Information report for AT4G29390
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0005737 — located in — cytoplasm
- GO:0005886 — located in — plasma membrane
- GO:0005730 — located in — nucleolus
- GO:0022627 — located in — cytosolic small ribosomal subunit
- GO:0003729 — enables — mRNA binding
Functional Keywords
Literature and News
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- a high-density colony array study (HDCA). DOI: 10.1046/j.1365-313x.2003.01847.x ; PMID: 12969430
- Comparison of gene expression in segregating families identifies genes and genomic regions involved in a novel adaptation, zinc hyperaccumulation. DOI: 10.1111/j.1365-294X.2006.02981.x ; PMID: 16911220
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
Gene Resources
- UniProt: A0A384L8A2
- EMBL: CACRSJ010000105, CACRSJ010000109, CACRSJ010000110
- AlphaFoldDB: A0A384L8A2
- EnsemblPlants: AT2G19750.1, AT4G29390.1, AT5G56670.1
- Gramene: AT2G19750.1, AT4G29390.1, AT5G56670.1
- KEGG: ath:AT2G19750, ath:AT4G29390, ath:AT5G56670
- Orthologous matrix: YNTQNVP
- ExpressionAtlas: AT4G29390
- InterPro: IPR006846
- PANTHER: PTHR12650, PTHR12650:SF33
- OrthoDB: A0A384L8A2
- SWISS-MODEL: A0A384L8A2
Sequences
cDNA Sequence
- >AT4G29390.1
ATCGTCTTCATCACTTAAATATCAGTCATAGAAAACCCTAATCTCTGAGAAGAGTTAAAAGCGTTGCCGTACACTATAACCGGAGAGAGCGCCGATTCCGTCGTCAGAAGAATCCTCGTAAACAATCATGGGTAAGGTACACGGTTCCTTGGCTCGTGCCGGTAAGGTGAGAGGTCAGACACCGAAAGTGGCAAAGCAGGATAAGAAGAAGAAGCCACGTGGCCGTGCTCACAAAAGGTTGCAACACAATCGCCGTTTCGTAACCGCCGTTGTTGGATTTGGCAAGAAGAGAGGACCCAACTCTTCTGAGAAGTAGATGATGATGATGATCACACTTCATGAAGCTTGAAGTTTTACTTTCTCGTTAGTATGAATTCTGCAATATCCGCTTTGTTATCGATATTTGCTTATTTGGTTTTTCTATAGACGATGTAATTCTCTTGTTCATTTCTCCATCGAATTGACTTTTGACCATACTTTTTTCGACATATGTTATTTGCAACCTTGATAGCATTCTACAATCACTGTTTACTCTCGAGCCAAGTACATGTTCCTCAACGGATTGACATTTCAGAGTTAGAAACTTAGAATTGTACTGCAATGTGTTTACATAGATACAAAAATGATGTAATATGATGATACCTTTTTATAAGTATATGCTTTTGAACGATC
CDS Sequence
Protein Sequence