACGATGTGACAAGCCATCTGATTTTGTCAACTTGCTTCGTGAAGCCCTTAGTAGTGTGATAAAGACTCTCGAGTCTACTTCCGAAACCTCAAGATCAGATAAGCCGGATGAAAAACCCATGGGGAAGATGGTGTACTTAATACTTGATAATGTGGATCTTATCAGAGACTGGGATAAAGGCACCATCATTCTGCAGTTTCTTTTCAGTTTGTATACTGTTTTGAAGATGCCTCAACTTGGTATAATACTTATCAGTGGTTTGCCACCAGATGTGTATTACTCAAACATGGGATACACAGATCCTATACCTCTTTATTTTCCTGAGTATTCTGAAGAGGATCTTCGTCAAATTTTCTTGAGAAATCAACCTAACCGAAAATTGTACTCTGCATTCCTTGACGTTGTGTTGAAACCATTCTGTAGAGTCACCAGGAGAGTTGAGGAACTGTCTACTACCTTCTCATTATTGTTCAGAAAGTTTTGTGAGCCACTTGATGATTTAGGGATTTCACCAAATGAAGACATGAAGAGAAGGCTATATAGCCATCTTAAGCCGCTTATTGCTCATTGTTTAAATGAGATATTCAGGGTCTCTAGTCACCCTCATGATGGCGAAACCAGAGGCGAGAGAAGGCAGAAAGCCAGCTACAGTTCTGAAAACCGTGAAGAACTTGAAATATTGGACTTCCATATGTCTACTTCAGCAAAGTTTCTTCTTCTTTCGGCATTTCTCGCTTCGAGAAACCCAGCAACGCTAGACGCGTCAATGTTTGACTCCACAGGGGGAATGGATAATCGTAAAAGAAAGCGGAAGGCCTCTGAGAAATCAATGGAAAAGAAGGAAATTGCAGAGCAGGAAGCAGTCATGAAAGGACCTGGAAGCTTTCCACTGGAAAGACTATTGGCGATATTCCAATGTATTGCCTCCGTTGGAGATTCTTCATTTGGCGAAGAGGACGAAGAAGAAGAAAACACAACGGGTTACGACAAAGAGAATAACAATCTGATGTCTGATATTCTGCTGCAAGTGTCAAGTCTATGTGATGCTAACTTTTTAATCAAAAGCGGAAGCTGCCCATTAGAAGGTTCTATTAGGTACCGTTCTATGGTCTCTGAAGATCTGGCTCAGAAGGTTGCAAAAAGTCTTAGCTTTCCACTATCCAAATACTTGTACAGAAGATGATGAAAATGTGAAATTCAAATGTTTTGGGAGGAAGAAACTAACGGTGCACTCTTAATTTAGTTCTTGTATTGTACTATGGATGTATCGGAAACTTCATAGTATTTGAAGCAATTTCCCACTTAACTATGTGGTCTGTAAAAATTTGTTTAAAACATTTTTACTAGAGTTTCTATGGCAATTGATTTCGGAATCTATCTTAGTTAGGTTGTTTCATTTCTTTTGAAACCTAAGAATAAGATTAAACGTGTCTGTTAAGCAAATGAAACTCT
CDS Sequence
Protein Sequence