Information report for AT4G29080
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0005515 — enables — protein binding
- GO:0005634 — located in — nucleus
- GO:0009733 — acts upstream of or within — response to auxin
- GO:0042802 — enables — identical protein binding
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0003700 — enables — DNA-binding transcription factor activity
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Genetics of Aux/IAA and ARF action in plant growth and development. DOI: NA ; PMID: 12036262
- The water-water cycle is essential for chloroplast protection in the absence of stress. DOI: 10.1074/jbc.M304987200 ; PMID: 12885779
- Functional genomic analysis of the AUXIN/INDOLE-3-ACETIC ACID gene family members in Arabidopsis thaliana. DOI: 10.1105/tpc.105.036723 ; PMID: 16284307
- The Arabidopsis Aux/IAA protein family has diversified in degradation and auxin responsiveness. DOI: 10.1105/tpc.105.039172 ; PMID: 16489122
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The Tobacco mosaic virus replicase protein disrupts the localization and function of interacting Aux/IAA proteins. DOI: 10.1094/MPMI-19-0864 ; PMID: 16903352
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- Cryptochrome 2 competes with COP1 substrates to repress COP1 ubiquitin ligase activity during Arabidopsis photomorphogenesis. DOI: 10.1073/pnas.1909181116 ; PMID: 31822614
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: A0A178V3Y7
- EMBL: CACRSJ010000109, CACSHJ010000095, LR881469
- AlphaFoldDB: A0A178V3Y7
- EnsemblPlants: AT4G29080.1
- Gramene: AT4G29080.1
- KEGG: ath:AT4G29080
- Orthologous matrix: PCLYVKV
- ExpressionAtlas: AT4G29080
- InterPro: IPR003311, IPR033389, IPR053793
- PANTHER: PTHR31734, PTHR31734:SF157
- SUPFAM: SSF54277
- PROSITE: PS51745
- Gene3D: 3.10.20.90
- OrthoDB: A0A178V3Y7
- SWISS-MODEL: A0A178V3Y7
Sequences
cDNA Sequence
- >AT4G29080.1
CTTTTTATCATTTCTCATTTTCACTCACAATTTGATCTCATCTTTAAATTTTTTTGTTTCCCATTTCTCTCAGAAAGTGTTCTGTTCTTTTTTTCTTTTGTAATCACTAAATGCTTCAAAAGTTTGTCCACAATTATATTTGAAAAAAATGTCTGTATCTGTAGCAGCAGAGCATGATTACATAGGTTTGTCAGAGTTTCCAACCATGGAAGCAACAACAATGTCTGACAAAACCAAAACCAGAGACAATAACAACGGTCTCAATTTCAAGGCTACCGAGTTAAGACTCGGTTTACCCGGTTCTGAGTCGCCGGAGCGAGTCGACTCAAGATTCTTGGCTCTCAACAAGAGTAGCTGTCCCGTGTCAGGTGCCAAAAGGGTGTTCTCCGACGCTATTAACGACTCTAACAAATGGGTCTTCTCTCCTGGATCCACTACTGCTACTGGTGATGTCGGCTCGGGTTCTGGTCCCCGTACCTCCGTCGTTAAAGATGGAAAGTCGACAACTTTCACTAAACCGGCTGTTCCGGTTAAGGAGAAGAAGAGCTCTGCTACAGCTCCAGCTTCAAAAGCACAAGTGGTGGGATGGCCACCAATAAGATCATTCAGGAAGAACTCAATGGCTTCTTCTCAATCTCAGAAACCTGGTAATAACTCAGAGACTGAAGAAGCAGAAGCTAAGTCTGGACCAGAACAACCTTGCTTGTATGTCAAAGTGAGTATGGAAGGTGCTCCTTACTTGAGGAAAATCGATCTCAAGACTTACAAAAGCTACCTTGAGCTCTCTTCTGCTCTTGAGAAGATGTTCAGTTGCTTCACCATTGGTCAGTTTGGTTCTCATGGAGGGTGTGGCAGAGATGGGTTAAACGAGAGTCGCTTGACTGATCTCTTGCGTGGTTCTGAGTATGTTGTAACCTATGAAGATAAAGACAGTGACTGGATGCTGGTCGGAGATGTCCCTTGGGAAATGTTTATATGCTCCTGCAAGAAGCTGAGAATCATGAAGAGCTCTGAGGCTATCGGCTTAGCTCCAAGGGTGATGGAGAAGTGCAGAAGCAGGAACTAGGAAAAGCCCTTTTATGTGATAATATATGATTTGAAAAAATATGTTTTTAAGAAATTGAATAGCCATTTTGTTTTGAAGTATTCTTGTGTGTTTGTGTGCTAGGAGTGATGTTTGATCTTTCTTAAACCAGCCTCTACTAAGCTCTAATAAGGCCTCTTCCTCTTACTTCTTTCTCTAATCAATCTAATGAAACATATGGGTTTGTGTATGTGTGTTTGCCAAGGAAGACTTCATAATTCATATGTATAAAAGTTTTGGTAGTGTGTAAACCGGATGTGGTTTTCATTGTTATATATGTTTTGGATGCAAACTTTACTATAGAAAATAGTTTTTCTAGTTCATGAGTTTCCATGAAATGAAGTTATAATG
CDS Sequence
Protein Sequence