Gene Details:
- Gene ID: AT4G29140
- Gene Symbol: ABS3, ADP1, ADS1
- Gene Name: Arabidopsis abnormal shoot3, ALTERED DEVELOPMENT PROGRAM 1, ACTIVATED DISEASE SUSCEPTIBILITY 1
- Description: MATE efflux family protein;(source:Araport11)
- TAIR Accession: locus:2119941
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
Gene Ontology:
- GO:0046620 — involved in — regulation of organ growth
- GO:0015297 — enables — antiporter activity
- GO:0010008 — located in — endosome membrane
- GO:0005770 — located in — late endosome
- GO:1990961 — involved in — xenobiotic detoxification by transmembrane export across the plasma membrane
- GO:0042910 — enables — xenobiotic transmembrane transporter activity
- GO:0010600 — involved in — regulation of auxin biosynthetic process
- GO:0010015 — involved in — root morphogenesis
- GO:0016020 — is active in — membrane
- GO:0022857 — enables — transmembrane transporter activity
- GO:0031348 — acts upstream of or within — negative regulation of defense response
- GO:0005886 — located in — plasma membrane
Germplasm Phenotype:
- CS924217 — Delayed flowering (2 weeks later than wild type); no other visible phenotype.
Function-related keywords:
Literature:
- Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. DOI: 10.1006/jmbi.2000.4315 ; PMID: 11152613
- ADS1 encodes a MATE-transporter that negatively regulates plant disease resistance. DOI: 10.1111/j.1469-8137.2011.03820.x ; PMID: 21762165
- A survey of dominant mutations in Arabidopsis thaliana. DOI: 10.1016/j.tplants.2012.08.006 ; PMID: 22995285
- A subgroup of MATE transporter genes regulates hypocotyl cell elongation in Arabidopsis. DOI: 10.1093/jxb/erv344 ; PMID: 26160579
- Noncanonical ATG8-ABS3 interaction controls senescence in plants. DOI: 10.1038/s41477-018-0348-x ; PMID: 30664732
Sequences:
cDNA Sequence
- >AT4G29140.1
CTTAGATTCTTTTTCATGAAAAAATTTCGAAAAATTAAAAATGAAGAAAAAAAAAATCCTGCCAACTCCTTTATTAAGATGGTAAGAGAGAGCTCTGAGAAGAGAGAAGCAGCACCAAAAAAAATTCATATCTCTCTTTCCTTTCAATTTTCTCAGTTGTTAAAACCTCTCATACTCATTAGAGAGCTCTTCACGAGAGAACTCTTTCTCTTTCCCATTAAAGATCAAATCTTTCTTCTTCTTCATCAACACCATCATCATCATCACCGTCATGTGTAACCCATCAACAACAACAACAACCACCGGTTCAGAGAACCAAGAATCTCGAACCGGACTCTTCCTCGATCTCTTCTCGATCAATAGCTTTGAACCCACAAAGAGAAATCTCCGGCATTGTGAGAACAGAGGATCTCCTCTTATGGCAGAAGCTGTAACAGAGGCGAAATCTCTCTTCACGTTAGCTTTTCCGATCGCCGTGACGGCTCTTGTCCTCTACCTACGCTCAGCCGTATCAATGTTTTTCTTGGGTCAACTTGGTGACCTCGAATTAGCCGCCGGTTCACTCGCCATTGCCTTTGCTAACATAACCGGTTACTCTGTTTTATCCGGTTTAGCTCTTGGTATGGAACCACTCTGTTCTCAAGCCTTCGGTGCTCACCGCTTCAAACTCCTTTCCCTAACCCTCCATCGAACCGTGGTTTTTCTCTTGGTTTGTTGCGTACCGATCTCGGTTCTCTGGTTTAACGTCGGCAAAATATCGGTTTACCTTCACCAAGACCCCGACATCGCGAAATTAGCTCAGACATATCTCATCTTCTCCCTACCTGATCTTCTCACCAACACTCTTCTTCATCCAATCAGAATCTACCTTCGTGCTCAAGGCATCATTCACCCCGTAACCCTAGCTTCTCTCTCCGGCGCTGTTTTTCACCTCCCGGCTAATCTTTTCTTAGTCTCTTACCTCCGTCTTGGTTTAACCGGCGTAGCAGTCGCTTCCTCCATCACAAACATCTTCGTCGTTGCTTTCCTCGTTTGCTACGTCTGGGCGAGTGGTCTTCACGCGCCTACATGGACTGACCCGACCCGTGATTGTTTCCGCGGGTGGGCTCCGTTGCTGCGTCTCGCGGGACCAAGCTGTGTCTCCGTGTGTTTGGAATGGTGGTGGTACGAGATCATGATCGTTTTGTGTGGTTTGCTCGTGAATCCAAGATCGACGGTGGCTGCTATGGGCGTTTTGATCCAGACGACGTCGTTTCTTTATGTTTTCCCGTCTTCTCTTAGCTTTGCTGTCTCAACTAGAGTCGGAAACGAACTTGGAGCCAACCGTCCCAAGACAGCAAAGCTAACGGCTACGGTGGCTATCGTTTTCGCGGCGGTTACAGGGATTATAGCGGCGGCGTTTGCTTACTCAGTCAGAAACGCTTGGGGAAGGATTTTCACCGGAGACAAAGAGATACTCCAGCTAACAGCGGCGGCGTTACCGATATTAGGTCTATGCGAGATCGGAAACTGTCCTCAGACGGTGGGATGCGGCGTCGTGAGAGGAACAGCACGACCGTCAACGGCGGCGAACGTGAACCTTGGAGCGTTTTATCTGGTGGGCATGCCGGTGGCAGTGGGTCTCGGGTTTTGGGCCGGAATTGGGTTTAATGGGCTTTGGGTAGGACTACTTGCGGCGCAGATTAGCTGCGCAGGTCTTATGATGTACGTGGTGGGGACCACAGATTGGGAATCGGAGGCTAAGAAGGCGCAGACGCTAACGTGCGCTGAGACTGTAGAGAATGATATTATTAAGGCGGTGGTGGCGAGTACTATAGACGGTGAGTGCGATGAGGCTGAGCCGTTGATTCGCATCACGGTGCTTTATTAATATTAATTAAGACAAAACAAAACAAAATTATAATCATCATAATTATTCCCATCTCTTTTCCATAGAAGGAGAAAGTTTTGCCTTTCTTTGAGAAATTTAACATTTTCTTCTTTTTTTGTACTTAAAAATTTCTTTTTTTTTATCTCCTTATTTTTTCCGATGCCCTTATGATTGGCCGTTTATATGGAGTATCTATGAGTTTTTTTTTTATAAACTACTACATATGCTAAATACTTGAATAAACTCACATGAATGCAAAAAAATAATCACATGATTTTTTTTTTGCTCACAACTAAACATTTAATTACACCCAATCTGAGACAAAAGATGTTGGGACCATATAGCTGGAGCGACAGAGAATTAATTCAAAATAATTTTTGAAATGTTTTTGTAAGTTAATAAGATAATATGGAGAGAAGAATTCACTGTTGAATTGTAGAGACTTATTA
CDS Sequence
Protein Sequence