Gene Details:
- Gene ID: AT4G29900
- Gene Symbol: ACA10, ATACA10, CIF1
- Gene Name: autoinhibited Ca(2+)-ATPase 10, COMPACT INFLORESCENCE 1
- Description: autoinhibited Ca(2+)-ATPase 10;(source:Araport11)
- TAIR Accession: locus:2123924
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Gene Ontology:
- GO:0048281 — acts upstream of or within — inflorescence morphogenesis
- GO:0005886 — located in — plasma membrane
- GO:0005388 — enables — P-type calcium transporter activity
- GO:0048367 — acts upstream of or within — shoot system development
- GO:0016887 — enables — ATP hydrolysis activity
- GO:0009506 — located in — plasmodesma
- GO:0005634 — located in — nucleus
- GO:0051480 — involved in — regulation of cytosolic calcium ion concentration
- GO:0070588 — involved in — calcium ion transmembrane transport
- GO:0043231 — is active in — intracellular membrane-bounded organelle
Germplasm Phenotype:
- CS2106712 — reduced in inflorescence height and display increased axillary stem formation
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , guard cell
Literature:
- Molecular aspects of higher plant P-type Ca(2+)-ATPases. DOI: 10.1016/s0005-2736(00)00131-0 ; PMID: 10748247
- Genes encoding calmodulin-binding proteins in the Arabidopsis genome. DOI: 10.1074/jbc.M111626200 ; PMID: 11782485
- Inventory of the superfamily of P-type ion pumps in Arabidopsis. DOI: 10.1104/pp.126.2.696 ; PMID: 11402198
- Genomic comparison of P-type ATPase ion pumps in Arabidopsis and rice. DOI: 10.1104/pp.103.021923 ; PMID: 12805592
- Localization of organelle proteins by isotope tagging (LOPIT). DOI: 10.1074/mcp.T400009-MCP200 ; PMID: 15295017
- The potassium-dependent transcriptome of Arabidopsis reveals a prominent role of jasmonic acid in nutrient signaling. DOI: 10.1104/pp.104.046482 ; PMID: 15347784
- A quantitative analysis of Arabidopsis plasma membrane using trypsin-catalyzed (18)O labeling. DOI: 10.1074/mcp.M500414-MCP200 ; PMID: 16635983
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Integrating membrane transport with male gametophyte development and function through transcriptomics. DOI: 10.1104/pp.105.074708 ; PMID: 16607029
- Comparison between a coffee single copy chromosomal region and Arabidopsis duplicated counterparts evidenced high level synteny between the coffee genome and the ancestral Arabidopsis genome. DOI: 10.1007/s11103-007-9191-6 ; PMID: 17551672
- Genome-wide analysis of Arabidopsis responsive transcriptome to nitrogen limitation and its regulation by the ubiquitin ligase gene NLA. DOI: 10.1007/s11103-007-9241-0 ; PMID: 17885809
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Plasma Membrane-Localized Calcium Pumps and Copines Coordinately Regulate Pollen Germination and Fertility in Arabidopsis. DOI: 10.3390/ijms19061774 ; PMID: 29914054
- MIZ1 regulates ECA1 to generate a slow, long-distance phloem-transmitted Ca(2+) signal essential for root water tracking in Arabidopsis. DOI: 10.1073/pnas.1804130115 ; PMID: 30012618
- Expression of the Tobacco Non-symbiotic Class 1 Hemoglobin Gene Hb1 Reduces Cadmium Levels by Modulating Cd Transporter Expression Through Decreasing Nitric Oxide and ROS Level in Arabidopsis. DOI: 10.3389/fpls.2019.00201 ; PMID: 30853969
- Rapid sequence and functional diversification of a miRNA superfamily targeting calcium signaling components in seed plants. DOI: 10.1111/nph.18185 ; PMID: 35485957
- Resting cytosol Ca2+ level maintained by Ca2+ pumps affects environmental responses in Arabidopsis. DOI: 10.1093/plphys/kiad047 ; PMID: 36715402
- Genes encoding calmodulin-binding proteins in the Arabidopsis genome. DOI: 10.1074/jbc.M111626200 ; PMID: 11782485
- Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. DOI: 10.1074/mcp.T300006-MCP200 ; PMID: 14506206
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
Sequences:
cDNA Sequence
- >AT4G29900.2
GTGACGACTGACGAGTCAAAGCTCCTTCGAGGAAGTTTCCTATAGAGCTCTCTCTCTATCTCCTCTCGTTCCTCCTCTATTTTCTCGAGAAAGTGACGGAAAATAATTCAGCAGCCAGAGAGTATCAAAGGGAAAGAGCTGAGAAAATCCTCTGTTCCGCCGATAATTGAGGTAGATGATTATATTATATTTCTTTTTTTTCGATTCAACAGTAACTATAGAAAATTTGTTGTTTCTGGAATCGCCAGAGATTTTTTTTTTCTCTTTTTTTTTCCTCTTTGTTTACCTTTTTGCTTCTGCTACTTTGTGTTTGTTTATTCGAATCTCTCCTGCGCTTTCGCACGATTTACGATGTTACCCTACACGATTGTTGTTGGACCACTTCCTACACCTAAAACTAATATTTCACTGAGCTAGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTTTTGAATTTTGAAATTTCCGGGAAATTTTTCGGTATCTATTCGTTTCAGTGTATCTATCGGAAAACGGATTTTCGAAGGTTGTTTGGTTTTAGGTGGCATAATTTGGCGAGGAGTGGTAATTACTGCTTCGTAACAGTGAAATCTTAAAGAAGAGCGTGTTGCTATCTCTCCTGCGACAGTCATGAGTGGACAATTCAATAATTCTCCACGAGGGGAAGACAAGGACGTGGAGGCTGGAACCAGCAGCTTCACCGAATATGAAGATAGTCCGTTTGACATTGCCAGTACTAAGAATGCTCCAGTGGAGCGGCTACGCCGTTGGAGGCAAGCTGCGCTTGTTCTTAATGCTTCTCGTCGATTTCGATATACGCTGGACTTAAAAAGGGAAGAAGATAAGAAACAGATGCTGAGGAAGATGAGAGCGCACGCCCAAGCAATAAGAGCTGCACACCTTTTTAAAGCAGCTGCAAGCCGCGTGACTGGAATTGCAAGTCCACTTCCAACTCCTGGCGGTGGTGATTTTGGTATCGGACAGGAGCAGATTGTGTCAATATCAAGGGATCAAAATATAGGAGCTCTTCAAGAGCTTGGAGGGGTAAGAGGGTTATCTGACCTGTTGAAAACAAACTTGGAGAAGGGTATACACGGGGATGATGATGACATATTGAAAAGGAAATCTGCTTTTGGATCAAACACATACCCTCAGAAGAAAGGGAGGAGTTTCTGGAGGTTTGTATGGGAAGCTTCTCAAGATCTTACTTTGATCATACTGATTGTAGCAGCAGTTGCTTCTTTGGCATTGGGAATAAAGACCGAGGGTATCGAAAAGGGATGGTACGATGGTATCAGCATTGCTTTTGCCGTTCTTCTTGTCATTGTGGTGACAGCTACCAGTGATTATCGGCAATCTCTTCAATTCCAGAACTTAAATGAAGAGAAAAGAAATATACGTCTAGAGGTAACCCGTGATGGGAGAAGAGTGGAGATTTCAATTTATGACATTGTAGTAGGCGATGTCATACCCCTCAATATTGGTGATCAGGTACCTGCGGATGGAGTTTTAGTTGCTGGACATTCCCTTGCAGTTGATGAGTCCAGCATGACTGGAGAGAGCAAAATTGTTCAAAAAAACTCTACTAAGCATCCATTCCTAATGTCTGGCTGTAAAGTTGCAGATGGCAATGGGACAATGTTGGTTACTGGGGTAGGGGTCAACACTGAATGGGGCTTACTAATGGCTAGCGTCTCAGAGGACAATGGTGGAGAAACACCATTGCAGGTGCGCTTGAATGGTGTAGCAACATTTATCGGGATTGTCGGGCTCACAGTTGCTGGCGTTGTATTATTTGTCCTAGTTGTCCGTTACTTTACCGGTCACACGAAGAATGAACAGGGAGGCCCACAGTTTATTGGAGGGAAGACAAAATTTGAGCACGTGCTAGATGATCTTGTTGAAATCTTCACTGTTGCAGTTACAATTGTTGTAGTGGCAGTGCCTGAAGGGCTTCCTTTAGCTGTTACCTTGACTCTTGCGTATTCCATGAGAAAAATGATGGCAGATAAAGCTTTGGTGCGTAGGCTTTCAGCCTGTGAAACCATGGGGTCTGCAACAACAATTTGCAGTGATAAGACTGGAACTTTGACCTTAAACGAGATGACCGTTGTTGAGTGTTATGCTGGGTTACAAAAGATGGATTCTCCCGACAGCAGCTCAAAATTGCCATCTGCTTTTACATCCATACTTGTTGAGGGTATTGCTCACAATACAACCGGCAGTGTGTTCCGATCTGAAAGTGGTGAGATTCAGGTTTCTGGATCTCCTACAGAAAGAGCAATTCTCAATTGGGCGATAAAGTTGGGTATGGATTTTGATGCTCTTAAGTCTGAGTCTTCTGCTGTACAATTTTTTCCATTCAACTCAGAGAAGAAACGAGGAGGTGTAGCAGTGAAATCACCAGATTCGAGTGTCCATATTCACTGGAAAGGTGCTGCCGAAATTGTTTTGGGATCCTGCACGCACTATATGGATGAGAGTGAGAGTTTTGTAGATATGAGTGAAGATAAGATGGGTGGGTTAAAAGATGCTATCGATGATATGGCTGCAAGGAGTCTGCGCTGTGTTGCAATTGCCTTCCGAACATTTGAAGCGGATAAGATTCCAACTGATGAAGAGCAACTCTCTAGATGGGAATTACCTGAGGATGATCTTATATTGTTGGCTATCGTTGGTATTAAGGATCCATGTCGCCCAGGTGTCAAAAATTCAGTTTTACTGTGTCAACAAGCTGGAGTCAAGGTTCGTATGGTGACTGGTGATAACATTCAGACTGCCAAAGCAATTGCACTGGAGTGTGGTATATTAGCTTCAGACTCAGATGCTAGTGAGCCTAATCTGATTGAAGGAAAAGTATTTCGATCCTATTCAGAAGAAGAAAGAGATAGGATTTGTGAAGAGATATCTGTAATGGGTAGATCATCACCCAATGACAAACTTCTTCTTGTGCAATCGCTGAAGAGGAGGGGACACGTCGTGGCTGTGACTGGTGATGGAACCAATGATGCTCCTGCACTGCACGAGGCAGATATAGGTCTCGCAATGGGTATCCAAGGCACCGAAGTTGCAAAGGAAAAGTCAGACATCATTATCTTGGATGACAACTTTGAATCCGTTGTGAAGGTTGTCCGTTGGGGTCGATCTGTGTATGCGAATATTCAAAAGTTCATCCAGTTTCAGCTCACGGTTAATGTCGCAGCTCTTGTCATCAATGTGGTGGCTGCCATATCCGCGGGTGAAGTTCCTCTAACTGCAGTACAGCTCCTTTGGGTCAATCTTATAATGGATACTCTTGGGGCTCTTGCTTTAGCCACTGAGCCACCAACCGATCACTTAATGGATCGAGCGCCTGTTGGCAGAAGAGAACCTCTCATCACAAATATCATGTGGAGAAACTTGTTTATACAAGCGATGTACCAAGTGACAGTCTTGTTAATCCTCAATTTCCGTGGAATAAGTATCCTGCATCTGAAGAGTAAGCCAAATGCTGAGAGAGTGAAGAATACAGTCATCTTCAATGCCTTTGTCATCTGCCAGGTATTCAACGAGTTCAATGCACGGAAGCCAGATGAAATAAACATTTTCCGAGGAGTTCTCAGGAATCACCTTTTTGTGGGCATCATCTCTATCACCATTGTGCTCCAGGTAGTCATCGTCGAGTTCCTTGGAACATTTGCCTCAACGACTAAGCTTGATTGGGAGATGTGGCTCGTCTGTATCGGAATCGGTTCTATCAGTTGGCCTTTGGCGGTGATCGGAAAATTGATACCGGTTCCAGAAACTCCGGTTAGTCAATACTTTAGAATAAACCGGTGGAGAAGGAACTCATCAGGTTAA - >AT4G29900.1
GTGACGACTGACGAGTCAAAGCTCCTTCGAGGAAGTTTCCTATAGAGCTCTCTCTCTATCTCCTCTCGTTCCTCCTCTATTTTCTCGAGAAAGTGACGGAAAATAATTCAGCAGCCAGAGAGTATCAAAGGGAAAGAGCTGAGAAAATCCTCTGTTCCGCCGATAATTGAGGTAGATGATTATATTATATTTCTTTTTTTTCGATTCAACAGTAACTATAGAAAATTTGTTGTTTCTGGAATCGCCAGAGATTTTTTTTTTCTCTTTTTTTTTCCTCTTTGTTTACCTTTTTGCTTCTGCTACTTTGTGTTTGTTTATTCGAATCTCTCCTGCGCTTTCGCACGATTTACGATGTTACCCTACACGATTGTTGTTGGACCACTTCCTACACCTAAAACTAATATTTCACTGAGCTAGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTTTTGAATTTTGAAATTTCCGGGAAATTTTTCGGTATCTATTCGTTTCAGTGTATCTATCGGAAAACGGATTTTCGAAGGTTGTTTGGTTTTAGGTGGCATAATTTGGCGAGGAGTGGTAATTACTGCTTCGTAACAGTGAAATCTTAAAGAAGAGCGTGTTGCTATCTCTCCTGCGACAGTCATGAGTGGACAATTCAATAATTCTCCACGAGGGGAAGACAAGGACGTGGAGGCTGGAACCAGCAGCTTCACCGAATATGAAGATAGTCCGTTTGACATTGCCAGTACTAAGAATGCTCCAGTGGAGCGGCTACGCCGTTGGAGGCAAGCTGCGCTTGTTCTTAATGCTTCTCGTCGATTTCGATATACGCTGGACTTAAAAAGGGAAGAAGATAAGAAACAGATGCTGAGGAAGATGAGAGCGCACGCCCAAGCAATAAGAGCTGCACACCTTTTTAAAGCAGCTGCAAGCCGCGTGACTGGAATTGCAAGTCCACTTCCAACTCCTGGCGGTGGTGATTTTGGTATCGGACAGGAGCAGATTGTGTCAATATCAAGGGATCAAAATATAGGAGCTCTTCAAGAGCTTGGAGGGGTAAGAGGGTTATCTGACCTGTTGAAAACAAACTTGGAGAAGGGTATACACGGGGATGATGATGACATATTGAAAAGGAAATCTGCTTTTGGATCAAACACATACCCTCAGAAGAAAGGGAGGAGTTTCTGGAGGTTTGTATGGGAAGCTTCTCAAGATCTTACTTTGATCATACTGATTGTAGCAGCAGTTGCTTCTTTGGCATTGGGAATAAAGACCGAGGGTATCGAAAAGGGATGGTACGATGGTATCAGCATTGCTTTTGCCGTTCTTCTTGTCATTGTGGTGACAGCTACCAGTGATTATCGGCAATCTCTTCAATTCCAGAACTTAAATGAAGAGAAAAGAAATATACGTCTAGAGGTAACCCGTGATGGGAGAAGAGTGGAGATTTCAATTTATGACATTGTAGTAGGCGATGTCATACCCCTCAATATTGGTGATCAGGTACCTGCGGATGGAGTTTTAGTTGCTGGACATTCCCTTGCAGTTGATGAGTCCAGCATGACTGGAGAGAGCAAAATTGTTCAAAAAAACTCTACTAAGCATCCATTCCTAATGTCTGGCTGTAAAGTTGCAGATGGCAATGGGACAATGTTGGTTACTGGGGTAGGGGTCAACACTGAATGGGGCTTACTAATGGCTAGCGTCTCAGAGGACAATGGTGGAGAAACACCATTGCAGGTGCGCTTGAATGGTGTAGCAACATTTATCGGGATTGTCGGGCTCACAGTTGCTGGCGTTGTATTATTTGTCCTAGTTGTCCGTTACTTTACCGGTCACACGAAGAATGAACAGGGAGGCCCACAGTTTATTGGAGGGAAGACAAAATTTGAGCACGTGCTAGATGATCTTGTTGAAATCTTCACTGTTGCAGTTACAATTGTTGTAGTGGCAGTGCCTGAAGGGCTTCCTTTAGCTGTTACCTTGACTCTTGCGTATTCCATGAGAAAAATGATGGCAGATAAAGCTTTGGTGCGTAGGCTTTCAGCCTGTGAAACCATGGGGTCTGCAACAACAATTTGCAGTGATAAGACTGGAACTTTGACCTTAAACGAGATGACCGTTGTTGAGTGTTATGCTGGGTTACAAAAGATGGATTCTCCCGACAGCAGCTCAAAATTGCCATCTGCTTTTACATCCATACTTGTTGAGGGTATTGCTCACAATACAACCGGCAGTGTGTTCCGATCTGAAAGTGGTGAGATTCAGGTTTCTGGATCTCCTACAGAAAGAGCAATTCTCAATTGGGCGATAAAGTTGGGTATGGATTTTGATGCTCTTAAGTCTGAGTCTTCTGCTGTACAATTTTTTCCATTCAACTCAGAGAAGAAACGAGGAGGTGTAGCAGTGAAATCACCAGATTCGAGTGTCCATATTCACTGGAAAGGTGCTGCCGAAATTGTTTTGGGATCCTGCACGCACTATATGGATGAGAGTGAGAGTTTTGTAGATATGAGTGAAGATAAGATGGGTGGGTTAAAAGATGCTATCGATGATATGGCTGCAAGGAGTCTGCGCTGTGTTGCAATTGCCTTCCGAACATTTGAAGCGGATAAGATTCCAACTGATGAAGAGCAACTCTCTAGATGGGAATTACCTGAGGATGATCTTATATTGTTGGCTATCGTTGGTATTAAGGATCCATGTCGCCCAGGTGTCAAAAATTCAGTTTTACTGTGTCAACAAGCTGGAGTCAAGGTTCGTATGGTGACTGGTGATAACATTCAGACTGCCAAAGCAATTGCACTGGAGTGTGGTATATTAGCTTCAGACTCAGATGCTAGTGAGCCTAATCTGATTGAAGGAAAAGTATTTCGATCCTATTCAGAAGAAGAAAGAGATAGGATTTGTGAAGAGATATCTGTAATGGGTAGATCATCACCCAATGACAAACTTCTTCTTGTGCAATCGCTGAAGAGGAGGGGACACGTCGTGGCTGTGACTGGTGATGGAACCAATGATGCTCCTGCACTGCACGAGGCAGATATAGGTCTCGCAATGGGTATCCAAGGCACCGAAGTTGCAAAGGAAAAGTCAGACATCATTATCTTGGATGACAACTTTGAATCCGTTGTGAAGGTTGTCCGTTGGGGTCGATCTGTGTATGCGAATATTCAAAAGTTCATCCAGTTTCAGCTCACGGTTAATGTCGCAGCTCTTGTCATCAATGTGGTGGCTGCCATATCCGCGGGTGAAGTTCCTCTAACTGCAGTACAGCTCCTTTGGGTCAATCTTATAATGGATACTCTTGGGGCTCTTGCTTTAGCCACTGAGCCACCAACCGATCACTTAATGGATCGAGCGCCTGTTGGCAGAAGAGAACCTCTCATCACAAATATCATGTGGAGAAACTTGTTTATACAAGCGATGTACCAAGTGACAGTCTTGTTAATCCTCAATTTCCGTGGAATAAGTATCCTGCATCTGAAGAGTAAGCCAAATGCTGAGAGAGTGAAGAATACAGTCATCTTCAATGCCTTTGTCATCTGCCAGGTATTCAACGAGTTCAATGCACGGAAGCCAGATGAAATAAACATTTTCCGAGGAGTTCTCAGGAATCACCTTTTTGTGGGCATCATCTCTATCACCATTGTGCTCCAGGTAGTCATCGTCGAGTTCCTTGGAACATTTGCCTCAACGACTAAGCTTGATTGGGAGATGTGGCTCGTCTGTATCGGAATCGGTTCTATCAGTTGGCCTTTGGCGGTGATCGGAAAATTGATACCGGTTCCAGAAACTCCGGTTAGTCAATACTTTAGAATAAACCGGTGGAGAAGGAACTCATCAGGTTAA
CDS Sequence
Protein Sequence