Gene Details:
- Gene ID: AT4G29000
- Gene Symbol: TCX5
- Gene Name:
- Description: Tesmin/TSO1-like CXC domain-containing protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Conservation of noncoding microsatellites in plants: implication for gene regulation. DOI: 10.1186/1471-2164-7-323 ; PMID: 17187690
- The conserved cysteine-rich domain of a tesmin/TSO1-like protein binds zinc in vitro and TSO1 is required for both male and female fertility in Arabidopsis thaliana. DOI: 10.1093/jxb/erm215 ; PMID: 18057042
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- DREAM complex suppresses DNA methylation maintenance genes and precludes DNA hypermethylation. DOI: 10.1038/s41477-020-0710-7 ; PMID: 32661276
- The DREAM complex represses growth in response to DNA damage in Arabidopsis. DOI: 10.26508/lsa.202101141 ; PMID: 34583930
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Sequences:
cDNA Sequence
- >AT4G29000.1
ATGTTAGAGAGAGGGAGGAGGAGAGATGGTGTGAGAGAAGAAGAAGAACAAAACCGAAAGTATTTTTTTGTGCTTTTAATTTTTGTTTTTAATTTTACCAAATTCCTCTGAGGGCTTCTTCTTCTTCTTCTCCGTCTTCTTCTTCTTCTTCTTCTTCGTTTAGAGCTAAAACCCAATAGAACCCTAATTCTCATCTCCCTTAAAGCTTATCCCTTTTCTCTCTCTATATATATACGCGGATCAAATTCAAAGTCTCAGTTTTTGAGCTTTCTTAACAGCCGCCGAATCGATTTGTGATTTTCCCGCTCCGGAGAGATTCGGATCTGGATTTTTCGAGCTGATTTGTAGGAATTTCTCGTTTTCTCGCGGTGAATTATATCAACTGTGGAAAAAAGGAAAATTTCTGGGTTTTTTTGGTTTTGGAGATTGGAAAATCTTTGAGAGATGGGTGAAGACGGCGGAGGAGGCGAATTCCCGCCAAAAAAGGACGGTGTTGAAGAGGGTTTTCCGACGAAGAAGCCAGCAAGGCAGCTCGACTTCACTGGTGGCTCCGATGAACATTCACTGTCTAAACCAGCGGCTCCTACCGTCGTAGCTACGTCGGTGAAACCCATCATTAGTAGCTCTGTCCCTTCGACGATACGGCCGGGTATGACCATAGCAATCGGTCAGGTTACTCAGGTACGACCGACGTTACCAATGGCGACGACGATGTCAAATCCGCCGTCACAGTCACAAATCGTTAACGCGCCAATTAGGCATCCGATACCGGAATCTCCAAAAGCTAGAGGTCCAAGGCCTAATGTGGAAGGTAGAGATGGAACCCCTCAAAAGAAGAAGCAGTGTAACTGTAAACACTCACGCTGCTTGAAATTGTACTGTGAATGCTTTGCATCCGGAACATATTGTGACGGTTGTAACTGTGTAAATTGTTTCAACAATGTTGATAATGAACCTGCTAGACGAGAAGCTGTGGAAGCAACTCTGGAGCGGAATCCATTTGCGTTCAGGCCTAAAATTGCTAGCAGTCCACATGGTGGGCGGGATAAAAGGGAGGATATCGGTGAAGTTGTGTTGTTAGGGAAACATAACAAAGGATGCCACTGCAAAAAATCAGGATGCCTTAAGAAGTATTGCGAGTGCTTTCAAGCAAATATTCTTTGTTCCGAGAACTGCAAATGCTTGGATTGCAAGAACTTTGAAGGAAGTGAAGAGAGACAAGCTTTGTTTCACGGTGAACATTCCAACCACATGGCTTATCTTCAACAAGCAGCAAATGCAGCCATTACTGGAGCTGTTGGTTCCTCCGGCTTTGCTCCTTCTCCAGCACCTAAGAGAAGGAAAGGTCAAGAGATTTTGTTCAACCAAGCAATTAAAGATTCATCTAGGCTTAGCCACTTTCCACAGGTAAATAATGGAAGAACTGGTGGACCAACCTCAGGCACATCTCCATCACCTGTTTCTCGTGCTGGTGGCAATGCATCGTCAGTTCCATCAAAGTTTGTATACAGGTCCCTTTTAGCAGATATAATCCAACCACATGATGTGAGAGCACTTTGCTCTGTTTTAGTCACTGTAGCCGGAGAAGCAGCAAAGACATCAACAGATAAAAGAAATGAAATAGAAAATCGGGTGGACGATCAAACAGAAACTTCTTTAGCTTCTTCTGCACAAGATCAGCCTCAAGGCAATAACAATGCAGCTGATGTGGAGATGGTTGCAACTGATCATAATCAAGCTGATAAGTCTGGACCAGAGGAATCCAATTCAGATGGTGTTGATGCCTCTAAAGTGACCCCGCTATCTCCAGCAACTTTGGCTTTGATGTGCGATGAACAAGACACTATCTTCATGGTGGCTGCACCTTCACCTAATGGCTCAGTCGATCCCAATGGCTGCAGACCAAACTCACAGGGCCAGTCAGAAATTTACGCAGAGCAGGAGAGACTGGTGTTAACCAAATTCAGAGACTGCCTTAATCGACTTATCTCTTACGCAGAAATAAAAGAATCAAAGTGTTTATCTTTAGCAAGAATGCACATACAGCCACCTGCAATCGCGACTGTAAAAACCGAGAATGGGATTCAACAGCAAGTACCAATTGTGAATGGAGCTTCGCGAACCAATTGTCAACCTACACTCAACAAACCGCAGCCTATGCAGCTGATGAACACAACATCAGCAGCACCAGCAACAGCAACAAACACTCAACATCTTCAAAAACCTCCAGCTTTATCAGAGAAGAAAGACCCCTGAATCAGATAGATTATTATACTCTACTTAGGACAGAAAATAACTTACCAGAGAGAGCACGCTGAAATCTGCCTCACCACCGCCCTATATTATCAGGTAATCCCACCGTAATTTTTCTTTCTCAGTGGCGGTTGTTGCGGCTTCAACGCATTGGCAGGTGATTAGAGAGAGTAATAGACACAAGCTTTTATTGTGTCGTTAAGCTTTCTTCTCACTTTTCTCTTTCTTTTCTTATAAAGTCTCCTCTTTAAAGCCCCTTGTGGCTGGTGTAGATTTTGGTGAGCTTTGTTTCTTTACTACACGAATTTTTTGTTAGTTTTTTTTTTGTGTTCAGTATCACTTTTTATGTTGATGGTTTAGCTGTGGAACACCCTTGTTTACTGTGTCGGATTATGATCTGAGATGTTTCTCAATCAGCTTCTGTAGGATTTGAAAGTAATATATAATAAATCCTTAATTTGATTATA
CDS Sequence
Protein Sequence